EY676438
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSEFS (Co-chaperone protein hscB homolog OS=Pseudomonas fluorescens (strain SBW25) GN=hscB PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.453e-47 Identity = 85/95 (89.47%), Postives = 91/95 (95.79%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +GTPCHFALFELQP+FRLDLEQLATRYRELARGVHPDRFADASEREQRLALE+SASLNEAYQTLKNPPKRARYLLAM G E+P+EVTV DPD L+ Sbjct: 1 MGTPCHFALFELQPNFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEKSASLNEAYQTLKNPPKRARYLLAMNGGEVPIEVTVHDPDFLM 95 HSP 2 Score: 35.4242 bits (80), Expect = 3.453e-47 Identity = 19/36 (52.78%), Postives = 24/36 (66.67%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADLGRNRGLSAAV*KWAQDE 408 +QQMQW EEL++LQDEAD+ + K AQDE Sbjct: 95 MQQMQWREELEDLQDEADVAGVAVFKRRL-KTAQDE 129
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSEPW (Co-chaperone protein hscB homolog OS=Pseudomonas putida (strain W619) GN=hscB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.377e-42 Identity = 74/95 (77.89%), Postives = 88/95 (92.63%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +GTPCHFALF+LQP FRLDL++LATRYRELAR VHPDRFADASEREQR+ALE+SA+LN+AYQTL++ P+RARYLLA+GG E+P EVTV DPD L+ Sbjct: 1 MGTPCHFALFDLQPCFRLDLDKLATRYRELAREVHPDRFADASEREQRVALEKSAALNDAYQTLRSAPRRARYLLAIGGHEVPQEVTVHDPDFLL 95 HSP 2 Score: 38.1206 bits (87), Expect = 1.377e-42 Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADL 357 LQQMQW EEL+ELQDEADL Sbjct: 95 LQQMQWREELEELQDEADL 113
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSESM (Co-chaperone protein hscB homolog OS=Pseudomonas syringae pv. tomato GN=hscB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.339e-42 Identity = 78/95 (82.11%), Postives = 88/95 (92.63%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +G+PCHFALFEL+P F+LDL+QLATRYRELAR VHPDRFADA EREQRLALE+SASLNEAYQTLK+PPKRARYLLAM G E+PLEVTV DP+ L+ Sbjct: 1 MGSPCHFALFELKPEFQLDLDQLATRYRELARNVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPKRARYLLAMNGNEVPLEVTVHDPEFLL 95 HSP 2 Score: 31.187 bits (69), Expect = 2.339e-42 Identity = 19/36 (52.78%), Postives = 23/36 (63.89%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADLGRNRGLSAAV*KWAQDE 408 LQQMQ E+L++LQDEADL + K AQDE Sbjct: 95 LQQMQLREDLEDLQDEADLAGVATFKRQL-KVAQDE 129
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSEPG (Co-chaperone protein hscB homolog OS=Pseudomonas putida (strain GB-1) GN=hscB PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.339e-42 Identity = 73/95 (76.84%), Postives = 88/95 (92.63%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +GTPCH+ALF+LQPSFRLDL++LATRYRELAR VHPDRFADASEREQR+ALE+SA+LN+AYQTL++ P+RARYLLA+ G E+P EVTV DPD L+ Sbjct: 1 MGTPCHYALFDLQPSFRLDLDKLATRYRELAREVHPDRFADASEREQRIALEKSAALNDAYQTLRSAPRRARYLLAISGHEVPQEVTVHDPDFLL 95 HSP 2 Score: 38.5058 bits (88), Expect = 2.339e-42 Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADLGRNRGLSAAV*KWAQD 405 LQQMQW EEL+ELQDEADL G+ K+AQD Sbjct: 95 LQQMQWREELEELQDEADLD-GVGVFKKRLKFAQD 128
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSEPK (Co-chaperone protein hscB homolog OS=Pseudomonas putida (strain KT2440) GN=hscB PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 3.047e-42 Identity = 73/95 (76.84%), Postives = 88/95 (92.63%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +GTPCH+ALF+LQPSFRLDL++LATRYRELAR VHPDRFADASEREQR+ALE+SA+LN+AYQTL++ P+RARYLLA+ G E+P EVTV DPD L+ Sbjct: 1 MGTPCHYALFDLQPSFRLDLDKLATRYRELAREVHPDRFADASEREQRIALEKSAALNDAYQTLRSAPRRARYLLAISGHEVPQEVTVHDPDFLL 95 HSP 2 Score: 38.1206 bits (87), Expect = 3.047e-42 Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADL 357 LQQMQW EEL+ELQDEADL Sbjct: 95 LQQMQWREELEELQDEADL 113
