CN189271

Overview
NameCN189271
Unique NameCN189271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.028e-29
Identity = 84/257 (32.68%), Postives = 127/257 (49.42%), Query Frame = 1
Query:    7 MSSSTIPNSFDDVTDFVV--NRGNGVTGLVDSGIQKVPERYILPPQQRFDLTKVVSQDPILIIDVSNWD-DP----EVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEV-ALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIXXXXXXXXXXXXXXDFDRDTQHTLMGSPRIY--LNYYPKCPNPELTAGVGPHSDISTITVLPQDDIG 747
            M S  +  S+D +++     +   GV GLVDSGI KVP+ ++LPP+ R    K  +     +ID+   D DP    E++  + +AS KWGFFQ++NHGIP  VL+        FF   NE + +YY   +  + V+ +     ++ V A  WRD + F Y+  N  +   +P  C + ++++ K    V                 DR      M    ++   NYYP CP PELT G   H+DI  +T+L QDD+G
Sbjct:    1 MESPRVEESYDKMSELKAFDDTKAGVKGLVDSGITKVPQIFVLPPKDR--AKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTI-FCYMAPNPPSLQEFPTPCGESLIDFSKD---VKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMG 251          
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.663e-23
Identity = 83/261 (31.80%), Postives = 116/261 (44.44%), Query Frame = 1
Query:    7 MSSSTIPNSFDDVTDFVV--NRGNGVTGLVDSGIQKVPERY-------ILPPQQRFDLTKVVSQDPILIIDVSNWDDPEVIK------SICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIXXXXXXXXXXXXXXDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLPQDDI 744
            M S+ I  SFD  ++         GV GLVDSGI K+P  +         P     DL  + +   I  ID+   D  + IK       I EA+ KWGFFQ+INHG+ L++LE + D    F   P E R   Y      + ++L ++F      A  WRD       P   +   L P +C+D ++EY K+  I+                        L G  R+  +Y+P CP P+LT G   HSD S +TVL  D+I
Sbjct:    1 MESTKIAPSFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELANPKPLPSDLLHLKT---IPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYL-SNFDLYTAAAANWRDTFYCYMAPDPPEPQDL-PEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGL-RMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNI 255          
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.171e-23
Identity = 77/256 (30.08%), Postives = 118/256 (46.09%), Query Frame = 1
Query:    7 MSSSTIPNSFDDVTDFVVNRGNGVTGLVDSGIQKVPERYILPPQQRFDLTKVVSQD-PILIIDVSNWDDPEV-----IKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMK---KAEIVIXXXXXXXXXXXXXXDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLPQDDIG 747
            +  ST+  +FD+          GV GL+D+GI ++P  +  PP          S D  I  ID+       +     ++ I +A+ KWGFFQ+INHGIP+ VLE + D    F     E +  +Y    P+  +  +++F   +  A  WRD L     P   +   L P  C + ++EY K   K   ++                D D  ++L+    +  +YYP CP P+LT G+  HSD S +T+L QD IG
Sbjct:   11 LDRSTLLKAFDETK-------TGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSSDFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFY-SRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDL-PATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLL----LLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIG 253          
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.135e-22
Identity = 67/235 (28.51%), Postives = 115/235 (48.94%), Query Frame = 1
Query:   73 GVTGLVDSGIQKVPERYILPPQQ--RFDLTKVVSQDPILIIDVSNWDDP-----EVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLE---YMKKAEIVIXXXXXXXXXXXXXXDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLPQDDIG 747
