CN189263

Overview
NameCN189263
Unique NameCN189263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9501 contig Csv1_Contig9501:385..1099. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: MOSC2_BOVIN (MOSC domain-containing protein 2, mitochondrial OS=Bos taurus GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 64/183 (34.97%), Postives = 96/183 (52.46%), Query Frame = 3
Query:   54 GAEASNWFTNYLGKPS-RLVRYNAESETRP---VDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIR----SDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 575
            G EA+ WFT++L   + RLV++    + R    + P      ++ + DC P M+LS+ SL  LN  +++ + IN FRPNI+V GC  F ED W  + I N   + +  C RC + T++ DTGV    EP ETL+  R    S+K +  +    G IY+    +          LK+GDPV+ M
Sbjct:  161 GDEAAQWFTSFLKTDAFRLVQFEKNMKARASNEIFPSLDKNYQVAYPDCSPVMILSEASLADLNTRMEKKVKINNFRPNIVVTGCSAFEEDTWDELLIGNVEMKKILACPRCIMTTVDPDTGVIDRKEPLETLKSYRLCDPSEKSIYKSSPLFG-IYYSVEKIGS--------LKVGDPVYQM 334          
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: MOSC1_HUMAN (MOSC domain-containing protein 1, mitochondrial OS=Homo sapiens GN=MOSC1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21
Identity = 68/189 (35.98%), Postives = 102/189 (53.97%), Query Frame = 3
Query:   33 CGSALAEGAEASNWFTNYL-GKPSRLVRYNAESETRPVDPKYAAG-----EKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIRSDKVLRPNQKQQGKI-YFGQNLVWKDNLSNGKVLKLGDPVFVM 575
            CG A A+      W T++L  +P RLV +  E   RP  P   A      ++I +SD  PF++LS+ SL  LN  L++ +    FRPNI++ GC+ ++ED W  + I +   + V  C RC + T++ DTGV +  EP ETL+  R  +     +K  GK   FGQ  V    L N   +K+GDPV+++
Sbjct:  161 CGEATAQ------WITSFLKSQPYRLVHF--EPHMRPRRPHQIADLFRPKDQIAYSDTSPFLILSEASLADLNSRLEKKVKATNFRPNIVISGCDVYAEDSWDELLIGDVELKRVMACSRCILTTVDPDTGVMSRKEPLETLKSYR--QCDPSERKLYGKSPLFGQYFV----LENPGTIKVGDPVYLL 335          
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: MOSC1_XENLA (MOSC domain-containing protein 1, mitochondrial OS=Xenopus laevis GN=mosc1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20
Identity = 63/185 (34.05%), Postives = 98/185 (52.97%), Query Frame = 3
Query:   54 GAEASNWFTNYL--GKPSRLVRYNAE----SETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIR-SDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVF-VMRK 581
            G +AS W   Y    +P RLV + A+     +++  +  +   + I + D  P MLLS+ S++ALN  L++P+ +  FRP I+  GCE F+ED W  +R+     + V  C RC + T+N ++GV    EP +TLR  R SD  L+   K      FGQ       +    ++++GDPV+ V RK
Sbjct:  164 GEQASEWLATYFQSSQPYRLVHFEADVMRPRQSKKKEKLFRDKDVIAYPDASPIMLLSETSMEALNSRLEQPVSLANFRPCIVASGCEAFAEDDWDDVRLGATRLKRVMACGRCVLTTVNPNSGVITRKEPLDTLRTFRQSDSSLKEVYKNAP--LFGQYY----GVEQTGIIRVGDPVYRVTRK 342          
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: MOSC2_MOUSE (MOSC domain-containing protein 2, mitochondrial OS=Mus musculus GN=Mosc2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.016e-19
Identity = 63/183 (34.43%), Postives = 93/183 (50.82%), Query Frame = 3
Query:   54 GAEASNWFTNYLGKPS-RLVRYNAESETRPV-----DPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIRSDKVLRPNQKQ--QGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 575
            G E + WFTNYL   + RLV+++   + R          Y    ++ + DC P  L+S+ SL  LN  LK+ + +  FRPNI+V GCE F ED W  + I +   + V  C RC + T++ DTG+    EP ETL+  R   +  P+ K   Q    FG       ++     L++GDPV+ M
Sbjct:  161 GDEVAQWFTNYLKTQAYRLVQFDTSMKGRTTKKLYPSESYLQNYEVAYPDCSPVHLISEASLVDLNTRLKKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR---LCDPSVKSIYQSSPLFGMYF----SVEKLGSLRVGDPVYRM 336          
