DR908766

Overview
NameDR908766
Unique NameDR908766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5A_ARATH (COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 2.231e-95
Identity = 168/193 (87.05%), Postives = 174/193 (90.16%), Query Frame = 3
Query:    3 KFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            +FQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIE+MGLMQGKTDGD IIVMDAFALPVEGTETRVNAQ DAYEYMV+YSQTNK AGRLEN VGWYHSHPGYGCWLSGIDVSTQ LNQQ QEPFLAVVIDPTRTVSAGKVEIGAFRTY +GYKPPDEP+SEYQTIPLNKIED           D+TYFK
Sbjct:   42 RFQQEKPWENDPHYFKRVKISALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAFRTYSKGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYSLDVTYFK 234          
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5B_ARATH (COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana GN=CSN5B PE=1 SV=2)

HSP 1 Score: 333.569 bits (854), Expect = 4.354e-91
Identity = 162/193 (83.94%), Postives = 173/193 (89.64%), Query Frame = 3
Query:    3 KFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            K QQEKPW +DP+YFKRV ISALALLKMVVHARSGGTIE+MGLMQGKT+GD IIVMDAFALPVEGTETRVNAQ+DAYEYMV+YSQT+K AGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG+K  D+ +SEYQTIPLNKIED           DITYFK
Sbjct:   42 KIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFK 234          
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5_XENTR (COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 4.825e-82
Identity = 147/197 (74.62%), Postives = 162/197 (82.23%), Query Frame = 3
Query:    3 KFQQE----KPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            K QQE    KPW  D HYFK  K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE  SEYQTIPLNKIED           ++TYFK
Sbjct:   34 KQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFK 230          
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 4.825e-82
Identity = 147/197 (74.62%), Postives = 162/197 (82.23%), Query Frame = 3
Query:    3 KFQQE----KPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            K QQE    KPW  D HYFK  K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE  SEYQTIPLNKIED           ++TYFK
Sbjct:   32 KQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFK 228          
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5_MOUSE (COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1 SV=3)

HSP 1 Score: 302.368 bits (773), Expect = 1.075e-81
Identity = 147/197 (74.62%), Postives = 162/197 (82.23%), Query Frame = 3
Query:    3 KFQQE----KPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            K QQE    KPW  D HYFK  KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE  SEYQTIPLNKIED           +++YFK
Sbjct:   34 KQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFK 230          
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5_HUMAN (COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1 SV=4)