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSEPF (Co-chaperone protein hscB homolog OS=Pseudomonas fluorescens (strain Pf0-1) GN=hscB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.971e-42 Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +G PCHFALFELQP FRLDLEQLATRYRELARGVHPDRFADASEREQR ALEQSA LN+AYQTLK+P +RARYLL + G E+P+EVTV DP+ L+ Sbjct: 1 MGIPCHFALFELQPGFRLDLEQLATRYRELARGVHPDRFADASEREQRSALEQSARLNDAYQTLKSPAQRARYLLTISGHEVPMEVTVHDPEFLL 95 HSP 2 Score: 35.039 bits (79), Expect = 3.971e-42 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADL 357 LQQMQW EEL++LQD ADL Sbjct: 95 LQQMQWREELEDLQDSADL 113
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSEP1 (Co-chaperone protein hscB homolog OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hscB PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.971e-42 Identity = 73/95 (76.84%), Postives = 88/95 (92.63%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +GTPCH+ALF+LQPSFRLDL++LATRYRELAR VHPDRFADASEREQR+ALE+SA+LN+AYQTL++ P+RARYLLA+ G E+P EVTV DPD L+ Sbjct: 1 MGTPCHYALFDLQPSFRLDLDKLATRYRELAREVHPDRFADASEREQRVALEKSAALNDAYQTLRSAPRRARYLLAISGHEVPQEVTVHDPDFLL 95 HSP 2 Score: 38.1206 bits (87), Expect = 3.971e-42 Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADL 357 LQQMQW EEL+ELQDEADL Sbjct: 95 LQQMQWREELEELQDEADL 113
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSEE4 (Co-chaperone protein hscB homolog OS=Pseudomonas entomophila (strain L48) GN=hscB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 6.743e-42 Identity = 72/95 (75.79%), Postives = 88/95 (92.63%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +GTPCH+ALF+LQP+FRLDL++LA RYRELAR VHPDRFADASEREQR+ALE+SA+LN+AYQTL++ P+RARYLLA+GG E+P EVTV DPD L+ Sbjct: 1 MGTPCHYALFDLQPAFRLDLDKLAVRYRELAREVHPDRFADASEREQRVALEKSAALNDAYQTLRSAPRRARYLLAIGGHEVPQEVTVHDPDFLL 95 HSP 2 Score: 38.1206 bits (87), Expect = 6.743e-42 Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADL 357 LQQMQW EEL+ELQDEADL Sbjct: 95 LQQMQWREELEELQDEADL 113
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSEMY (Co-chaperone protein hscB homolog OS=Pseudomonas mendocina (strain ymp) GN=hscB PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.301e-41 Identity = 78/95 (82.11%), Postives = 84/95 (88.42%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +G PCHFALF+LQPSFRLDLEQLA RYRELAR VHPDRFADA EREQRLALE+SA LNEAYQ LK P +RARYLLA+ G ELPLEVTVQDPD L+ Sbjct: 1 MGNPCHFALFDLQPSFRLDLEQLAARYRELARQVHPDRFADAGEREQRLALERSACLNEAYQVLKTPSQRARYLLALRGPELPLEVTVQDPDFLL 95 HSP 2 Score: 31.9574 bits (71), Expect = 4.301e-41 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADL 357 LQQMQ EEL+ELQD+ADL Sbjct: 95 LQQMQLREELEELQDDADL 113
BLAST of EY676438 vs. ExPASy Swiss-Prot
Match: HSCB_PSEU5 (Co-chaperone protein hscB homolog OS=Pseudomonas stutzeri (strain A1501) GN=hscB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 9.996e-37 Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 3 Query: 18 VGTPCHFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEVTVQDPDSLI 302 +GTPCHFALF+L+P F LDL QLA RYRELAR VHPDRFADA E EQR ALE+SA+LNEAYQTLK+P +RARYLLA+ G ++PLE TVQDP L+ Sbjct: 1 MGTPCHFALFDLKPDFELDLAQLADRYRELARQVHPDRFADAGESEQRQALERSANLNEAYQTLKSPSRRARYLLALEGHDVPLEATVQDPAFLM 95 HSP 2 Score: 30.8018 bits (68), Expect = 9.996e-37 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 301 LQQMQWPEELKELQDEADL 357 +QQM W EEL+EL ++ADL Sbjct: 95 MQQMHWREELEELHEQADL 113 The following BLAST results are available for this feature:
BLAST of EY676438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >EY676438 ID=EY676438; Name=EY676438; organism=Citrus sinensis; type=EST; length=756bpback to top |