CN189305

Overview
NameCN189305
Unique NameCN189305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10620 contig Csv1_Contig10620:182..982. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.562e-37
Identity = 100/249 (40.16%), Postives = 132/249 (53.01%), Query Frame = -3
Query:  137 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCVSHTYGLAMTEAIAS----------------------------IANAALYNMAKDDDTSYVGKQNLLVNGG 799
            GGASGIGA   +LF K+GA+VV+AD+QD LG +L  +LG     Y+HCDV+NE +V   VD  VA+FGKLD++ N    +       + +  K D E +LAVN +G FL  KHAARVM P RRG I+ T    ++            ++ Y  SK  ++G  +  A ELGR+GIRV+CVS   G+A   A A+                            IA AAL+     DD  YV  QNL V+GG
Sbjct:   24 GGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFN-NAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSV-------SGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPA-GVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALF--LASDDGRYVSGQNLRVDGG 261          
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.564e-30
Identity = 96/259 (37.07%), Postives = 130/259 (50.19%), Query Frame = -3
Query:  134 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKL----GNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCVSHTYGLAMTEAIA---------------------------------SIANAALYNMAKDDDTSYVGKQNLLVNGGF 799
            GGA+GIG S V+LFHK+GAKV I D+QD+LG  +   L      +   +IH DV  E ++ N VD  V  FG LDIL+N    L       I +   S+ E    VN  G FL  KHAARVM+P ++G I+     G      + G    P +Y G SK  +LGL + +AAELG++GIRV+CVS  Y +A   A+A                                  +ANA L+     DD+ Y+   NL+++GGF
Sbjct:   27 GGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILIN-NAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVG----GVVGGVG--PHSYVG-SKHAVLGLTRSVAAELGQHGIRVNCVS-PYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLF--LASDDSRYISGDNLMIDGGF 274          
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.049e-26
Identity = 79/189 (41.80%), Postives = 110/189 (58.20%), Query Frame = -3
Query:  242 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKF-GKLDILVNTGCNL--EYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCVSHTYGLA 799
            GGA GIG + V+LF K+GA+VVIAD+ D  G+ALA  LG Q V ++ CDVS E +V   VD  +++  G+LD+  N    L  + R   SIL    ++ + +L VN +G  L  KHAAR M PRR G I+        + A + G   +  + Y  SK  I+GL K  A EL  +G+RV+CVS  +G+A
Sbjct:   62 GGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQ-VSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIV-----SVASVAAVLG--GLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVS-PFGVA 241          
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.957e-22
Identity = 64/179 (35.75%), Postives = 99/179 (55.31%), Query Frame = -3
Query:  263 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCV 799
            GGASGIG +AVQ F    A VV+AD+ +  G+A+  K  N  + ++H D+++E    N + + V KFG LD+L+N   N        I +   S+   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L L + +A +  ++ IRV+CV
Sbjct:   12 GGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLIN---NAGIEIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVG-----GVVAWPDIPA--YNASKGGVLQLTRSMAVDYAKHNIRVNCV 180          
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.602e-21
Identity = 64/179 (35.75%), Postives = 98/179 (54.75%), Query Frame = -3
Query:  263 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCV 799
            GGASGIG +AVQ F    A VV+AD+ +  G+A+  K  N  + ++  D+++E    + V++ V  FG LD+L+N   N        I +   SD   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L L K +A +  ++ IRV+CV
Sbjct:   12 GGASGIGYAAVQAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLIN---NAGIEIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVG-----GLVAWPDIPA--YNASKGGVLQLTKSMAVDYAKHQIRVNCV 180          
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.622e-19
Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = -3
Query:  260 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKLGNQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIP-ANYYGVSKFGILGLVKGLAAELGRYGIRVDCVS 799
            GG  GIGA+  QLF +NG KVVIA++ +  G    + L  +  DV ++  DV++E  V N+V  TV  +G +D+LVN    +  +   SI + P  + E ++ VN  G ++ +++ A  M+ R  G I+    T          F + P    Y  SK G++ L   LA  L RY IRV  +S
Sbjct:   11 GGGQGIGAAIAQLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVMSVK---SIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIAST--------RAFQSEPDTEPYSASKGGLVALTHSLAVSLSRYHIRVVSIS 182          
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18
Identity = 63/180 (35.00%), Postives = 94/180 (52.22%), Query Frame = -3
Query:  263 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAE-LGRYGIRVDCV 799
