DR908774

Overview
NameDR908774
Unique NameDR908774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR908774 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.891e-11
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 SHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKN 108
            SHDRYF+KQIVNRV+EV+   L+DYAGDYNYYLEKN
Sbjct:  597 SHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYYLEKN 632
The following BLAST results are available for this feature:
BLAST of DR908774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AB5F_ARATH5.891e-1180.56ABC transporter F family member 5 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16902 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-14_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908774 ID=DR908774; Name=DR908774; organism=Citrus sinensis; type=EST; length=582bp
TCTCATGACCGATACTTCGTAAAGCAAATAGTTAATAGAGTAGTGGAGGT
TAAAGGCAGCAATTTACAGGACTATGCTGGTGATTACAATTATTACCTAG
AGAAAAACCTCGATGCTCGGGAAAAGGAGCTTGAACGTGAGGCAGAGCTC
GAAGAAAGGGCTCCAAAAATCAAGGCCAAATCCAAGATGTCAAAGGCTGA
GAAGGAAGCTCGGAAGAAACAGAAAATGCAGGCCTTCCAGGCAGCGAAAC
AAAAATCAAAAGGCTCGAAGAATGCAAAGAGATGGAAATGAGAGATAAAC
CCAGTATATTATGCGGAAGATAATCCATTGTAACTTAATTTTGCTGAGCA
AATTTCCAGGAAGCAGTATGGGCAATGGTGAGTCTGCAAACTAGGGGGTC
TGCTGTATAGGCATACTGATTGTAGTTAAGGGCTGAAATGGAAAAATCTT
TTGGCAGAAATTTGTGATTTTTTGCTTCCCTGGCAATTTCTGCCTCAAGA
GAGTCGAGAAGCTGTAATTTATGGCATAAACGTTATGCAACAGCATTTTA
GGGCCATTTTTAGATCTGCTTATTCCTGAATA
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