CN189262

Overview
NameCN189262
Unique NameCN189262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: MOSC1_HUMAN (MOSC domain-containing protein 1, mitochondrial OS=Homo sapiens GN=MOSC1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = -3
Query:  270 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIRSDKVLRPNQKQQGKI-YFGQNLVWKDNLSNGKVLKLGDPVFVM 668
            +SD  PF++LS+ SL  LN  L++ +    FRPNI++ GC+ ++ED W  + I +   + V  C RC + T++ DTGV +  EP ETL+  R  +     +K  GK   FGQ  V    L N   +K+GDPV+++
Sbjct:  207 YSDTSPFLILSEASLADLNSRLEKKVKATNFRPNIVISGCDVYAEDSWDELLIGDVELKRVMACSRCILTTVDPDTGVMSRKEPLETLKSYR--QCDPSERKLYGKSPLFGQYFV----LENPGTIKVGDPVYLL 335          
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: MOSC2_BOVIN (MOSC domain-containing protein 2, mitochondrial OS=Bos taurus GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17
Identity = 52/138 (37.68%), Postives = 74/138 (53.62%), Query Frame = -3
Query:  270 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIR----SDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 668
            + DC P M+LS+ SL  LN  +++ + IN FRPNI+V GC  F ED W  + I N   + +  C RC + T++ DTGV    EP ETL+  R    S+K +  +    G IY+    +          LK+GDPV+ M
Sbjct:  206 YPDCSPVMILSEASLADLNTRMEKKVKINNFRPNIVVTGCSAFEEDTWDELLIGNVEMKKILACPRCIMTTVDPDTGVIDRKEPLETLKSYRLCDPSEKSIYKSSPLFG-IYYSVEKIGS--------LKVGDPVYQM 334          
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: MOSC1_MOUSE (MOSC domain-containing protein 1, mitochondrial OS=Mus musculus GN=Mosc1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16
Identity = 49/136 (36.03%), Postives = 78/136 (57.35%), Query Frame = -3
Query:  270 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIRSDKVLRPN-QKQQGKI-YFGQNLVWKDNLSNGKVLKLGDPVFVM 668
            +SD  PF++LS+ SL+ LN  L+  +    FRPNI++ GC  ++ED W  + I +   + V  C RC + T++ DTG++   EP ETL+  R   +  P+ Q   GK+  FGQ       L N   +++GDPV+++
Sbjct:  210 YSDASPFLVLSEASLEDLNSRLERRVKATNFRPNIVISGCGVYAEDSWNEVLIGDVELKRVMACTRCLLTTVDPDTGISDRKEPLETLKSYR---LCDPSEQALYGKLPIFGQYFA----LENPGTIRVGDPVYLL 338          
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: MOSC1_XENLA (MOSC domain-containing protein 1, mitochondrial OS=Xenopus laevis GN=mosc1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16
Identity = 52/138 (37.68%), Postives = 77/138 (55.80%), Query Frame = -3
Query:  264 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIR-SDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVF-VMRK 668
            + D  P MLLS+ S++ALN  L++P+ +  FRP I+  GCE F+ED W  +R+     + V  C RC + T+N ++GV    EP +TLR  R SD  L+   K      FGQ       +    ++++GDPV+ V RK
Sbjct:  211 YPDASPIMLLSETSMEALNSRLEQPVSLANFRPCIVASGCEAFAEDDWDDVRLGATRLKRVMACGRCVLTTVNPNSGVITRKEPLDTLRTFRQSDSSLKEVYKNAP--LFGQYY----GVEQTGIIRVGDPVYRVTRK 342          
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: YCBX_ECOLI (Uncharacterized protein ycbX OS=Escherichia coli (strain K12) GN=ycbX PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15
Identity = 45/135 (33.33%), Postives = 73/135 (54.07%), Query Frame = -3
Query:  270 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAGP--EPSETLRQIRSDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 668
            F+D YP++L ++ SL  L +     + + +FRPN++V G   + ED W  IRI +  F  VK C RC   T++ + G   P  EP +TL+  R+        +  G + FGQNL+ +    N  V+++GD V ++
Sbjct:  141 FADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRT-------AQDNGDVDFGQNLIAR----NSGVIRVGDEVEIL 264          
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: MOSC2_MOUSE (MOSC domain-containing protein 2, mitochondrial OS=Mus musculus GN=Mosc2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15
Identity = 50/136 (36.76%), Postives = 72/136 (52.94%), Query Frame = -3
Query:  270 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIRSDKVLRPNQKQ--QGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 668
            + DC P  L+S+ SL  LN  LK+ + +  FRPNI+V GCE F ED W  + I +   + V  C RC + T++ DTG+    EP ETL+  R   +  P+ K   Q    FG       ++     L++GDPV+ M
Sbjct:  208 YPDCSPVHLISEASLVDLNTRLKKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR---LCDPSVKSIYQSSPLFGMYF----SVEKLGSLRVGDPVYRM 336          
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: MOSC2_RAT (MOSC domain-containing protein 2, mitochondrial OS=Rattus norvegicus GN=Mosc2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14
