CN189446

Overview
NameCN189446
Unique NameCN189446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:100..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 5.749e-100
Identity = 181/216 (83.80%), Postives = 193/216 (89.35%), Query Frame = 3
Query:   57 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLT 704
            MAER LTRVHSLRERLDETL A+RNEI+ALLSRI GKGKGI +NHQLIAE E+I E  RK L +GAFGEVLR+ QEAIVLPPWVALAVRPRPGVWEYIRVNVH           YLHFKEELVDG +NGNFVLELDF+PFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHC+KGKNMMLNDRIQN+N+LQ+VLRKAEEYLT
Sbjct:    1 MAERVLTRVHSLRERLDETLVANRNEIVALLSRIIGKGKGICRNHQLIAEVEAIPEATRKKLLDGAFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVPEYLHFKEELVDGSTNGNFVLELDFDPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCYKGKNMMLNDRIQNVNALQYVLRKAEEYLT 216          
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 354.755 bits (909), Expect = 2.671e-97
Identity = 176/215 (81.86%), Postives = 192/215 (89.30%), Query Frame = 3
Query:   57 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYL 701
            MA   LTRVHSLRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+ LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVH           YLHFKEELVDG SNGNFVLELDFEPFNA+FPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLEFLR+H  KGK +MLNDRIQN ++LQHVLRKAEEYL
Sbjct:    1 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQPAEYLHFKEELVDGSSNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYL 215          
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 1.731e-96
Identity = 176/215 (81.86%), Postives = 191/215 (88.84%), Query Frame = 3
Query:   57 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYL 701
            MA   LTRVHSLRERLDETLSA+RNEILALLSRIEGKGKGILQ+HQ+IAEFE I EE+R+ LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVH           YL FKEELVDG SNGNFVLELDFEPF ASFPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLEFLR+H  KGK +MLNDRIQN ++LQHVLRKAEEYL
Sbjct:    1 MATDRLTRVHSLRERLDETLSANRNEILALLSRIEGKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEVLQPAEYLRFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYL 215          
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 2.261e-96
Identity = 174/216 (80.56%), Postives = 192/216 (88.89%), Query Frame = 3
Query:   57 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLT 704
            MA   LTRVHSLRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+ LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVH           +L FKEELVDG +NGNFVLELDFEPF ASFPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLEFLR+H +KGK +MLNDRIQN +SLQHVLRKAEEYL+
Sbjct:    1 MATERLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVENLQPAEFLKFKEELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIQNPDSLQHVLRKAEEYLS 216          
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 7.273e-95
Identity = 170/216 (78.70%), Postives = 191/216 (88.43%), Query Frame = 3
Query:   57 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLT 704
            MA   LTRVHSL+ERLDETL+A+RNEILALLSR+E KGKGILQ+HQ+IAEFE I EE+R+ LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPG+WEY+RVNVH           +L FKEELVDG +NGNFVLELDFEPF ASFPRPTL+KSIGNGV FLNRHLSAKLFHDKES+HPLLEFLR+H +KGK +MLNDRIQN +SLQHVLRKAEEYL+
Sbjct:    1 MATERLTRVHSLKERLDETLTANRNEILALLSRLEAKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGIWEYLRVNVHALVVENLQPAEFLKFKEELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVHFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIQNPDSLQHVLRKAEEYLS 216          
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.918e-87
Identity = 160/215 (74.42%), Postives = 182/215 (84.65%), Query Frame = 3
Query:   57 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYL 701
            MAER LTRVHSLRER+D TL+AHRNEIL  LSRIE  GKGIL+ H+L+AEF++I ++++  L E AF E+L++TQEAIVLPPWVALA+R RPGVWEYIRVNV+           YL FKEELVDG SNGNFVLELDFEPF ASFP+PTL+KSIGNGVEFLNRHLSAK+FHDKESM PLLEFLR H +KGK MMLNDRIQN N+LQ+VLRKAEEYL
Sbjct:    1 MAERVLTRVHSLRERVDATLAAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKNKLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYIRVNVNALVVEELSVPEYLQFKEELVDGASNGNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLEFLRAHHYKGKTMMLNDRIQNSNTLQNVLRKAEEYL 215          
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.506e-87
Identity = 163/216 (75.46%), Postives = 182/216 (84.26%), Query Frame = 3
