CN189256
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 4.553e-53 Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = -2 Query: 229 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 567 EGQVIGCHTVEAWNEQLQK N+TK L+VVDFTASW GPCRFIAPFLAELAKKLPNV FLKVDVDELK+VA +WAVE+MPTFMFLKEGKI+DKVVGAKK+ELQQTIAKH+ATAS Sbjct: 5 EGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMATAS 117
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.240e-50 Identity = 95/110 (86.36%), Postives = 103/110 (93.64%), Query Frame = -2 Query: 238 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 567 EGQVI CHTVE WNEQLQK+NE+K LVVVDFTASW GPCRFIAPF A+LAKKLPNVLFLKVD DELKSVA+DWA++AMPTFMFLKEGKI+DKVVGAKK+ELQ TIAKHLA Sbjct: 5 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 7.522e-48 Identity = 92/113 (81.42%), Postives = 102/113 (90.27%), Query Frame = -2 Query: 229 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 567 EGQVIG HTV+AWNE LQK + K+L+VVDFTASW GPC+FIA F AELAKK+P V FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKK+ELQQTIAKH+++ S Sbjct: 4 EGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISSTS 116
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.958e-44 Identity = 83/113 (73.45%), Postives = 99/113 (87.61%), Query Frame = -2 Query: 229 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 567 EGQV GCH VE WNE +K ETK+LVVVDFTASW GPCRFIAP LA++AKK+P+V+FLKVDVDELK+V+ +W+VEAMPTF+F+K+GK VD+VVGAKKEELQQTI KH A A+ Sbjct: 11 EGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPAT 123
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TRX5 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.331e-36 Identity = 66/108 (61.11%), Postives = 91/108 (84.26%), Query Frame = -2 Query: 244 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKH 567 EG+VI CHT+E WNE+++ +NE+K+L+V+DFTASW PCRFIAP AE+AKK NV+F K+DVDEL++VA ++ VEAMPTF+F+KEG I+D+VVGA K+E+ + + KH Sbjct: 4 EGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 9.537e-35 Identity = 66/113 (58.41%), Postives = 86/113 (76.11%), Query Frame = -2 Query: 229 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 567 EG V CH+ E W +LQ++ +TK+LV VDFTA+W GPCR I P EL+KK P + FLKVDVDEL+ VA +W VEAMPTF+F+K+GK VDKVVGAKK++L++ +A A A+ Sbjct: 3 EGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKVAALAAAAT 115
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.074e-34 Identity = 64/108 (59.26%), Postives = 87/108 (80.56%), Query Frame = -2 Query: 244 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKH 567 E QVI CHTV+ WNE+ QK+ ++ +L+V+DFTASW GPCR I P+++ELAKK P+V F KVDVD+LK VA ++ VEAMP+F+ LKEG+ V+++VGA+K+EL IA H Sbjct: 4 EAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVH 111
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.799e-33 Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = -2 Query: 226 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 567 EG VI CH + ++ Q+ K+ E ++V++DFTASW GPCRFIAP AE AKK P +FLKVDVDELK VA + VEAMPTF+F+K+G DKVVGA+K++LQ TI KH+ +A Sbjct: 5 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAA 118
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.799e-33 Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = -2 Query: 226 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 567 EG VI CH + ++ Q+ K+ E ++V++DFTASW GPCRFIAP AE AKK P +FLKVDVDELK VA + VEAMPTF+F+K+G DKVVGA+K++LQ TI KH+ +A Sbjct: 5 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAA 118
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.799e-33 Identity = 66/115 (57.39%), Postives = 89/115 (77.39%), Query Frame = -2 Query: 226 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKK-LPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 567 EGQVIGCH ++ W QL + ++ +L+V+DFTASW PCR IAP A+LAKK + + +F KVDVDEL++VA ++ VEAMPTF+ +K+G +VDKVVGA+KE+L TIAKH A+A Sbjct: 5 EGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKHTGVATA 119 The following BLAST results are available for this feature:
BLAST of CN189256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189256 ID=CN189256; Name=CN189256; organism=Citrus sinensis; type=EST; length=568bpback to top |