CN189593

Overview
NameCN189593
Unique NameCN189593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189593 vs. ExPASy Swiss-Prot
Match: YAB9_SCHPO (Uncharacterized membrane protein C2G11.09 OS=Schizosaccharomyces pombe GN=SPAC2G11.09 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = -2 
Query:  456 PGDLGYGTRVPSDMLIVTIVFCYSCIAPLIIPFGVVYFALGWLILRNQALKVYVPAYESYGRMWPHMFLRLVAALLLYQITMLGYFGSKK 725
            P     G  +P  M I+ I  CYS I+PLI+ FG++YF +G+L+ + + +        S G +W  +FLR++   ++ Q+TM+G    +K
Sbjct:  626 PDSFSVGIFLPQPMFIMLICLCYSIISPLILVFGLIYFIIGFLVYKYELIYQMEHPQHSTGELWSTIFLRMIFGCVIMQLTMMGLMSLRK 715
The following BLAST results are available for this feature:
BLAST of CN189593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YAB9_SCHPO3.108e-1133.33Uncharacterized membrane protein C2G11.09 OS=Schiz... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0002B21_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189593 ID=CN189593; Name=CN189593; organism=Citrus sinensis; type=EST; length=732bp
CTTAGTTCTTCATTGCATGAAATCTAAAATTACAAATGCTGACCATTCTA
GCAGGTAGCAAGAAACCCTGAATAAAGACCCAGAAACAAATTATGTTACA
CAAAAACCCCTACATGAATCAACAAAGAATCTAAGTTTCAAACAAGTTCA
ACTAAAAGACTAAATACCACAAAGATCTAATGAAACTACCCACATGTACA
TCAAACAACAAATGATCCTGACCGGGAAGCTTGAGATAAAGCATCTTCAA
ACTGATCGTCATCGACCTTCTCAGAGTTCAAGCTTAGTGGGATGTAGGAT
CTGAAGATATGCTCCATGCTAGGGGTTTCCTTCAATTCACGTGAAGCCAC
TTCAAGAGCCGTGTCAGAGAAAGATTTATAGAATCTCTTTTGACAAATAT
AGACAAAGATCAAGGACAAGATAGGAAGTGGAATTAGGAATCCAACATAA
ATGAATTTCTTCGACCCAAAGTAACCAAGCATAGTAATTTGGTACAGTAG
CAGGGCAGCGACAAGGCGGAGAAACATGTGTGGCCACATTCTTCCATAGC
TCTCATATGCTGGAACATAAACTTTAAGTGCCTGATTCCTAAGGATAAGC
CATCCAAGGGCAAAGTATACAACACCAAATGGGATGATCAAAGGAGCTAT
GCAAGAGTAGCAGAAGACAATTGTGACAATAAGCATATCACTGGGAACTC
TAGTTCCATAGCCAAGATCTCCAGGAAACCCT
back to top