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: MOSC1_MOUSE (MOSC domain-containing protein 1, mitochondrial OS=Mus musculus GN=Mosc1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.264e-19
Identity = 58/181 (32.04%), Postives = 99/181 (54.70%), Query Frame = 3
Query:   54 GAEASNWFTNYLGKPS-RLVRYNAESE---TRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIRSDKVLRPN-QKQQGKI-YFGQNLVWKDNLSNGKVLKLGDPVFVM 575
            G +A+ W +++L   S RLV +        +R +   +   +++ +SD  PF++LS+ SL+ LN  L+  +    FRPNI++ GC  ++ED W  + I +   + V  C RC + T++ DTG++   EP ETL+  R   +  P+ Q   GK+  FGQ       L N   +++GDPV+++
Sbjct:  165 GEDAAQWVSSFLKMQSCRLVHFEPHMRPRSSRQMKAVFRTKDQVAYSDASPFLVLSEASLEDLNSRLERRVKATNFRPNIVISGCGVYAEDSWNEVLIGDVELKRVMACTRCLLTTVDPDTGISDRKEPLETLKSYR---LCDPSEQALYGKLPIFGQYFA----LENPGTIRVGDPVYLL 338          
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: MOSC2_RAT (MOSC domain-containing protein 2, mitochondrial OS=Rattus norvegicus GN=Mosc2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19
Identity = 61/183 (33.33%), Postives = 94/183 (51.37%), Query Frame = 3
Query:   54 GAEASNWFTNYLGKPS-RLVRYNAESETRPV-----DPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIRSDKVLRPNQKQ--QGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 575
            G E + WFT+YL   + RLV+++ + + R          Y    ++ + DC P  L+S+ SL  LN  L++ + +  FRPNI+V GCE F ED W  + I +   + V  C RC + T++ DTG+    EP ETL+  R   +  P+ K   Q    FG       ++     L++GDPV+ M
Sbjct:  161 GDEVARWFTSYLKTQAYRLVQFDTKMKGRTTKKLYPSESYLQNYEVAYPDCSPIHLISEASLVDLNTRLQKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR---LCDPSVKSLYQSSPLFGMYF----SVEKIGSLRVGDPVYRM 336          
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: MOSC2_MACFA (MOSC domain-containing protein 2, mitochondrial OS=Macaca fascicularis GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 54/184 (29.35%), Postives = 97/184 (52.72%), Query Frame = 3
Query:   54 GAEASNWFTNYLG-KPSRLVRYNAESE---TRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAGPEPSETLRQIRSDKVLRPNQKQQGK------IYFGQNLVWKDNLSNGKVLKLGDPVFVM 575
            G EA+ WFTN+L  +  RLV++    +   +R + P      ++ + DC P ++++  SL  LN  +++ + +  FRPNI+V GC+ F ED W  + I +   + +  C RC + T++ DTGV   +  E L  ++S ++  P++++  K      IY+    +          L++GDPV+ M
Sbjct:  161 GNEAAQWFTNFLKTEVYRLVQFETNMKGRTSRKLLPTLDQNYQVAYPDCSPLLIMTDASLVDLNTRIEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKIMACPRCILTTVDPDTGVI--DRKEPLDTLKSYRLCDPSERELYKLSPLFGIYYSVEKIGS--------LRVGDPVYRM 334          
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: MOSC1_DANRE (MOSC domain-containing protein 1, mitochondrial OS=Danio rerio GN=mosc1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.767e-17
Identity = 57/178 (32.02%), Postives = 90/178 (50.56%), Query Frame = 3
Query:   54 GAEASNWFTNYL--GKPSRLVRYNAESET-RP--VDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIRSDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVF 569
            G + S W T +L   KP RLV Y  + +  RP   +P +   +++ + D  P ML+++ S+  LN  L + + + +FRP+I+V  CE F+ED W  IRI     + V  C RC   T++ +TGV +  EP ETL+  R     +      G+ Y          +    VL +G+PV+
Sbjct:  153 GDKVSEWLTRFLEADKPVRLVHYEPDLKPQRPHEKEPLFPKDDEVAYPDAAPVMLMTEASVGDLNSRLDKDLSVFQFRPSIVVSDCEAFTEDTWDHIRIGEVELKRVIGCGRCLFTTVDPETGVFSRKEPLETLKTYRMTDPKQKTSPILGQYY---------TVRKTGVLHVGEPVY 321          
