CN189260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = -1 Query: 363 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYEPAA-----SQPYDRNFLPVNLLEPNHQYARQDDQPPLQLV 656 GI RVRSKKNE+L+AEIE+M+KRE++LQ++NMYLRA+I+E R G VYE SQ Y+RN++PVNLLEPN Q++ Q DQPPLQLV Sbjct: 149 GISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQ--GTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQFSGQ-DQPPLQLV 248
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.475e-19 Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = -1 Query: 363 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYEPAA-----SQPYDRNFLPVNLLEPNHQYARQDDQPPLQLV 656 GI RVRSKK+EML+AEIE+M+KREI+LQNDNMYLR++I+E G VYE S Y+RN++ VNLLEPN + Q DQPPLQLV Sbjct: 149 GISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQ----GTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNSSNQ-DQPPLQLV 246
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 52/99 (52.53%), Postives = 67/99 (67.68%), Query Frame = -1 Query: 363 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYEPAASQPYD-RNFLPVNLLEPNHQYARQDDQPPLQLV 656 GI R+RSKKNE+L AEIE+M+K+EI L N+N YLRA+I+ENERA G YE A Q +D RN++ +N L+PN+ Y+RQ DQ LQLV Sbjct: 150 GISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMP-----GSSDYELAPPQSFDGRNYIQLNGLQPNNHYSRQ-DQTALQLV 242
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18 Identity = 52/100 (52.00%), Postives = 63/100 (63.00%), Query Frame = -1 Query: 363 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYE--PAASQPYDRNFLPVNLLEPNHQYARQDDQPPLQLV 656 GI ++RSKKNE+L AEIE+M+KREI L N+N YLRA+I+E ERA G YE P Q RN+L VN L+ N+ Y RQ DQP LQLV Sbjct: 150 GISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMNLMPGSSSYELVPPPHQFDTRNYLQVNGLQTNNHYTRQ-DQPSLQLV 248
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.264e-18 Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 363 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYE--PAASQPYDRNFLPVNLLEPNHQYARQDDQPPLQLV 656 GI ++RSKKNE+L AEIE+M+KRE+ L N+N YLRA+I+E ERA + +E P Q RN+L VN L+ N+ Y RQ DQPP+QLV Sbjct: 150 GISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLMPGSSSNYHELVPPPQQFDTRNYLQVNGLQTNNHYPRQ-DQPPIQLV 248
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.472e-16 Identity = 50/100 (50.00%), Postives = 65/100 (65.00%), Query Frame = -1 Query: 363 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYE-PAASQPYD-RNFLPVNLLEPNHQYARQDDQPPLQLV 656 GI ++R+KKNE+L AEIE+M+KREI L N+N YLRA+I+E ER+ G Y+ Q +D RN+L VN L+ N+ Y RQ DQPPLQLV Sbjct: 150 GISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERSQQMNLMP------GSSSYDLVPPQQSFDARNYLQVNGLQTNNHYPRQ-DQPPLQLV 242
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16 Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = -1 Query: 366 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYEPAASQPYD-RNFLPVNLLEPNHQYARQDDQPPLQL 656 GI ++R++KNE+L AE+E+M+KRE++LQNDNMYLR+++ ENER Y+ + PYD RNFL VN+++ YA Q LQL Sbjct: 135 GIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENERG---QQPLNMMGAASTSEYDHMVNNPYDSRNFLQVNIMQQPQHYAHQLQPTTLQL 229
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 363 IGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYE------PAASQPYD-RNFLPVNLLEP-NHQY--ARQDDQPPLQLV 653 + R+RSKKNE+L AEI++M+KRE+ L NDN LRA+I+ENER GG YE QP+D RN+ V L+P NH Y A ++DQ LQLV Sbjct: 151 VNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENER-----NNPSMSLMPGGSNYEQIMPPPQTQPQPFDSRNYFQVAALQPNNHHYSSAGREDQTALQLV 252
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 9.456e-14 Identity = 50/107 (46.73%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 363 IGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYE------PAASQPYD-RNFLPVNLLEP-NHQY--ARQDDQPPLQLV 653 I R+RSKKNE+L +EI++M+KRE+ L NDN LRA+I+ENER GG YE SQP+D RN+ V L+P NH Y A + DQ LQLV Sbjct: 151 ITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENER-----NNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTALQLV 252
BLAST of CN189260 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.850e-12 Identity = 37/94 (39.36%), Postives = 58/94 (61.70%), Query Frame = -1 Query: 381 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXQGGGHVYEPAASQ-PYD-RNFLPVNLLEPNHQYARQDDQ 656 G+G++R++KNE+L AEIE+M++RE +LQNDNMYL+++++E+ER G E + YD RNFL N++ Y Q+D+ Sbjct: 176 GLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERG-----LQTVNMMGSASTSEYVQNMIHYDPRNFLQFNIMHQPQYYPEQEDR 264 The following BLAST results are available for this feature:
BLAST of CN189260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189260 ID=CN189260; Name=CN189260; organism=Citrus sinensis; type=EST; length=656bpback to top |