DR908765

Overview
NameDR908765
Unique NameDR908765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 5.031e-95
Identity = 160/192 (83.33%), Postives = 182/192 (94.79%), Query Frame = 1
Query:    1 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAEN 576
            KLL++LLTKKN+ETGW+TPIHVDAASGGFIAPFL+PDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV+WR+K+DLPDELVFHINYLGSDQPTFTLNFSKGS QIIAQYYQ IRLGFEGYKN+M+NC+ NA+ L EG+ K GRF+I+SKDVGVP+VAFSL+DSS +TVFE+SE LR+FGWIVPAYTMP +AE+
Sbjct:  223 KLLNELLTKKNKETGWETPIHVDAASGGFIAPFLWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPDELVFHINYLGSDQPTFTLNFSKGSYQIIAQYYQLIRLGFEGYKNVMKNCLSNAKVLTEGITKMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEH 414          
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 5.031e-95
Identity = 159/192 (82.81%), Postives = 177/192 (92.19%), Query Frame = 1
Query:    1 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAEN 576
            K L+DLL +KN+ETGWDTPIHVDAASGGFIAPF+YP+LEWDFRLPLVKSINVSGHKYGLVYAG+GWVVWR KDDLPDEL+FHINYLG+DQPTFTLNFSKGSSQ+IAQYYQ IRLG+EGYKN+MENC  NA  LREGLEKTGRF I+SK++GVPLVAFSLKD+  H  FEISE LR+FGWIVPAYTMP NA++
Sbjct:  222 KRLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKDDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCQENASVLREGLEKTGRFNIISKEIGVPLVAFSLKDNRQHNEFEISETLRRFGWIVPAYTMPPNAQH 413          
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 8.032e-93
Identity = 157/192 (81.77%), Postives = 176/192 (91.67%), Query Frame = 1
Query:    1 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAEN 576
            KLL+DLL +KN+ETGWDTPIHVDAASGGFIAPFLYP+LEWDFRLPLVKSINVSGHKYGLVYAG+GWV+WR K+DLP+EL+FHINYLG+DQPTFTLNFSKGSSQ+IAQYYQ IRLG EGY+N+MENC  N   LREGLEKT RF I+SKD GVPLVAFSLKDSS HT FEIS+ LR++GWIVPAYTMP NA++
Sbjct:  222 KLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQH 413          
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.515e-91
Identity = 156/192 (81.25%), Postives = 175/192 (91.15%), Query Frame = 1
Query:    1 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAEN 576
            K L+DLL KKNEETGW+TPIHVDAASGGFIAPF+YP+LEWDFRLPLVKSINVSGHKYGLVYAG+GWVVWR  +DLP+EL+FHINYLG+DQPTFTLNFSKGSSQIIAQYYQ IRLGFEGYKN+MENC+ N   L+EG+EKT RF I+SKD GVP+VAFSLKD S H  FEISE LR+FGWIVPAYTMPA+A++
Sbjct:  221 KRLNDLLVKKNEETGWNTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRAAEDLPEELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLKDHSFHNEFEISEMLRRFGWIVPAYTMPADAQH 412          
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 3.647e-53
Identity = 100/194 (51.55%), Postives = 134/194 (69.07%), Query Frame = 1
Query:    1 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAEN 576
            K L +L+ + N++T +   IHVDAASGG  APF+ P+LEWDFRL  V SIN SGHKYGLVY GVGWV+WR K  LP+EL+F ++YLG + PT  +NFS  +SQ+I QYY F+R GF+GYK I E     A  L E +EKTG FEI++    +P+V + LK++S     ++++++ L   GW VPAY +P N EN
Sbjct:  222 KALDNLIEEYNKQTDYKVYIHVDAASGGLYAPFVEPELEWDFRLKNVISINTSGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINFSHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMYLAEEIEKTGMFEIMNDGAQLPIVCYKLKENSNRGWNLYDLADRLLMKGWQVPAYPLPKNLEN 415          
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.364e-52
Identity = 99/194 (51.03%), Postives = 133/194 (68.56%), Query Frame = 1
Query:    1 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAEN 576
            K L +L+ + N++T +   IHVDAASGG  APF+ P+LEWDFRL  V SIN SGHKYGLVY GVGWV+WR K  LP+EL+F ++YLG + PT  +NFS  +SQ+I QYY F+R GF+GYK I E     A  L + +EKTG FEI++    +P+V + LK+ S     ++++++ L   GW VPAY +P N EN
Sbjct:  222 KALDNLIEEYNKQTDYKVYIHVDAASGGLYAPFVEPELEWDFRLKNVISINTSGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINFSHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMFLAKEIEKTGMFEIMNDGSQLPIVCYKLKEDSNRGWNLYDLADRLLMKGWQVPAYPLPKNLEN 415          
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.213e-50
Identity = 92/192 (47.92%), Postives = 131/192 (68.23%), Query Frame = 1