HSP 1 Score: 302.368 bits (773), Expect = 1.075e-81
Identity = 147/197 (74.62%), Postives = 162/197 (82.23%), Query Frame = 3
Query:    3 KFQQE----KPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            K QQE    KPW  D HYFK  KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE  SEYQTIPLNKIED           +++YFK
Sbjct:   34 KQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFK 230          
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5_DANRE (COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 1.834e-81
Identity = 146/197 (74.11%), Postives = 162/197 (82.23%), Query Frame = 3
Query:    3 KFQQE----KPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            K QQE    KPW  D HYFK  K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE  SEYQTIPLNKIED           +++YFK
Sbjct:   32 KQQQEILAAKPWTKDHHYFKYCKLSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFK 228          
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5_DICDI (COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.314e-79
Identity = 137/193 (70.98%), Postives = 161/193 (83.42%), Query Frame = 3
Query:    3 KFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            +F Q KPW  DPHYFK VKISA+ALLKMV+HARSGG +EVMG++ GK + + +I+MD+FALPVEGTETRVNAQ +AYEYMV+Y +  KQ GRLENA+GWYHSHPGYGCWLSGIDV TQ +NQQ+ EP+L +VIDPTRTVSAGKVEIGAFRTYP+GYKPP+E  SEYQ+IPL+KIED           +ITYFK
Sbjct:   37 QFLQSKPWSKDPHYFKHVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEAYEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVSAGKVEIGAFRTYPQGYKPPNEGPSEYQSIPLSKIEDFGVHCKQYYSLEITYFK 229          
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.112e-78
Identity = 138/188 (73.40%), Postives = 158/188 (84.04%), Query Frame = 3
Query:   18 KPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            KPW  DPH+FK +KISALALLKMV+HARSGGT+EVMGLM GK + + +IVMDAFALPVEGTETRVNAQA AYEYM  Y +  K+ GR+E+AVGWYHSHPGYGCWLSGIDVSTQMLNQ +QEPF+A+V+DP RTVSAGKV +GAFRTYP+GYKPP+E  SEYQTIPLNKIED           +I+YFK
Sbjct:   40 KPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFK 227          
BLAST of DR908766 vs. ExPASy Swiss-Prot
Match: CSN5_CAEEL (COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans GN=csn-5 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.838e-73
Identity = 126/193 (65.28%), Postives = 154/193 (79.79%), Query Frame = 3
Query:    3 KFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDLVCIVNSIIHWDITYFK 581
            + +  KPW  DPHYFK++KISA+ALLKM +HA+ GG +E+MGL+QG+ D ++ I++D FALPVEGTETRVNAQA AYEYM  YS+     GR E  VGWYHSHPGYGCWLSGIDVSTQ LNQ+FQEP++A+VIDP RT+SAGKV+IGAFRTYPEGY+PPD+  SEYQ+IPL KIED           D+++FK
Sbjct:   39 EIRNAKPWDKDPHYFKQIKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTYPEGYRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFK 231          
The following BLAST results are available for this feature:
BLAST of DR908766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CSN5A_ARATH2.231e-9587.05COP9 signalosome complex subunit 5a OS=Arabidopsis... [more]
CSN5B_ARATH4.354e-9183.94COP9 signalosome complex subunit 5b OS=Arabidopsis... [more]
CSN5_XENTR4.825e-8274.62COP9 signalosome complex subunit 5 OS=Xenopus trop... [more]
CSN5_XENLA4.825e-8274.62COP9 signalosome complex subunit 5 OS=Xenopus laev... [more]
CSN5_MOUSE1.075e-8174.62COP9 signalosome complex subunit 5 OS=Mus musculus... [more]
CSN5_HUMAN1.075e-8174.62COP9 signalosome complex subunit 5 OS=Homo sapiens... [more]
CSN5_DANRE1.834e-8174.11COP9 signalosome complex subunit 5 OS=Danio rerio ... [more]
CSN5_DICDI1.314e-7970.98COP9 signalosome complex subunit 5 OS=Dictyosteliu... [more]
CSN5_DROME1.112e-7873.40COP9 signalosome complex subunit 5 OS=Drosophila m... [more]
CSN5_CAEEL1.838e-7365.28COP9 signalosome complex subunit 5 OS=Caenorhabdit... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16894 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-22_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908766 ID=DR908766; Name=DR908766; organism=Citrus sinensis; type=EST; length=583bp
CCAAGTTCCAGCAAGAGAAGCCCTGGGTCAATGACCCTCACTACTTCAAG
CGCGTGAAGATCTCCGCACTCGCCCTCCTCAAGATGGTCGTCCATGCGCG
ATCCGGTGGGACCATCGAGGTCATGGGCCTTATGCAAGGCAAAACCGACG
GCGACGCCATCATTGTCATGGACGCCTTTGCTTTGCCCGTTGAAGGTACC
GAAACCAGGGTTAATGCTCAGGCCGATGCTTATGAATATATGGTCGATTA
TTCCCAAACCAACAAACAGGCCGGACGTCTGGAGAATGCTGTTGGGTGGT
ACCATTCACATCCTGGCTATGGATGCTGGCTTTCGGGTATTGATGTTTCA
ACTCAAATGCTTAATCAGCAGTTTCAGGAGCCATTTTTGGCTGTTGTGAT
TGATCCTACTAGGACTGTTTCTGCTGGGAAAGTTGAGATTGGAGCTTTCA
GGACGTATCCTGAAGGATACAAGCCTCCGGATGAACCCATCTCTGAGTAT
CAGACCATTCCTTTGAATAAGATTGAAGACTTGGTGTGCATTGTAAACAG
TATTATTCATTGGGATATTACTTATTTTAAGTC
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