            GGASGIG +AVQ F    A VV+AD+ +  G+A+  K  N  + ++  D++NE    N + + V KFG LD+L+N   N        I +   SD   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L          + ++ IRV+CV
Sbjct:   12 GGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVQTDITNEPACQNAILSAVDKFGGLDVLIN---NAGIEIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVG-----GVVAWPDIPA--YNASKGGVLQTDAFYRPSIIAKHNIRVNCV 181          
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.590e-17
Identity = 73/239 (30.54%), Postives = 106/239 (44.35%), Query Frame = -3
Query:  137 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG----TGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCV--------------SHTYGLAMTEAIASIANAALYNMAKDDDTSYVGKQNLLVNGG 799
            GGA G+GAS V+     GAKVV  D+ D  G+A+A +L +    Y+H DV+   +    VDT V  FG L +LVN   N       +I D   ++ + +L VN  G FL  +   + M    RG I+  +      GT AC           + Y  +KF + GL K  A ELG  GIRV+ +                 +  A+  A   +  + L      D++SY      +V+GG
Sbjct:   14 GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADA-ARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVN---NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC-----------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237          
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.590e-17
Identity = 73/239 (30.54%), Postives = 106/239 (44.35%), Query Frame = -3
Query:  137 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG----TGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCV--------------SHTYGLAMTEAIASIANAALYNMAKDDDTSYVGKQNLLVNGG 799
            GGA G+GAS V+     GAKVV  D+ D  G+A+A +L +    Y+H DV+   +    VDT V  FG L +LVN   N       +I D   ++ + +L VN  G FL  +   + M    RG I+  +      GT AC           + Y  +KF + GL K  A ELG  GIRV+ +                 +  A+  A   +  + L      D++SY      +V+GG
Sbjct:   14 GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADA-ARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVN---NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC-----------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237          
BLAST of CN189305 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.418e-17
Identity = 62/182 (34.07%), Postives = 92/182 (50.55%), Query Frame = -3
Query:  263 GGASGIGASAVQLFHKNGAKVVIADVQDNLGQALADKLGNQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPAN-YYGVSKFGILGLVKGLAAELGRYGIRVDCV 799
            G  SGIG  A  +F + GAKV I D+ +  G+   + + +   +  +I  DV+ + E   +V  TV  FG+LDILVN    + Y    +I +T + D +  +AVN  G FL++K+A   M  +  G I+  +           G   IP    Y VSK  +LGL + LA +   YGIRV+ V
Sbjct:   12 GAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDAE--QIVKKTVETFGRLDILVNNAGIVPYG---NIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEA--------GLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAV 180          
The following BLAST results are available for this feature:
BLAST of CN189305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
MOMAS_ORYSJ8.562e-3740.16Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH1.564e-3037.07Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE1.049e-2641.80Sex determination protein tasselseed-2 OS=Zea mays... [more]
BACC2_BACSU5.957e-2235.75Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
BACC_BACSU8.602e-2135.75Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y019_THEMA1.622e-1933.88Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
BACC_BACAM5.219e-1835.00Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
HSD_MYCTU2.590e-1730.543-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO2.590e-1730.543-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
Y325_THEMA4.418e-1734.07Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189305 ID=CN189305; Name=CN189305; organism=Citrus sinensis; type=EST; length=801bp
TTTTTTCAAATTATATCATTCAATTCTCACATAATTTTGAATTGACATAT
GAGAAAAATGAAGCTAAAAAACTCAGAAATTTTTTTCATCGATTGAAAGC
TCTCTTAGAGGGTAGGATTCACAACTCTCATCTGAATCCTCCATTGACAA
GAAGATTTTGCTTACCCACATAACTTGTATCATCATCTTTAGCCATATTG
TAAAGCGCAGCGTTTGCTATTGATGCTATCGCTTCAGTCATTGCCAAGCC
ATAAGTATGCGATACGCAATCTACTCTTATTCCATACCGTCCAAGCTCTG
CCGCTAAGCCCTTGACAAGTCCCAAGATACCAAATTTTGACACTCCATAA
TAATTAGCTGGAATATTGCAGAAACCTTCAATTTCCGCACAAGCAGTAGT
GCCCGTACCCGTTGTATACAATATGCAACCTCTGCGGCGTGGCACCATGA
CTCTTGCAGCATGCTTGGCTACTAAGAAACCACCAATTGTGTTCACAGCC
AGTAAATGTTCTAGATCAGACTTTGGGGTGTCCAAAATGCTCACGAAACC
ACGATACTCAAGATTGCATCCGGTATTGACCAGGATGTCGAGCTTTCCGA
ATTTAGCAACGGTGGTATCAACAAGATTGATGACTTCCCTTTCATTTGAT
ACATCACAATGGATGTAGCAGACATCCTGGTTGCCTAGCTTATCGGCTAG
GGCTTGGCCAAGATTATCTTGCACATCGGCTATGACAACTTTGGCTCCAT
TTTTGTGGAAAAGCTGAACCGCAGATGCTCCGATCCCGCTTGCTCCGCCA
G
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