CN189250

Overview
NameCN189250
Unique NameCN189250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189250 vs. ExPASy Swiss-Prot
Match: LGUL_BRAJU (Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = -1
Query:  543 ERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKIGGS 674
            E+LGVEF KKP  GKMK +AFIKDPD YWIEIFDLKTIG   G+
Sbjct:  140 EQLGVEFVKKPHDGKMKNIAFIKDPDGYWIEIFDLKTIGTTAGN 183          
BLAST of CN189250 vs. ExPASy Swiss-Prot
Match: LGUL_ARATH (Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = -1
Query:  558 ERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIG 674
            E LGVEFAKKP+ GKMK +AFIKDPD YWIEIFDLKTIG
Sbjct:  140 EELGVEFAKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIG 178          
BLAST of CN189250 vs. ExPASy Swiss-Prot
Match: LGUL_CICAR (Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = -1
Query:  552 ERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKI 674
            + LGVEF KKPD GKMKG+AFIKDPD YWIE+FD KTIG +
Sbjct:  141 QNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGNV 181          
BLAST of CN189250 vs. ExPASy Swiss-Prot
Match: LGUL_SOYBN (Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.429e-12
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = -1
Query:  552 ERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKI 674
            + LGVEF KKP+ GKMKG+AFIKDPD YWIEIFD KTIG +
Sbjct:  140 QNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNV 180          
BLAST of CN189250 vs. ExPASy Swiss-Prot
Match: LGUL_SOLLC (Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 32/44 (72.73%), Postives = 33/44 (75.00%), Query Frame = -1
Query:  543 ERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKIGGS 674
            E LGVEF KKP  GKMKG+AFIKDPD YWIEIFD K I    GS
Sbjct:  140 ESLGVEFVKKPLDGKMKGIAFIKDPDGYWIEIFDTKIIKDAAGS 183          
The following BLAST results are available for this feature:
BLAST of CN189250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LGUL_BRAJU1.090e-1275.00Lactoylglutathione lyase OS=Brassica juncea GN=GLY... [more]
LGUL_ARATH1.090e-1284.62Lactoylglutathione lyase OS=Arabidopsis thaliana G... [more]
LGUL_CICAR1.424e-1275.61Lactoylglutathione lyase OS=Cicer arietinum PE=2 S... [more]
LGUL_SOYBN2.429e-1275.61Lactoylglutathione lyase OS=Glycine max GN=GLXI PE... [more]
LGUL_SOLLC5.982e-1172.73Lactoylglutathione lyase OS=Solanum lycopersicum G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001I22_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189250 ID=CN189250; Name=CN189250; organism=Citrus sinensis; type=EST; length=674bp
TTTTTTTTTTTTTTTTAAATAAAAATTTCTCCGATGCTAACATCCCTACT
TTACCAAAATGTGAGTTGGAGCAATGCAATCATTAATTTGCAGTGTACAA
TAACAGCACATCAGACAATAGAAAGTGAAGTGCGGACAATAGTAGAAGAG
AAGAATTAGATAGGCTGCTAACTTTTATTTGATCTGTGATTTCCTATCTC
CTCAAATCTTTTAAATCCACAGAGTTAAAAACTAGCCTTATACCCTATGG
CCATGATAACCTTTGGTTGGGTGAAGAAAAGAAATCAGCAAATGGAAGTT
CCCATACCATACTTCTCTTCAATATCCTCAACTAACAAGCAGAAGATCAC
ACATATTGAAAATAGATGCTTTGATCATAACCTCATTATTGTAGTACAAG
TCTTTCGGAGTTTGAAACATATTTGCGATCGTATTTCAGTCCATAATGCA
TCTCATGGAAGACGTTCTATTCAACAGAGAATTTATCAAACACTACAATG
AATGGATCCCGCCTTCCCTGAGTGAGCAATGTCATATCAAGTGCTACCGC
CAATTTTTCCAATTGTTTTGAGGTCAAAGATTTCAATCCAATAGTCATCA
GGGTCTTTAATGAATGCTACGCCTTTCATTTTTCCACCATCTGGTTTCTT
TGCAAATTCCACCCCTAGACGTTC
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