            GV G+VD+GI K+P  +I  P+   R  + +  S   I +I+++          E+++ I EAS K+GFFQI+NHGIP  V++ + D    F    ++ + +YY     ++    ++++     +A  WRD +    +  N      +P VC+D +++   Y++   +++                + D    L+    +  +YYP CP PELT G   HSD   +T+L QD IG
Sbjct:   54 GVKGIVDTGITKIPRIFIDQPKNLDRISVCRGKSDIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTMEC-IMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLI----LLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIG 283          
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.123e-22
Identity = 75/237 (31.65%), Postives = 110/237 (46.41%), Query Frame = 1
Query:   73 GVTGLVDSGIQKVPERYILPPQQRFDLTKVVSQD-----PILIIDVSNWDDPEVIK------SICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIXXXXXXXXXXXXXXDFDRDTQHTLMGSPRIYL--NYYPKCPNPELTAGVGPHSDISTITVLPQDDI 744
            GV GLVDSG+ +VP R    P  +    K +  D      I  ID+   D  + IK       I EA+ KWGFFQ+INHG+ L++LE +      F     E R ++Y        ++L ++F   +  A  WRD  S    P   +   L P +C+D ++EY K+   V+                + +  + +  S  + +  +YYP CP P+LT G   HSD S +TVL  D I
Sbjct:   25 GVKGLVDSGVSQVP-RIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYL-SNFDLFSSPAANWRDTFSCTMAPDTPKPQDL-PEICRDIMMEYSKQ---VMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQI 255          
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.720e-20
Identity = 64/235 (27.23%), Postives = 102/235 (43.40%), Query Frame = 1
Query:   76 VTGLVDSGIQKVPERYILPPQQRFDLTKVVSQDP------ILIIDVSNWD-DPEVIKSIC-----EASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIXXXXXXXXXXXXXXDFDRDTQHTLMGS-----PRIYLNYYPKCPNPELTAGVGPHSDISTITVL 729
            V  L  SGI  +P+ YI P ++   +  V  ++       +  ID+ N + D E I+  C     +AS  WG   +INHGIP  ++E +  A   FF L  E++ KY    +  +     +  +  A   LEW DY      P   +  ++WP    D +    + A+ +                 + D     +G       ++ +NYYPKCP PEL  GV  H+D+S +T +
Sbjct:    7 VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241          
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.484e-19
Identity = 57/225 (25.33%), Postives = 107/225 (47.56%), Query Frame = 1
Query:   94 SGIQKVPERYILPPQQRFDLTKVVSQDPILIIDVSNWDDP-----EVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIXXXXXXXXXXXXXXDFDRD--TQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLPQDDIG 747
            +G  K+  +++    +R  +   V  D I +I ++  DD      E+ + I EA   WG FQ+++HG+   ++ ++T  A  FF LP E + ++           +++    Q E   +WR+ +++   P  ++  + WP   +  V    + +E ++                +++  T   +    +I +NYYPKCP P+LT G+  H+D  TIT+L QD +G
Sbjct:   10 AGESKLNSKFVRDEDERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHL--QGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVG 232          
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.238e-19
Identity = 60/235 (25.53%), Postives = 104/235 (44.26%), Query Frame = 1
Query:   76 VTGLVDSGIQKVPERYILPPQQRFDLTKVVSQDP------ILIIDVSNWD-DPEVIKSIC-----EASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIXXXXXXXXXXXXXXDFDRDTQHTLMGS-----PRIYLNYYPKCPNPELTAGVGPHSDISTITVL 729
            V  L  SGI  +P+ YI P  +  ++  +  Q+       +  ID+   + D E +++ C     +A+  WG   ++NHGI  ++++ +  A  +FF LP EQ+ KY    +  +     +  +  A   LEW DY      P + +  ++WP    D +    + A+ +                 D       +G       ++ +NYYPKCP PEL  GV  H+D+S +T +
Sbjct:   11 VETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 245          
