DR908662

Overview
NameDR908662
Unique NameDR908662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:574..1172. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.293e-52
Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 328
            E+TLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD  ++ GDEIKEAA+KRESGE
Sbjct:  151 ENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAAAKRESGE 259          
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.727e-51
Identity = 104/112 (92.86%), Postives = 106/112 (94.64%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQQ 337
            E+TLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD  DD GD+IKE ASK ESGE QQ
Sbjct:  150 ENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNADDVGDDIKE-ASKPESGEGQQ 260          
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.064e-50
Identity = 102/109 (93.58%), Postives = 105/109 (96.33%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 328
            ESTLLAYKSAQDIALA+LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD AGDEIKE  SK++ GE
Sbjct:  150 ESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDIAGDEIKE-TSKQQPGE 257          
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.915e-50
Identity = 100/112 (89.29%), Postives = 106/112 (94.64%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQQ 337
            E+TLLAYKSAQDIALAEL PTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD+AI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD TDDA DEI+E  SK+ESG+ QQ
Sbjct:  149 ENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTTDDAEDEIRE-GSKQESGDGQQ 259          
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.164e-49
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 319
            ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDI ++AGDEIKEA+   E
Sbjct:  152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDINEEAGDEIKEASKAVE 257          
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.388e-49
Identity = 96/109 (88.07%), Postives = 103/109 (94.50%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 328
            EST+ AYK+AQDIALA+LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD+LGEESYKDSTLIMQLLRDNLTLWTSD  DD GDEIKEAA+ +E G+
Sbjct:  156 ESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIKEAAAPKEPGD 264          
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.196e-48
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 334
            EST++AYK+AQDIALA+LAPTHPIRLGLALNFSVFYYEILNSPD+ACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD+T+D GDE+KE ASK ++ E Q
Sbjct:  147 ESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVKE-ASKGDACEGQ 256          
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.196e-48
Identity = 97/111 (87.39%), Postives = 102/111 (91.89%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 334
            E TL AYKSAQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ DDA DEIKEAA+ + + E Q
Sbjct:  149 EHTLAAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIKEAAAPKPTEEQQ 259          
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.423e-47
Identity = 95/109 (87.16%), Postives = 101/109 (92.66%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 328
            E+TL AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ DD  DEIKEAA K ++ E
Sbjct:  150 ENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKEAAPKPDNNE 258          
BLAST of DR908662 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.423e-47
Identity = 96/109 (88.07%), Postives = 103/109 (94.50%), Query Frame = 2
Query:    2 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 328
            ESTL+AYKSA DIA AELAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFD+AI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+TD+AGDEIKE ASK +  E
Sbjct:  148 ESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIKE-ASKPDGAE 255          
The following BLAST results are available for this feature:
BLAST of DR908662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_MESCR7.293e-5293.5814-3-3-like protein OS=Mesembryanthemum crystallin... [more]
14334_SOLLC4.727e-5192.8614-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
1433A_SOYBN3.064e-5093.5814-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
14331_SOLTU8.915e-5089.2914-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
1433_LILLO1.164e-4993.4014-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14334_ORYSJ3.388e-4988.0714-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
14333_ORYSJ2.196e-4886.4914-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14332_ARATH2.196e-4887.3914-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
14335_SOLTU1.423e-4787.1614-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
14333_ARATH1.423e-4788.0714-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16790 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-33_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908662 ID=DR908662; Name=DR908662; organism=Citrus sinensis; type=EST; length=599bp
GGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAGCTG
AATTGGCCCCTACTCACCCAATAAGGCTGGGACTTGCACTCAACTTCTCT
GTTTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCTTGC
GAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTCGATACCTTGGGTGAAG
AATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAATCTG
ACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAAGGA
AGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAATGA
GTTCAGTTCATAGGATATGTATCTGTATTTTTTATCTTGTGGCTTTTATT
TTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACTGA
TAATCTTGAGTGTTGGCTGCACTTAGGGTTTATGTGTTCCAACAGATTGT
AAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATATGT
AGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAAAAA
back to top