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: MOSC2_HUMAN (MOSC domain-containing protein 2, mitochondrial OS=Homo sapiens GN=MOSC2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16
Identity = 53/184 (28.80%), Postives = 96/184 (52.17%), Query Frame = 3
Query:   54 GAEASNWFTNYLGKPS-RLVRYNAESE---TRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAGPEPSETLRQIRSDKVLRPNQKQQGK------IYFGQNLVWKDNLSNGKVLKLGDPVFVM 575
            G EA+ WFTN+L   + RLV++    +   +R + P      ++ + D  P ++++  SL  LN  +++ + +  FRPNI+V GC+ F ED W  + I +   + V  C RC + T++ DTGV   +  + L  ++S ++  P++++  K      IY+    +          L++GDPV+ M
Sbjct:  161 GNEAAKWFTNFLKTEAYRLVQFETNMKGRTSRKLLPTLDQNFQVAYPDYCPLLIMTDASLVDLNTRMEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKVMACPRCILTTVDPDTGVI--DRKQPLDTLKSYRLCDPSERELYKLSPLFGIYYSVEKIGS--------LRVGDPVYRM 334          
BLAST of CN189263 vs. ExPASy Swiss-Prot
Match: YCBX_ECOLI (Uncharacterized protein ycbX OS=Escherichia coli (strain K12) GN=ycbX PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 57/204 (27.94%), Postives = 97/204 (47.55%), Query Frame = 3
Query:    9 DGVSVWEWCGSALAEGAEASNWFTNYLGK--PSRLVR-----YNAESETRPVDPKYAAGEK------IMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAGP--EPSETLRQIRSDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 575
            DG S +        + A    W T++  +  P  + +     ++ E + R V P+     K      + F+D YP++L ++ SL  L +     + + +FRPN++V G   + ED W  IRI +  F  VK C RC   T++ + G   P  EP +TL+  R+        +  G + FGQNL+ +    N  V+++GD V ++
Sbjct:   72 DGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRT-------AQDNGDVDFGQNLIAR----NSGVIRVGDEVEIL 264          
The following BLAST results are available for this feature:
BLAST of CN189263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
MOSC2_BOVIN2.418e-2134.97MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_HUMAN5.388e-2135.98MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_XENLA4.561e-2034.05MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_MOUSE1.016e-1934.43MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_MOUSE2.264e-1932.04MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_RAT6.586e-1933.33MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_MACFA9.510e-1829.35MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_DANRE2.767e-1732.02MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_HUMAN2.342e-1628.80MOSC domain-containing protein 2, mitochondrial OS... [more]
YCBX_ECOLI2.590e-1527.94Uncharacterized protein ycbX OS=Escherichia coli (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J05_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189263 ID=CN189263; Name=CN189263; organism=Citrus sinensis; type=EST; length=715bp
GCGGTGCAGACGGTGTTTCCGTATGGGAGTGGTGTGGCTCTGCACTGGCT
GAGGGAGCTGAAGCTTCAAATTGGTTTACAAATTACCTTGGGAAACCTAG
TCGGCTAGTTCGTTACAATGCAGAATCAGAAACTAGACCTGTCGATCCCA
AATATGCTGCTGGAGAGAAAATAATGTTTTCTGATTGTTATCCATTTATG
CTGTTGTCTCAGGGATCTTTGGATGCACTTAATAAGCTTCTCAAGGAGCC
TATTCCAATTAACCGTTTTCGACCAAACATCCTTGTTGATGGTTGTGAAC
CGTTTTCTGAGGACTTATGGATGGGCATCCGAATAAACAATTGCACATTT
CAAGGTGTTAAGCTGTGTGACCGCTGTAAGGTGCCAACTATCAATCAAGA
CACTGGTGTTGCTGGTCCCGAACCAAGTGAAACACTAAGGCAAATTAGGT
CAGATAAAGTTTTGCGTCCAAATCAAAAACAGCAGGGAAAGATATACTTT
GGGCAGAACTTGGTGTGGAAGGACAACCTTAGTAATGGAAAGGTGCTTAA
ACTTGGGGATCCGGTTTTTGTCATGAGGAAGGTCAATTCTGCAGCTGAGG
CAGCAGCTTGAGCTCTATTGAATATTTGTTAGTAATGCTAATGCTGTTGT
TGGGGCCAATAAATTAAACTCTGTTGTGTGTGTATCATTGTCTAGTGGAA
TAAGAAACTGGTTTG
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