CN189541

Overview
NameCN189541
Unique NameCN189541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig160 contig Csv1_Contig160:317..1007. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.250e-67
Identity = 124/230 (53.91%), Postives = 166/230 (72.17%), Query Frame = 1
Query:    1 EADLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRWNIE 687
            E DL+T SL FRLLR+ G  +SCDVF KFKD++G FKSS+ +DVQG+L LY+A+Y+ V GE ILDEAI+FTT HL   V+  DH    L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+             +WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ GRK++T++  + SI+DDTYD+Y T EEL  +T A++RW+I+
Sbjct:  108 ENDLYTTSLRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVQGLLELYQASYLRVHGEDILDEAISFTTNHLSLAVSSLDH---PLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIK 332          
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.633e-67
Identity = 122/229 (53.28%), Postives = 167/229 (72.93%), Query Frame = 1
Query:    1 EADLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRWNIE 687
            E DL+T SL FRLLR+ G  +SCDVF KFKD++G FKSS+ +DV+G+L LY+A+Y+ V GE ILDEAI+FTT HL   VA   +   L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+            ++WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ GRK++T++  + SI+DDTYD+Y T EEL  +T+A++RW+I+
Sbjct:  108 ENDLYTTSLRFRLLREHGFNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTNHLSLAVAS--LDYPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKVLLEFAKIDFNMVQLLHRKELSEISRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTKAIERWDIK 332          
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.785e-67
Identity = 123/230 (53.48%), Postives = 167/230 (72.61%), Query Frame = 1
Query:    1 EADLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRWNIE 687
            E DL+T SL FRLLR+ G  +SCDVF KFKD++G FKSS+ +DV+G+L LY+A+Y+ V GE ILDEAI+FT+ HL   VA  DH    L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+            ++WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ GRK++T++  + SI+DDTYD+Y T EEL  +T A++RW+I+
Sbjct:  108 ENDLYTTSLRFRLLREHGFHVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTSNHLSLAVASLDH---PLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKVLLEFAKIDFNMVQLLHRKELSEISRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIK 332          
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.750e-67
Identity = 123/230 (53.48%), Postives = 166/230 (72.17%), Query Frame = 1
Query:    1 EADLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRWNIE 687
            E DL+T S+ FRLLR+ G  +SCDVF KFKD++G FKSS+ +DV+G+L LY+A+Y+ V GE ILDEAI+FTT HL   VA  DH    L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+             +WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ GRK++T++  + SI+DDTYD+Y T EEL  +T A++RW+I+
Sbjct:  108 ENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHLSLAVASLDH---PLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIK 332          
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.021e-66
Identity = 122/229 (53.28%), Postives = 162/229 (70.74%), Query Frame = 1
Query:    1 EADLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRWNIE 687
            + DL+T +L FRLLR+ G  ISCD F KFKD+ G FK+SL +DVQG+L LYEA+YM V GE ILDEAI+FTT  L   +   H    L+EQ+ HAL + +R+ LPR+EAR F+S+      H  NK+LL FAK+DFN+             +WWKDLDFT KLP+ARDR+VE YFW +G YFEPQY+ GRK++T++  + SI+DDTYD+Y T +EL  +T A++RW+I+
Sbjct:  109 DTDLYTTALRFRLLREHGFDISCDAFNKFKDEAGNFKASLTSDVQGLLELYEASYMRVHGEDILDEAISFTTAQLTLALPTLH--HPLSEQVGHALKQSIRRGLPRVEARNFISIYQDLESH--NKSLLQFAKIDFNLLQLLHRKELSEICRWWKDLDFTRKLPFARDRVVEGYFWIMGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYDELIPYTNAIERWDIK 333          
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 231.876 bits (590), Expect = 2.525e-60
Identity = 113/226 (50.00%), Postives = 157/226 (69.47%), Query Frame = 1
Query:    7 DLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRWNI 684
            DL T +L FRLLRQ G  IS ++F KF+D+ G+FK SL +DV G+L+LYEA+++    + IL++A+AF+T HL+S  A  H+   L EQ+ HAL + L K +PR+E R+F+S I    +   N  LL FAKLDFN+            ++WWKDLDF T LPYARDR+VE YFW LG YFEPQY+  R ++ +   ++SI+DDT+DAYGT++EL  +T+A+QRW+I
Sbjct:  103 DLCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLES--AAPHLKSPLREQVTHALEQCLHKGVPRVETRFFISSIYD-KEQSKNNVLLRFAKLDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFWALGVYFEPQYSQARVMLVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDI 325          
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.115e-55
Identity = 105/228 (46.05%), Postives = 150/228 (65.79%), Query Frame = 1
Query:    1 EADLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRWNI 684
