CN189402

Overview
NameCN189402
Unique NameCN189402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.548e-44
Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = -1
Query:  277 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL-----YPSYYSFQDYLKLYGTTKFSDKVPRLESMK 702
            GTKV  YP CP PE+++GLR HTDAGGIILL QDD+V GL+  KDG+W+ +PP  N++I +N GDQ+EV++NGRY+S +HRV+ +K G+R+SIA+FYNP +DA ISPA  L      YPS+  F DY+KLY   KF  K PR E+MK
Sbjct:  159 GTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPP-LNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKETEYPSFV-FDDYMKLYAGVKFQPKEPRFEAMK 303          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.029e-43
Identity = 86/152 (56.58%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  271 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL--------YPSYYSFQDYLKLYGTTKFSDKVPRLESMKEI 702
            GTKV  YP CP P+LV+GLR HTDAGGIILL QDD V GL+  KDGEWV +PP R ++I VN GDQ+EV++NGRY+S +HRV+ + +G+R+SIA+FYNP +DA+ISPA  L+        YP +  F+DY+KLY   KF  K PR E+ K +
Sbjct:  162 GTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMR-HSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAVVAYPKFV-FEDYMKLYVRHKFEAKEPRFEAFKSM 311          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.568e-43
Identity = 86/152 (56.58%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  271 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL--------YPSYYSFQDYLKLYGTTKFSDKVPRLESMKEI 702
            GTKV  YP CP P+LV GLR HTDAGGIILL QDD+V GL+  KDGEWV +PP R ++I VN GDQ+EV++NGRY+S +HRV+ + +G+R+SIA+FYNP +DA+ISPA  L+        YP +  F+DY+KLY   KF  K PR E+ K +
Sbjct:  162 GTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMR-HSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAVVAYPKFV-FEDYMKLYVRHKFEAKEPRFEAFKSM 311          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43
Identity = 83/153 (54.25%), Postives = 110/153 (71.90%), Query Frame = -1
Query:  277 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPA-----------IKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMK 702
            GTKV  YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KDG W+ +PP R ++I VN GDQ+EV++NG+Y+S +HRV+ +K+G+R+S+A+FYNP NDA+I PA            K +YP  + F DY+KLY   KF  K PR E+MK
Sbjct:  156 GTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPK-FMFDDYMKLYANLKFQAKEPRFEAMK 306          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42
Identity = 83/150 (55.33%), Postives = 111/150 (74.00%), Query Frame = -1
Query:  277 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL------YPSY--YSFQDYLKLYGTTKFSDKVPRLESMK 702
            GTKV  YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KDGEW+ +PP  +++I +N GDQ+EV++NG+Y+S +HRV+ + +G+R+SIA+FYNP +DA ISPA  LL       P+Y  + F DY+KLY   KF  K PR E+MK
Sbjct:  156 GTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPV-HHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEKSEVSPTYPKFLFDDYMKLYSGLKFQAKEPRFEAMK 304          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42
Identity = 82/152 (53.95%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  277 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPA----------IKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMK 702
            GTKV  YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KDG+W+ +PP R ++I VN GDQ+EV++NG+Y+S +HRV+ +K+G+R+S+A+FYNP +DA+I PA           K +YP +  F DY+KLY   KF  K PR E+MK
Sbjct:  156 GTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFV-FDDYMKLYAGLKFQAKEPRFEAMK 305          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42
Identity = 82/150 (54.67%), Postives = 111/150 (74.00%), Query Frame = -1
Query:  277 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL------YPSY--YSFQDYLKLYGTTKFSDKVPRLESMK 702
