CN189527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189527 vs. ExPASy Swiss-Prot
Match: NYC1_ORYSJ (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.116e-42 Identity = 95/174 (54.60%), Postives = 116/174 (66.67%), Query Frame = 3 Query: 210 GAYKRRYGLHMQP--------CRSFKTD-DKGENEAESELKLKKTSGFWSSLKDVIFRVNGP-----GSQSS------DEYCKAVAKVEKVFSSIAIQIGRCIVTMMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKAL 671 G +R LH +P CR+FK + D G EA S T+ K ++++ GS+S+ EY +AV K E++F S+A Q+GR ++TMMS+GVVL VGFQLSGGDSQMN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITGSTRGLGKAL Sbjct: 13 GRLRRSPELHARPYHRPSLLRCRAFKQEADNGGEEASSSPPPPTTAEARRRRKGPLYKLKAAIQGLAGSRSAAAEAYGGEYQRAVEKAEEIFFSVATQVGRYVITMMSSGVVLGVGFQLSGGDSQMNTLIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITGSTRGLGKAL 186 HSP 2 Score: 24.6386 bits (52), Expect = 1.116e-42 Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 664 KHFAREFLLSGDR 702 K AREFLLSGDR Sbjct: 184 KALAREFLLSGDR 196
BLAST of CN189527 vs. ExPASy Swiss-Prot
Match: NYC1_ARATH (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.209e-41 Identity = 98/192 (51.04%), Postives = 120/192 (62.50%), Query Frame = 3 Query: 105 TLTKPHISLQTL-HYYCFKDQQRGPCLRPASYRSGLGAYKRRYGLHMQPCRSFKTDDKGENEAESELKLKKT--SGFWSSLKDVIFRVNGPGSQSSDEYCKAVAKVEKVFSSIAIQIGRCIVTMMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKAL 671 TLTK + Q L H F+D P S L +R +++ C E + E + K++K +G W SLK + G S DEY + V +E VFSS+A+QI R IVTM STG +L +GFQLSGGDS MN+L+WYSWLGGIIIGTM GANMVLE+H +AGPRNVVITGSTRGLGKAL Sbjct: 3 TLTKIQVYPQVLEHRLFFRD--------PIRVGSRLTCRERSNRVYVHRC---------EKKVERKRKVEKFKGNGSWDSLKSGFLGFSKLGFLSKDEYNQKVENLEMVFSSVAVQIARYIVTMTSTGAILLIGFQLSGGDSSMNSLVWYSWLGGIIIGTMTGANMVLEDHYRAGPRNVVITGSTRGLGKAL 177 HSP 2 Score: 24.6386 bits (52), Expect = 1.209e-41 Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 664 KHFAREFLLSGDR 702 K AREFLLSGDR Sbjct: 175 KALAREFLLSGDR 187 The following BLAST results are available for this feature:
BLAST of CN189527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189527 ID=CN189527; Name=CN189527; organism=Citrus sinensis; type=EST; length=702bpback to top |