            E DL+T ++ FR+ RQ G K+S DVF KFKD +G+FK SL  D +GMLSL+EA++++V GE IL+EA AFT  +L+S   +  + P L   I +AL +P    +PRLEAR F+ +  +  +   N+TLL FAKLD+N             +KWWKDL+  + +PYARDR+ E++FW +  YFEP YA  R I+ ++  ++S+IDDT DAY T+EE  +  EAV RW++
Sbjct:  155 ECDLYTAAIVFRVFRQHGFKMSSDVFSKFKDSDGKFKESLRGDAKGMLSLFEASHLSVHGEDILEEAFAFTKDYLQSSAVE--LFPNLKRHITNALEQPFHSGVPRLEARKFIDLYEADIE-CRNETLLEFAKLDYNRVQLLHQQELCQFSKWWKDLNLASDIPYARDRMAEIFFWAVAMYFEPDYAHTRMIIAKVVLLISLIDDTIDAYATMEETHILAEAVARWDM 379          
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.099e-53
Identity = 109/222 (49.10%), Postives = 137/222 (61.71%), Query Frame = 1
Query:   22 SLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQDHVTPK-LAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRWNI 684
            SL FRL+RQ G  +S D+F  +KD EGRFK SL  DV G+L LYEAAYM V GE ILD+A+ FT T L  +     ++   ++ QI  AL +PL K LPRLEA  ++      + H  ++TLL  AKL FN             +KWWK  D    LPYAR+R VE YFW L  YFEPQY+  R  +++   I + +DDTYDAYGT EEL  FTEA+QRW+I
Sbjct:  104 SLWFRLMRQHGFFVSSDIFSTYKDKEGRFKESLEKDVHGLLELYEAAYMFVPGEGILDDALVFTRTCLDEIAKNPSLSNSAVSSQIREALTQPLHKRLPRLEALRYIPFYQQQASH--SETLLKLAKLGFNQLQSLHKKELSIISKWWKSFDVANNLPYARNRPVECYFWALAVYFEPQYSESRVFLSRFFSIQTFLDDTYDAYGTYEELEQFTEAIQRWSI 323          
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: AMS1_ARTAN (Amorpha-4,11-diene synthase OS=Artemisia annua GN=AMS1 PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 6.659e-53
Identity = 107/223 (47.98%), Postives = 140/223 (62.78%), Query Frame = 1
Query:   22 SLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQD--HVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRWNI 684
            SL FRL+R+QG  ++CDVF  +KD  G FK SL NDV+G+L LYEA  M V GE IL++A+ FT + L S++ +D     P L  +I  AL +PL K LPR+EA  ++        H  NKTLL  AKL+FN+             KWWK  D     P  RDR+VE YFW LG+ +EPQY+  R   T+   ++++IDDTYDAYGT EEL +FTEAV+RW+I
Sbjct:  104 SLWFRLMRKQGYYVTCDVFNNYKDKNGAFKQSLANDVEGLLELYEATSMRVPGEIILEDALGFTRSRL-SIMTKDAFSTNPALFTEIQRALKQPLWKRLPRIEAAQYIPFYQQQDSH--NKTLLKLAKLEFNLLQSLHKEELSHVCKWWKAFDIKKNAPCLRDRIVECYFWGLGSGYEPQYSRARVFFTKAVAVITLIDDTYDAYGTYEELKIFTEAVERWSI 323          
BLAST of CN189541 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.305e-52
Identity = 101/224 (45.09%), Postives = 142/224 (63.39%), Query Frame = 1
Query:    7 DLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEAVQRW 678
            DL+TV + F++ RQ G K+S DVFEKFKD+ G+FK  L+ D  GMLSLYEAA     GE I+DEA+AF+ +HL+ + ++   +P LA +I +AL  P  K + R+E R ++S      +   + TLL FAK+DFN+            T+W  +++F +K+ Y R R+ E Y W LGTYFEPQY+  R I T    + + +DD YDAYGT+EEL LFT+A+  W
Sbjct:  102 DLYTVGIIFQVFRQFGFKLSADVFEKFKDENGKFKGHLVTDAYGMLSLYEAAQWGTHGEDIIDEALAFSRSHLEEISSRS--SPHLAIRIKNALKHPYHKGISRIETRQYISYYEE--EESCDPTLLEFAKIDFNLLQILHREELACVTRWHHEMEFKSKVTYTRHRITEAYLWSLGTYFEPQYSQARVITTMALILFTALDDMYDAYGTMEELELFTDAMDEW 321          
The following BLAST results are available for this feature:
BLAST of CN189541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
DCS4_GOSAR1.250e-6753.91(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS2_GOSAR1.633e-6753.28(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSHI2.785e-6753.48(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
DCS1_GOSAR4.750e-6753.48(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS3_GOSAR4.021e-6653.28(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
5EAS_TOBAC2.525e-6050.00Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
CASS_RICCO7.115e-5546.05Casbene synthase, chloroplastic OS=Ricinus communi... [more]
ECS1_ARTAN5.099e-5349.10Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
AMS1_ARTAN6.659e-5347.98Amorpha-4,11-diene synthase OS=Artemisia annua GN=... [more]
HUMS_ARATH3.305e-5245.09Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189541 ID=CN189541; Name=CN189541; organism=Citrus sinensis; type=EST; length=691bp
GAGGCTGATCTCCACACCGTTTCCCTTCATTTTCGATTGCTTAGGCAGCA
AGGAATCAAGATTTCATGTGATGTGTTTGAGAAGTTCAAAGATGATGAGG
GTAGATTCAAGTCATCGTTGATAAACGATGTTCAAGGGATGTTAAGTTTG
TACGAGGCAGCATACATGGCAGTTCGCGGAGAACATATATTAGATGAAGC
CATTGCTTTCACTACCACTCACCTGAAGTCATTGGTAGCTCAGGATCATG
TAACCCCTAAGCTTGCGGAACAGATAAATCATGCTTTATACCGTCCTCTT
CGTAAAACCCTACCAAGATTAGAGGCGAGGTATTTTATGTCCATGATCAA
TTCAACAAGTGATCATTTATACAATAAAACTCTGCTGAATTTTGCAAAGT
TAGATTTTAACATATTGCTAGAGCTGCACAAGGAGGAACTCAATGAATTA
ACAAAGTGGTGGAAAGATTTAGACTTCACTACAAAACTACCTTATGCAAG
AGACAGATTAGTGGAGTTATATTTTTGGGATTTAGGGACATACTTCGAGC
CTCAATATGCATTTGGGAGAAAGATAATGACCCAATTAAATTACATATTA
TCCATCATAGATGATACTTATGATGCGTATGGTACACTTGAAGAACTCAG
CCTCTTTACTGAAGCAGTTCAAAGATGGAATATTGAGGCCG
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