            GTKV  YP CP P+L++GLR H+DAGGIILL QDD+V GL+  KDGEWV +PP  +++I +N GDQ+EV++NG+Y+S +HRV+ + +G+R+SIA+FYNP ND+ ISPA  +L       P+Y  + F DY+KLY   KF  K PR E+MK
Sbjct:  156 GTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPP-MHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKLYSGLKFQAKEPRFEAMK 304          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.259e-42
Identity = 84/153 (54.90%), Postives = 110/153 (71.90%), Query Frame = -1
Query:  277 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL-----------YPSYYSFQDYLKLYGTTKFSDKVPRLESMK 702
            GTKV  YP CP PEL++GLR HTDAGGIILL QDD V GL+  KD EW+ +PP R ++I VN GDQ+EV++NG+Y+S +HRV+ + NG+R+SIA+FYNP +DA+I PA +L+           YP +  F+DY+KLY   KF  K PR E+MK
Sbjct:  154 GTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMR-HSIVVNIGDQLEVITNGKYKSVMHRVVAQTNGNRMSIASFYNPGSDAVIFPAPELVEKEAAEKKKETYPKFV-FEDYMKLYVRQKFEAKEPRFEAMK 304          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.259e-42
Identity = 81/148 (54.73%), Postives = 109/148 (73.65%), Query Frame = -1
Query:  277 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL------YPSYYSFQDYLKLYGTTKFSDKVPRLESMK 702
            GTKV  YP CP P+L++GLR HTDAGGIILL QDD+V GL+  KD +W+ +PP R ++I VN GDQ+EV++NG+Y+S +HRV+ + +G+R+S+A+FYNP NDA+I PA  L+      YP +  F DY+KLY   KF  K PR E+MK
Sbjct:  156 GTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLIEESKQVYPKFV-FDDYMKLYAGLKFQPKEPRFEAMK 301          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.259e-42
Identity = 85/158 (53.80%), Postives = 111/158 (70.25%), Query Frame = -1
Query:  271 GTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKL--------------LYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEI 702
            GTKV  YP CP PEL++GLR HTDAGGIILL QDD+V GL+  KDGEW+ +PP R ++I VN GDQ+EV++NG+Y+S LHRV+ + +G+R+SIA+FYNP +DA+I PA  L              +YP +  FQDY+ LY   KF  K PR E+MK +
Sbjct:  160 GTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVR-HSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFV-FQDYMNLYIRKKFEAKEPRFEAMKSM 315          
The following BLAST results are available for this feature:
BLAST of CN189402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
ACCO1_BRAJU4.548e-4457.821-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO1_ORYSI5.029e-4356.581-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSJ6.568e-4356.581-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO2_SOLLC8.578e-4354.251-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO2_MALDO1.911e-4255.331-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_PETHY1.911e-4253.951-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO1_MALDO1.911e-4254.671-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO_DENCR3.259e-4254.901-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO4_SOLLC3.259e-4254.731-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO1_DORSP3.259e-4253.801-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001M21_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189402 ID=CN189402; Name=CN189402; organism=Citrus sinensis; type=EST; length=708bp
TTTTTTTTTTTTTTTTTGAATAAGTAAACTGGTTGATTTTTATAACCTTA
TTAGTATATTCATCAGTATAGATGAATGATAAACATAGGAAATAGAAAGT
GTCATTTTCATCTCCTTTAGAATTTAACAACATAACTCTTTATGCTAGTT
AAGAATTTAAAGAACATATTCTATGCAGAAAACATAACAGCATCAAACTG
ATGATCCCTTACATAGCAATCATTTAAGTAGTCGATAATTTTATGAAAGG
AGGATCTGGTGTCCATTGGCAATCTCCTTCATGGATTCAAGTCTAGGGAC
CTTGTCTGAAAACTTGGTGGTGCCGTAAAGCTTCAGGTAGTCTTGAAAAC
TGTAGTAACTGGGGTATAAGAGTTTGATAGCTGGAGAAATAATAGCATCG
TTAGCAGGATTATAGAAGGTTGCAATGGAGAGTCTGCTTCCATTCTTTTC
AGGCATGACGCGGTGCAAAGCACTTTGATACCTCCCATTACTCAAAACTT
CCACTTGGTCACCTGTGTTAACAAATATGGTGTTGTTTCTGGATGGAGGG
ATCTTTACCCACTCTCCATCTTTGAAAAATTCAAGACCTGGAACTTGGTC
ATCTTGGAGCAAGAGGATGATTCCACCCGCGTCAGTGTGTTCTCGTAGTC
CTCTGACGAGTTCCGGATAAGGACATTGAGGGTATTTTGGTACTTTTGTC
CCCACAAA
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