Query:    7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAEN 576
            L++ L + N +T +   IHVDAASGGF  PF+ PD+ WDFRL  V SIN SGHKYGLVY G+GWV+W+ +  LP+EL+F ++YLG + PT  +NFS+ +S II QYY F+R GFEGY+ I +     A+ L   +E+TG F+I +    +P+V + LKD +    T++++++ L+  GW VPAY +P N EN
Sbjct:  222 LNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIYNDGSHLPIVCYKLKDDANVKWTLYDLADRLQMRGWQVPAYPLPKNLEN 413          
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEB_LISMO (Glutamate decarboxylase beta OS=Listeria monocytogenes GN=gadB PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 8.408e-50
Identity = 91/192 (47.40%), Postives = 131/192 (68.23%), Query Frame = 1
Query:    7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAEN 576
            L++ L + N +T +   IHVDAASGGF  PF+ PD+ WDFRL  V SIN SGHKYGLVY G+GWV+W+ +  LP+EL+F ++YLG + PT  +NFS+ +S II QYY F+R GFEGY+ I +     A+ L   +E+TG F+I +    +P+V + LKD +    T++++++ L+  GW VPAY +P + EN
Sbjct:  222 LNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIFNDGSHLPIVCYKLKDDANVNWTLYDLADRLQMRGWQVPAYPLPKSLEN 413          
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.434e-49
Identity = 95/193 (49.22%), Postives = 128/193 (66.32%), Query Frame = 1
Query:    7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANA 570
            LHD L K   +TG D  +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL   G GWV+WR ++ LP ELVF+++YLG    TF +NFS+ + Q+IAQYY+F+RLG EGY  +       A  L + + K G +E +     D G+P V F LKD     +T++++SE LR  GW VPA+T+   A
Sbjct:  223 LHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA 415          
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.434e-49
Identity = 95/193 (49.22%), Postives = 128/193 (66.32%), Query Frame = 1
Query:    7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANA 570
            LHD L K   +TG D  +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL   G GWV+WR ++ LP ELVF+++YLG    TF +NFS+ + Q+IAQYY+F+RLG EGY  +       A  L + + K G +E +     D G+P V F LKD     +T++++SE LR  GW VPA+T+   A
Sbjct:  223 LHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA 415          
The following BLAST results are available for this feature:
BLAST of DR908765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DCE_SOLLC5.031e-9583.33Glutamate decarboxylase OS=Solanum lycopersicum PE... [more]
DCE_PETHY5.031e-9582.81Glutamate decarboxylase OS=Petunia hybrida GN=GAD ... [more]
DCE1_ARATH8.032e-9381.77Glutamate decarboxylase 1 OS=Arabidopsis thaliana ... [more]
DCE2_ARATH1.515e-9181.25Glutamate decarboxylase 2 OS=Arabidopsis thaliana ... [more]
DCE_LACLM3.647e-5351.55Glutamate decarboxylase OS=Lactococcus lactis subs... [more]
DCE_LACLA2.364e-5251.03Glutamate decarboxylase OS=Lactococcus lactis subs... [more]
DCEB_LISIN2.213e-5047.92Glutamate decarboxylase beta OS=Listeria innocua G... [more]
DCEB_LISMO8.408e-5047.40Glutamate decarboxylase beta OS=Listeria monocytog... [more]
DCEB_SHIFL1.434e-4949.22Glutamate decarboxylase beta OS=Shigella flexneri ... [more]
DCEB_ECOLI1.434e-4949.22Glutamate decarboxylase beta OS=Escherichia coli (... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16893 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-21_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908765 ID=DR908765; Name=DR908765; organism=Citrus sinensis; type=EST; length=583bp
AAGCTTCTTCATGACCTCCTCACCAAAAAGAATGAGGAGACCGGTTGGGA
CACCCCCATTCATGTTGATGCTGCTAGCGGCGGATTTATTGCTCCTTTTC
TCTATCCAGACCTTGAATGGGATTTCCGTTTGCCACTGGTGAAGAGCATT
AATGTCAGTGGTCACAAGTACGGCCTTGTATATGCAGGTGTTGGCTGGGT
TGTCTGGAGGACCAAAGATGACTTGCCGGATGAACTTGTCTTTCACATCA
ACTACCTTGGATCTGATCAACCGACTTTCACCCTCAACTTCTCAAAAGGC
TCCAGTCAAATAATTGCTCAATATTATCAGTTTATACGGCTTGGCTTTGA
GGGTTACAAGAACATTATGGAAAATTGCATGGGGAATGCTAGAGCGCTAA
GAGAAGGATTAGAGAAAACAGGGCGCTTTGAAATTCTCTCCAAGGATGTT
GGCGTACCCTTAGTAGCCTTTTCTTTGAAGGACAGCAGCGCACACACCGT
GTTTGAGATATCCGAGGGTTTGAGAAAGTTTGGGTGGATAGTTCCGGCCT
ATACAATGCCTGCTAATGCTGAAAATGGGGGCG
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