CN189268

Overview
NameCN189268
Unique NameCN189268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length401
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13843 contig Csv1_Contig13843:48..448. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN189268 vs. ExPASy Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.633e-34
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 2 
Query:   38 MGGGNGQKSKMAREKNMEKQRAAGKGSQLESNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLKK 271
            MGGGN QKS MAR KN+EK +AAGKGSQLE+NKKAMSIQCKVCMQTFICTTSEVKC+EHAEA+HPK+D+  CFPHLKK
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 78
The following BLAST results are available for this feature:
BLAST of CN189268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH3.633e-3483.33Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189268 ID=CN189268; Name=CN189268; organism=Citrus sinensis; type=EST; length=401bp
CTTACGATTCCTGTAGCTTCTGTGGTTTGTAAAGGAAATGGGAGGCGGCA
ACGGCCAGAAATCAAAGATGGCTCGTGAGAAGAACATGGAGAAGCAGAGA
GCAGCTGGCAAGGGGAGTCAGCTGGAGTCAAACAAGAAAGCCATGTCCAT
CCAGTGCAAGGTATGCATGCAGACGTTCATTTGCACCACATCTGAGGTGA
AGTGCAAGGAACATGCCGAAGCCAGACACCCCAAATCTGATTTATTTACA
TGTTTCCCCCATTTAAAGAAATGAAAAACCAATAATTTGATTATGTATTT
GGAGATGGGTTTAAAGCCCTCGTCAGTATGTGTCTTGCTGTGGGTTAAAA
TTAGAAAGATTTTGGGAAAAAGAGGGATCCTTCCAGTCTTATCAATACCC
T
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