CN189437

Overview
NameCN189437
Unique NameCN189437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1742..2425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 4.598e-59
Identity = 111/129 (86.05%), Postives = 122/129 (94.57%), Query Frame = -2
Query:  293 TPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPGS+A KV+PEVIAE+TVR LQRT+PAAVPA+VFLSGGQSEEEAT NLNAMN+L TKKPWSLSFSFGRALQQSTLKAW+GK EN++KA+AAFL RCKANSEATLGTYKGDA LGEGA+ESLHVKDYKY
Sbjct:  230 TPGSDAKKVSPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.133e-57
Identity = 109/129 (84.50%), Postives = 121/129 (93.80%), Query Frame = -2
Query:  293 TPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPGS++PKV PEV+AEHTVRALQRT+PAAVPAVVFLSGGQSEEEAT NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW+GKEENV+ AQ A L R KANSEATLGTYKG++QLGEGA+ESLHVKDYKY
Sbjct:  231 TPGSDSPKVAPEVVAEHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.084e-55
Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = -2
Query:  293 TPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPGS+APKV PEVIAEHTVRALQRT+PAAVPAVVFLSGGQSEEEA+ NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW GK ENV+ AQ A L R KANSEATLGTYKG + LG GA+ESLHVKDYKY
Sbjct:  231 TPGSDAPKVAPEVIAEHTVRALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.611e-54
Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = -2
Query:  293 TPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPGS++ KVTPEVIAE+TVR LQRT+PAAVPAV+FLSGGQSEEEATRNLNAMN+L TKKPWSLSFSFGRALQ STLKAWAGK EN++KA+AAFL RCKANSEATLGTYKGDA       ESLHVKDYKY
Sbjct:  230 TPGSDSKKVTPEVIAEYTVRTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDA---AADTESLHVKDYKY 355          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.751e-50
Identity = 101/129 (78.29%), Postives = 111/129 (86.05%), Query Frame = -2
Query:  293 TPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPGSE+ KVTPEVIAE+TVR LQRT+P AVP V+FLSGGQSEEEAT NLNAMN+L+TKKPW+LSFS+GRALQQSTLKAW GKEENV KAQ  FL R K NSEATLG Y+G A  G  A+ESLHVKDYKY
Sbjct:  230 TPGSESKKVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.229e-48
Identity = 95/129 (73.64%), Postives = 109/129 (84.50%), Query Frame = -2
Query:  293 TPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPGS++PKV+PEVI E+TV AL+RT+PAAVP +VFLSGGQSEE+AT NLNAMN+    KPW+LSFSFGRALQQSTLK W+GK+ENV KAQ  FL RCKANSEATLG Y G +  G  A+ESLHVKDYKY
Sbjct:  230 TPGSDSPKVSPEVIGEYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.311e-41
Identity = 84/129 (65.12%), Postives = 100/129 (77.52%), Query Frame = -2
Query:  293 TPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPGS++PKV PE+IAE+TV AL+RT+P A+P +VFLSG Q EE+AT NLNAMN+L   KPW+L+FSFG ALQQS +KAWAGK ENV KAQA FL RCKAN +ATLG Y G A     A E+L V  Y+Y
Sbjct:  230 TPGSDSPKVAPELIAEYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.378e-31
Identity = 73/130 (56.15%), Postives = 89/130 (68.46%), Query Frame = -2
Query:  293 TPG-SEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 679
            TPG S A K + E I   TV AL+R +PAAVP + FLSGGQSE +AT NLNA+N ++  KPW L+FS+GRALQ S LKAW GK+EN+  AQ   L R KAN +A+LG Y G+   G  AAESL V  + Y
Sbjct:  238 TPGQSSASKASHEAIGLATVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAG-AAAESLFVAKHSY 366          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.106e-31
Identity = 68/122 (55.74%), Postives = 83/122 (68.03%), Query Frame = -2
Query:  293 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 658
            K TP  +A  TV AL+RT+PAAVP + FLSGGQSEEEA+ NLNAMNQL   +PW LSFS+GRALQ S L AW G+  N + +Q AF+ R K NS A+ G YK   Q G+ + +SL    Y Y
Sbjct:  243 KYTPLEVAMATVTALRRTVPAAVPGICFLSGGQSEEEASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASKGEYKPSGQAGQASTQSLFTASYTY 364          
BLAST of CN189437 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.037e-31
Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = -2
Query:  293 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 628
            TV ALQR +P+AVP VVFLSGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK+EN+  AQ   L R + NS A++G Y GDA     A++SL V ++ Y
Sbjct:  255 TVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
The following BLAST results are available for this feature:
BLAST of CN189437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_ORYSJ4.598e-5986.05Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR1.133e-5784.50Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA3.084e-5582.95Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE2.611e-5482.95Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL1.751e-5078.29Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA6.229e-4873.64Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH3.311e-4165.12Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_CAEEL2.378e-3156.15Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALDOB_DANRE3.106e-3155.74Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALF1_CAEEL9.037e-3158.93Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N18_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189437 ID=CN189437; Name=CN189437; organism=Citrus sinensis; type=EST; length=680bp
TTTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAATCATGTGACAAA
ATCACAGAAATTTAGCGCCATTAGGGGAACATGAAAAAAAAAACAAAAAC
AAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCG
AAGTTCCCAAGCTTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAAC
TATGAATGAGAATGTGCCAACCTAATGTTCATACCGCCATTTACTCTCAT
AAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGGGCTTAGTATTTGT
AGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCG
CCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAG
GAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCT
TGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCAT
GGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTC
CTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAG
GCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGT
GTAACTTTGGGAGCTTCAGATCCAGGGGTC
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