Identity = 49/136 (36.03%), Postives = 72/136 (52.94%), Query Frame = -3
Query:  270 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIRSDKVLRPNQKQ--QGKIYFGQNLVWKDNLSNGKVLKLGDPVFVM 668
            + DC P  L+S+ SL  LN  L++ + +  FRPNI+V GCE F ED W  + I +   + V  C RC + T++ DTG+    EP ETL+  R   +  P+ K   Q    FG       ++     L++GDPV+ M
Sbjct:  208 YPDCSPIHLISEASLVDLNTRLQKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR---LCDPSVKSLYQSSPLFGMYF----SVEKIGSLRVGDPVYRM 336          
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: MOSC2_MACFA (MOSC domain-containing protein 2, mitochondrial OS=Macaca fascicularis GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.848e-13
Identity = 41/139 (29.50%), Postives = 74/139 (53.24%), Query Frame = -3
Query:  270 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAGPEPSETLRQIRSDKVLRPNQKQQGK------IYFGQNLVWKDNLSNGKVLKLGDPVFVM 668
            + DC P ++++  SL  LN  +++ + +  FRPNI+V GC+ F ED W  + I +   + +  C RC + T++ DTGV   +  E L  ++S ++  P++++  K      IY+    +          L++GDPV+ M
Sbjct:  206 YPDCSPLLIMTDASLVDLNTRIEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKIMACPRCILTTVDPDTGVI--DRKEPLDTLKSYRLCDPSERELYKLSPLFGIYYSVEKIGS--------LRVGDPVYRM 334          
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: MOSC1_DANRE (MOSC domain-containing protein 1, mitochondrial OS=Danio rerio GN=mosc1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = -3
Query:  276 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIRSDKVLRPNQKQQGKIYFGQNLVWKDNLSNGKVLKLGDPVF 668
            + D  P ML+++ S+  LN  L + + + +FRP+I+V  CE F+ED W  IRI     + V  C RC   T++ +TGV +  EP ETL+  R     +      G+ Y          +    VL +G+PV+
Sbjct:  199 YPDAAPVMLMTEASVGDLNSRLDKDLSVFQFRPSIVVSDCEAFTEDTWDHIRIGEVELKRVIGCGRCLFTTVDPETGVFSRKEPLETLKTYRMTDPKQKTSPILGQYY---------TVRKTGVLHVGEPVY 321          
BLAST of CN189262 vs. ExPASy Swiss-Prot
Match: MOSC2_HUMAN (MOSC domain-containing protein 2, mitochondrial OS=Homo sapiens GN=MOSC2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 40/139 (28.78%), Postives = 73/139 (52.52%), Query Frame = -3
Query:  270 FSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAGPEPSETLRQIRSDKVLRPNQKQQGK------IYFGQNLVWKDNLSNGKVLKLGDPVFVM 668
            + D  P ++++  SL  LN  +++ + +  FRPNI+V GC+ F ED W  + I +   + V  C RC + T++ DTGV   +  + L  ++S ++  P++++  K      IY+    +          L++GDPV+ M
Sbjct:  206 YPDYCPLLIMTDASLVDLNTRMEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKVMACPRCILTTVDPDTGVI--DRKQPLDTLKSYRLCDPSERELYKLSPLFGIYYSVEKIGS--------LRVGDPVYRM 334          
The following BLAST results are available for this feature:
BLAST of CN189262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
MOSC1_HUMAN5.737e-1737.78MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_BOVIN7.493e-1737.68MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_MOUSE2.180e-1636.03MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_XENLA3.719e-1637.68MOSC domain-containing protein 1, mitochondrial OS... [more]
YCBX_ECOLI9.159e-1533.33Uncharacterized protein ycbX OS=Escherichia coli (... [more]
MOSC2_MOUSE9.159e-1536.76MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_RAT2.041e-1436.03MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_MACFA3.848e-1329.50MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_DANRE3.258e-1232.58MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_HUMAN1.238e-1128.78MOSC domain-containing protein 2, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J05_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189262 ID=CN189262; Name=CN189262; organism=Citrus sinensis; type=EST; length=685bp
TTTTTTTTTTTTTTTGGAGGATTTGGTTGGTGGGGGAGCCAGGCCGCTGA
TTATATAAAGAAAAAAAAAAAATTTATAAACAATATCCATGTCTCTGGAA
ATGGCACCTTGCTGTGGCATAGCAAGCAACAAACCAGTTTCTTATTCCAC
TAGACAATGATACACACACAACAGAGTTTAATTTATTGGCCCCAACAACA
GCATTAGCATTACTAACAAATATTCAATAGAGCTCAAGCTGCTGCCTCAG
CTGCAGAATTGACCTTCCTCATGACAAAAACCGGATCCCCAAGTTTAAGC
ACCTTTCCATTACTAAGGTTGTCCTTCCACACCAAGTTCTGCCCAAAGTA
TATCTTTCCCTGCTGTTTTTGATTTGGACGCAAAACTTTATCTGACCTAA
TTTGCCTTAGTGTTTCACTTGGTTCGGGACCAGCAACACCAGTGTCTTGA
TTGATAGTTGGCACCTTACAGCGGTCACACAGCTTAACACCTTGAAATGT
GCAATTGTTTATTCGGATGCCCATCCATAAGTCCTCAGAAAACGGTTCAC
AACCATCAACAAGGATGTTTGGTCGAAAACGGTTAATTGGAATAGGCTCC
TTGAGAAGCTTATTAAGTGCATCCAAAGATCCCTGAGACAACAGCATAAA
TGGATAACAATCAGAAAAACATTATTTTCTCTCCA
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