EY676450

Overview
NameEY676450
Unique NameEY676450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.461e-45
Identity = 93/148 (62.84%), Postives = 115/148 (77.70%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALKNPESL 636
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEFCS+  M+KTLE+Y+RCSYG+L+ + Q +KET++S++EY+KLK +        + +    LG L  KE E LE Q   SL Q+R++K    L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETS-QPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHML 147          
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 1.105e-44
Identity = 92/143 (64.34%), Postives = 112/143 (78.32%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS +M KTL++Y++CSYG+++ N++ AKE + S+ EY+KLK          + +    LG L  KE E LE+Q   SL QVR++K
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIK 143          
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.199e-44
Identity = 90/143 (62.94%), Postives = 111/143 (77.62%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FS+RGKLYEFCS+ +M KTLE+Y++CSYG+++ N++ AKE + S+ EY+KLK          + +    LG L  KE E LE+Q   SL QVR +K
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIK 143          
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.494e-41
Identity = 96/176 (54.55%), Postives = 121/176 (68.75%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQ---ASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALKNPESLGKAF*NFKGREKWLGGTQNIFKVEV 711
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS SM +TLE+Y++C+YG  + N  S +      +S +EY+KLKE         + +    LG L  KE E LE+Q  SSL Q+RAL+    L +   + + +E+ L  T    ++ +
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQ-LNDLQSKERMLTETNKTLRLRL 175          
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.951e-41
Identity = 96/176 (54.55%), Postives = 121/176 (68.75%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQ---ASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALKNPESLGKAF*NFKGREKWLGGTQNIFKVEV 711
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS SM +TLE+Y++C+YG  + N  S +      +S +EY+KLKE         + +    LG L  KE E LE+Q  SSL Q+RAL+    L +   + + +E+ L  T    ++ +
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQ-LNDLQSKERMLNETNKTLRLRL 175          
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.264e-40
Identity = 90/143 (62.94%), Postives = 109/143 (76.22%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621
            MGRG+VELK IENKINRQVTFAKRR  LLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS SM KTLEKY++C++G+ ++   S +ETQ+S +EY+KLK          + +    LG LG KE E LE+Q  SSL Q+R+ +
Sbjct:    1 MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQKCNFGSPESTIIS-RETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTR 142          
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.817e-40
Identity = 90/145 (62.07%), Postives = 105/145 (72.41%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYG--TLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCS+ SM KTLEKY++CSY        ++ +++ +AS  EY+KLK          + +    L  LG KE E LEKQ  SSL  VR  +
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTR 145          
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.817e-40
Identity = 90/145 (62.07%), Postives = 105/145 (72.41%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYG--TLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCS+ SM KTLEKY++CSY        ++ +++ +AS  EY+KLK          + +    L  LG KE E LEKQ  SSL  VR  +
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTR 145          
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 4.804e-40
Identity = 88/144 (61.11%), Postives = 109/144 (75.69%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPS-MHKTLEKYERCSYGTLQANHQSAKETQASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621
            MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+AL+IFS+RGKLYEFCSSPS M +T++KY + SY T+  N QSAK+ Q  +++Y+KLK          + +   +L  +   E EHLE+Q  +SL Q+R+ K
Sbjct:    1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPN-QSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTK 143          
BLAST of EY676450 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 8.195e-40
Identity = 88/144 (61.11%), Postives = 107/144 (74.31%), Query Frame = 1
Query:  193 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQ-ASFEEYIKLKEETGGPTALAKTIFWGKLGRLG*KEWEHLEKQRGSSLGQVRALK 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS SM KTLE+Y++C+YG  + N  + +  + +S +EY+KLK          + +    LG L  KE E LE+Q   SL Q+R+ +
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTR 144          
The following BLAST results are available for this feature:
BLAST of EY676450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
CMB1_DIACA8.461e-4562.84MADS-box protein CMB1 OS=Dianthus caryophyllus GN=... [more]
SEP1_ARATH1.105e-4464.34Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
SEP2_ARATH4.199e-4462.94Developmental protein SEPALLATA 2 OS=Arabidopsis t... [more]
SEP3_ARATH1.494e-4154.55Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
AGL9_SINAL1.951e-4154.55Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_ARADE1.264e-4062.94Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
MADS7_ORYSJ2.817e-4062.07MADS-box transcription factor 7 OS=Oryza sativa su... [more]
MADS7_ORYSI2.817e-4062.07MADS-box transcription factor 7 OS=Oryza sativa su... [more]
AGL3_ARATH4.804e-4061.11Agamous-like MADS-box protein AGL3 OS=Arabidopsis ... [more]
AGL9_PETHY8.195e-4061.11Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-G10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676450 ID=EY676450; Name=EY676450; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGGGAGTGTTCTATACTAACTCTTAAACCTAGCTATCAAAG
CAACCTGATCCCAGCTTCTTGCCCTAAACAACAAGATCTGCAGAAACAAA
ATCTACTAATTTATAATTTATTTTTTAGCCTAAAGAAACCCAAAAAAAAC
AAAAAATCATCCAGCTATCCAGCACTTGTAAGTATATTAATAATGGGAAG
GGGAAAAGTAGAGCTGAAGAGGATAGAGAACAAAATAAATCGACAGGTGA
CTTTTGCAAAGAGAAGGAATGGATTGTTAAAGAAAGCTTATGAGCTCTCA
GTTTTGTGTGATGCTGAGGTTGCTCTTATCATCTTCTCTAGCCGCGGGAA
GCTCTATGAATTCTGCAGCAGCCCTAGTATGCACAAGACACTTGAGAAGT
ATGAAAGGTGTAGTTATGGAACACTGCAAGCGAATCATCAATCAGCCAAA
GAGACGCAGGCCAGCTTCGAGGAATACATAAAACTCAAAGAAGAAACTGG
AGGCCCTACAGCACTTGCAAAGACAATTTTTTGGGGAAAATTGGGACGCT
TAGGCTAAAAGGAGTGGGAGCACCTTGAAAAACAGCGGGGAAGTTCCTTG
GGGCAAGTAAGGGCCCTCAAGAACCCGGAATCACTGGGAAAAGCTTTCTG
AAACTTCAAAGGAAGGGAGAAATGGTTGGGGGGGACCCAAAACATTTTTA
AGGTGGAGGTTGGGGGGAGAATTAAAGGGAGCTGGGGAAATTAACTCCCG
GGGGGGGAGGGTGAGGAAAAAAAAAAGATAACAAAAAAGGACACCCACAC
CGGGGGGCTCTTTGGGAGAGGGGGTTGTATTGGGGCCTTTTTATACGGAA
GAGAGGGGGGAAAAAGTGGAAAGTTTCGGGGGCAAAGAAACCCGGGGGAG
GGGAAAACGAGGAACAAGAGGGAGGGGGGGGCGGGTGGGGGCAC
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