CX044487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCS_ARATH (Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 5.309e-58 Identity = 113/156 (72.44%), Postives = 131/156 (83.97%), Query Frame = -1 Query: 232 AKVQPSTLIPKQVGNMYTASPYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNILSVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDS--SLLAPGTYYLTEVDSMYRRFYAKKPADVTNCENGSLANGH 693 AKVQP+TLIPK+VGNMYTAS YAA ASLIH KH++L GKRVV+FSYGSG TATMFSL+L++ + PFS+SNI SVM+V GKLK+RHE+ PE FVE MKLMEHRYGAKDFVT+K+ LLAPGTYYL EVDS+YRRFY KK E+GS+ANGH Sbjct: 312 AKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMFSYGSGSTATMFSLRLNDNKPPFSISNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKDFVTTKEGIIDLLAPGTYYLKEVDSLYRRFYGKKG------EDGSVANGH 461
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCS1_BLAGE (Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 62/141 (43.97%), Postives = 87/141 (61.70%), Query Frame = -1 Query: 277 KVQPSTLIPKQVGNMYTASPYAALASLIHNKHS-ELDGKRVVLFSYGSGLTATMFSLKLS-EGRHPFSLSNILS-VMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 690 K +PS L+ QVGNMYT S Y L SL+ +K + EL GKRV LFSYGSGL ++MFSL++S + SL ++S + ++ +L RH+ PE F + M+ EH + + +L PGT+YL VDS+YRR Y + P Sbjct: 312 KTKPSLLLANQVGNMYTPSLYGGLVSLLVSKSAQELAGKRVALFSYGSGLASSMFSLRISSDASAKSSLQRLVSNLSHIKPQLDLRHKVSPEEFAQTMETREHNHHKAPYTPEGSIDVLFPGTWYLESVDSLYRRSYKQVP 452
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 61/141 (43.26%), Postives = 81/141 (57.45%), Query Frame = -1 Query: 277 KVQPSTLIPKQVGNMYTASPYAALASLI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 690 K + S + GNMYT+S Y LASL+ H+ EL G R+ FSYGSGL A+ FS ++S+ P S L SV ++ +L SR PE F E+M E Y +F D+S L PGT+YL VD M+RR YA++P Sbjct: 367 KTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEMHRRKYARRP 507
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCS2_MOUSE (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus GN=Hmgcs2 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 61/141 (43.26%), Postives = 80/141 (56.74%), Query Frame = -1 Query: 277 KVQPSTLIPKQVGNMYTASPYAALASLI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 690 K + S + GNMYT+S Y LASL+ H+ EL G R+ FSYGSGL A+ FS ++S+ P S L SV ++ +L SR PE F E+M E Y +F D+S L PGT+YL VD M+RR YA+ P Sbjct: 367 KTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEMHRRKYARCP 507
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCSA_DICDI (Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum GN=hgsA PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21 Identity = 53/134 (39.55%), Postives = 84/134 (62.69%), Query Frame = -1 Query: 289 KVQPSTLIPKQVGNMYTASPYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNILSVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFY 690 KV P+TL+ KQ+GN Y S Y+ L SL+ K ++L GKRV+ FSYGSGL A+ FS K+ + +++I+ +++ +L R PE F E + L E R+ K++V S +++ + PG++YL+ VD+ R Y Sbjct: 312 KVAPTTLLAKQLGNTYCGSTYSGLLSLLDEKSNDLVGKRVLTFSYGSGLAASAFSFKVEK-----PINHIVEKVDLKNRLAKRVRVEPEIFTEKLSLRETRHNLKNYVPSDETTNMFPGSFYLSSVDNAGIRKY 440
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCS2_BOVIN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = -1 Query: 277 KVQPSTLIPKQVGNMYTASPYAALASLI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 690 K + S + GNMYT+S Y LASL+ H+ +L G R+ FSYGSGL A+ FS ++S+ P S L S ++ +L SR PE F E+M E Y +F D + L PGT+YL VD +YRR YA++P Sbjct: 367 KTKNSLYLSTYNGNMYTSSLYGCLASLLAHHSAQDLAGSRIGAFSYGSGLAASFFSFRVSQDASPGSPLEKLVSSTSDLQKRLASRKRVSPEEFTEIMNQREQYYHKMNFSPPGDKNSLFPGTWYLERVDELYRRKYARRP 507
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCS2_PIG (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20 Identity = 58/139 (41.73%), Postives = 78/139 (56.12%), Query Frame = -1 Query: 283 KVQPSTLIPKQVGNMYTASPYAALASLIHN-KHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAK 690 K +PS + GNMYT+S Y LASL+ +L G R+ FSYGSGL A+ +SL++S+ P S L SV ++ +L SR PE F E+M E Y +F D + L PGT+YL VD +YRR YA+ Sbjct: 367 KTKPSLYLSLHNGNMYTSSLYGCLASLLSQCSAQDLAGSRIGAFSYGSGLAASFYSLRVSQDASPGSPLEKLVSSVSDLPERLASRKRVSPEEFTEIMNQREQYYHKVNFTPPGDPNSLFPGTWYLERVDELYRRKYAR 505
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCS2_HUMAN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens GN=HMGCS2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20 Identity = 58/141 (41.13%), Postives = 80/141 (56.74%), Query Frame = -1 Query: 277 KVQPSTLIPKQVGNMYTASPYAALASLI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 690 K + S + GNMYT+S Y LASL+ H+ EL G R+ FSYGSGL A+ FS ++S+ P S + L S ++ +L SR PE F E+M E Y +F D++ L PGT+YL VD +RR YA++P Sbjct: 367 KTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQHRRKYARRP 507
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCS1_PONAB (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 55/141 (39.01%), Postives = 84/141 (59.57%), Query Frame = -1 Query: 277 KVQPSTLIPKQVGNMYTASPYAALASLIHN-KHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 690 K + S L+ Q GNMYT+S Y +LAS++ +L GKR+ +FSYGSGL AT++SLK+++ P S + + S+ ++ +L SR P+ F E MKL E + +++ L GT+YL VD +RR YA++P Sbjct: 330 KTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYLVRVDEKHRRTYARRP 470
BLAST of CX044487 vs. ExPASy Swiss-Prot
Match: HMCS1_HUMAN (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 55/141 (39.01%), Postives = 84/141 (59.57%), Query Frame = -1 Query: 277 KVQPSTLIPKQVGNMYTASPYAALASLIHN-KHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 690 K + S L+ Q GNMYT+S Y +LAS++ +L GKR+ +FSYGSGL AT++SLK+++ P S + + S+ ++ +L SR P+ F E MKL E + +++ L GT+YL VD +RR YA++P Sbjct: 330 KTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYLVRVDEKHRRTYARRP 470 The following BLAST results are available for this feature:
BLAST of CX044487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044487 ID=CX044487; Name=CX044487; organism=Citrus sinensis; type=EST; length=693bpback to top |