Query:   57 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLT 704
            MAER LTRVHSLRERLD TL+AHRNEIL  LSRIE  GKGIL+ HQL+AEFESI +E++  L + AF EVL++TQEAIVLPPWVALA+R RPGVWEY+RVNV+           +L FKEELV+G SN NFVLELDFEPF ASFP+PTL+KSIGNGVEFLNRHLSAK+FHDKESM PLLEFLRVH +KGK MMLNDRIQNL +LQ VLRKAEEYLT
Sbjct:    1 MAERVLTRVHSLRERLDATLAAHRNEILLFLSRIESHGKGILKPHQLLAEFESIHKEDKDKLNDHAFEEVLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALIVEELTVPEFLQFKEELVNGTSNDNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLEFLRVHHYKGKTMMLNDRIQNLYTLQKVLRKAEEYLT 216          
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 318.161 bits (814), Expect = 2.770e-86
Identity = 154/214 (71.96%), Postives = 181/214 (84.58%), Query Frame = 3
Query:   60 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYL 701
            AER +TRVHS RERL+ETL + RNE+LALLSR+E KGKGILQ +Q+IAEFE++ E+ RK L  G F ++L++TQEAIVLPPWVALAVRPRPGVWEY+RVN+H           +LHFKEELVDG  NGNF LELDFEPFNAS PRPTL K IGNGV+FLNRHLSAKLFHDKES+ PLL+FLR+H H+GKN+ML+++IQNLN+LQH LRKAEEYL
Sbjct:    4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYL 217          
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 8.060e-86
Identity = 157/215 (73.02%), Postives = 179/215 (83.26%), Query Frame = 3
Query:   57 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYL 701
            MAER LTRVH LRER+D TL AHRNEIL  LSRIE  GKGIL+ H+L+AEF++I ++++  L E AF E+L++TQEAIVLPPWVALA+R RPGVWEY+RVNV+           YL FKEELVDG SNGNFVLELDFEPF ASFP+PTL+KSIGNGVEFLNRHLSAK+FHDKESM PLLEFLR H +KGK MMLNDRI N N+LQ+VLRKAEEYL
Sbjct:    1 MAERVLTRVHRLRERVDATLCAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKDKLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALVVEELSVPEYLQFKEELVDGASNGNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMAPLLEFLRAHHYKGKTMMLNDRIHNSNTLQNVLRKAEEYL 215          
BLAST of CN189446 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.271e-80
Identity = 148/218 (67.89%), Postives = 176/218 (80.73%), Query Frame = 3
Query:   57 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEG--AFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLT 704
            M E  LTRVHSLRER+D TL+ HRNEIL  LSRIE  GKGIL+ HQL+AE+E+IS+E++  L +G  AF EV+++TQEAIV PPWVALA+R RPGVWEY+RVNVH           YL FKEELV G S+ NFVLELDF PF ASFPRPTL+KSIGNGVEFLNRHLSAK+FH K+SMHPLLEFLR+H + GK +MLN+R+QN+N LQ +LRKA +YL+
Sbjct:    1 MGEPVLTRVHSLRERMDSTLANHRNEILMFLSRIESHGKGILKPHQLLAEYEAISKEDKLKLDDGHGAFAEVIKSTQEAIVSPPWVALAIRLRPGVWEYVRVNVHHLVVEELSVPQYLQFKEELVIGSSDANFVLELDFAPFTASFPRPTLTKSIGNGVEFLNRHLSAKMFHGKDSMHPLLEFLRLHNYNGKTLMLNNRVQNVNGLQSMLRKAGDYLS 218          
The following BLAST results are available for this feature:
BLAST of CN189446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUSY_ALNGL5.749e-10083.80Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUSY_SOYBN2.671e-9781.86Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_PHAAU1.731e-9681.86Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUSY_VICFA2.261e-9680.56Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_MEDSA7.273e-9578.70Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUS1_SOLTU1.918e-8774.42Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUS2_SOLTU2.506e-8775.46Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]
SUS1_ARATH2.770e-8671.96Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUSY_SOLLC8.060e-8673.02Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS1_DAUCA2.271e-8067.89Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N24_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189446 ID=CN189446; Name=CN189446; organism=Citrus sinensis; type=EST; length=706bp
GAGGGTTTGCTTGGTTCCTTGTGTTGCAGTTGAAGTTTTTGTTTGTCTGA
GAATCAATGGCCGAACGTGCTTTGACCCGCGTTCACAGTCTCCGCGAGCG
TTTGGATGAGACTCTCTCTGCCCACAGGAATGAAATCTTGGCCCTTTTGT
CAAGGATTGAGGGCAAGGGCAAAGGAATCTTGCAAAACCATCAACTTATT
GCTGAGTTTGAATCAATTTCTGAGGAAAACAGAAAGCATCTAACTGAGGG
TGCATTTGGTGAAGTTCTAAGAGCCACCCAGGAAGCAATTGTTTTGCCTC
CGTGGGTAGCGCTTGCCGTGCGTCCAAGGCCCGGTGTGTGGGAGTACATC
CGAGTGAATGTCCATGCCCTTGTCGTTGAGGAGCTGCTTGTAGCCGAGTA
CCTGCACTTCAAGGAGGAACTTGTCGATGGAGGCTCCAATGGCAACTTCG
TGCTTGAGTTGGATTTTGAGCCATTCAATGCCTCGTTCCCTCGCCCAACT
CTTTCAAAGTCTATTGGAAATGGTGTGGAATTCCTTAACCGCCACCTTTC
TGCGAAGCTCTTCCATGACAAGGAGAGCATGCATCCACTGCTTGAATTTC
TCCGCGTCCACTGCCACAAGGGCAAAAACATGATGCTGAATGACAGAATT
CAGAACTTGAATTCTCTTCAACATGTTCTGAGGAAGGCAGAGGAGTATCT
GACCAC
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