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.238e-19
Identity = 63/225 (28.00%), Postives = 108/225 (48.00%), Query Frame = 1
Query:  100 IQKVPERYILPPQQRFDLTKV---VSQDPILIIDVSNWDDPEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALW---PPVCKDEVLEYMKKAEIVIXXXXXXXXXXXXXXDFDRDT-QHTLMGSPRIYL---NYYPKCPNPELTAGVGPHSDISTITVLPQDDI 744
            I  +P  YI    ++  ++ V   V + P+  ID+S+ D+ +++  + EAS +WG FQ++NHGIP +V+  + +    FF LP E++    K           T    + +    W D+L  +  P +      W   PP  ++   EY K+ ++V+              D + ++ +    G   +YL   NYYP CP P+L  GV  H+D+S ITVL  +++
Sbjct:   16 IDTIPAEYIRSENEQPVISTVHGVVLEVPV--IDLSDSDEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVV---DNLFKYLSLGLDLEPNSFKDGAGGDDLVYLMKINYYPPCPRPDLALGVA-HTDMSAITVLVPNEV 234          
BLAST of CN189271 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19
Identity = 63/241 (26.14%), Postives = 106/241 (43.98%), Query Frame = 1
Query:   76 VTGLVDSGIQKVPERYILPPQQRFDLTKVVSQDP------ILIIDVSNWD-DPEVIK---------SICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEV---LEYMKK----AEIVIXXXXXXXXXXXXXXDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVL 729
            V  L  SGIQ +P+ YI P ++   +  V  ++       +  ID+ + + + EV++          + +A+ +WG   ++NHGI   ++  +  A  +FF LP E++ KY    +  +     +  +  A   LEW DY      P + +   +WP    D V    EY  K    A  ++              + +      L+   +I  NYYPKCP PEL  GV  H+D+S +T +
Sbjct:    9 VESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKI--NYYPKCPQPELALGVEAHTDVSALTFI 247          
The following BLAST results are available for this feature:
BLAST of CN189271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ACCH3_SOLLC2.028e-2932.681-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH1.663e-2331.801-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH1_ARATH2.171e-2330.081-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO3.135e-2228.51Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_ARATH9.123e-2231.651-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
LDOX_ARATH1.720e-2027.23Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FL3H_ARATH2.484e-1925.33Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
LDOX_MALDO4.238e-1925.53Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_EUSGR4.238e-1928.00Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
LDOX_VITVI7.228e-1926.14Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189271 ID=CN189271; Name=CN189271; organism=Citrus sinensis; type=EST; length=748bp
CGTTTAATGTCTTCTTCAACAATTCCGAACTCATTTGATGATGTCACCGA
TTTTGTAGTAAATAGAGGCAATGGAGTAACGGGTCTAGTTGATTCAGGCA
TTCAAAAAGTTCCCGAGAGATATATTCTACCTCCTCAGCAAAGATTCGAC
TTGACCAAAGTAGTTTCTCAAGACCCAATTCTCATCATCGATGTCTCAAA
TTGGGATGATCCTGAGGTCATCAAATCAATCTGCGAAGCTTCAGGTAAGT
GGGGTTTCTTTCAAATAATCAATCATGGAATTCCTCTACAGGTTCTTGAA
AATATCACGGACGCAGCTCATAGTTTCTTTGGGTTGCCAAATGAGCAAAG
GAGCAAGTATTACAAAGGAGCTTCGCCATCTGAAACTGTGTTCTTAGCAA
CAAGCTTTTCTCCTCAGGCCGAGGTGGCTTTGGAATGGAGAGATTACCTG
AGCTTCCAGTACATCCCTGGAAATGATCAGGCTTCTGCTCTATGGCCACC
AGTTTGCAAGGATGAAGTGCTAGAATACATGAAAAAGGCTGAAATTGTCA
TAAAGAATCTATTACAGGTGCTATTGCAAGGACTCAATGTGAAGGATTTT
GACAGAGACACACAACATACTCTAATGGGTTCGCCAAGAATCTACCTCAA
CTACTACCCAAAGTGTCCAAACCCAGAACTCACAGCTGGAGTAGGACCTC
ACTCCGATATATCAACCATTACTGTTCTTCCTCAAGATGATATTGGTG
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