EY758012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 4.209e-93 Identity = 129/140 (92.14%), Postives = 132/140 (94.29%), Query Frame = 2 Query: 32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANG 451 SL GDNGFDPLGLAEDPENLKW+VQAELVN RWAMLGV GMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKELANG Sbjct: 70 SLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANG 209 HSP 2 Score: 88.9669 bits (219), Expect = 4.209e-93 Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 3 Query: 540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 668 GRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQT + Sbjct: 209 GRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.074e-92 Identity = 126/140 (90.00%), Postives = 130/140 (92.86%), Query Frame = 2 Query: 32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANG 451 SLPGDNGFDPLGLAEDPENL+W+VQAELVN RWAMLGV GMLLPEVFT IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKE+ANG Sbjct: 69 SLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANG 208 HSP 2 Score: 94.3597 bits (233), Expect = 2.074e-92 Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = 3 Query: 540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 674 GRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDPWHNTIVQTL GN Sbjct: 208 GRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.496e-72 Identity = 102/141 (72.34%), Postives = 115/141 (81.56%), Query Frame = 2 Query: 32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDA-GKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANG 451 SL GDNGFDPL LAEDPE+L+W+VQA++VN RWAMLGV GML+PEV TK G++NAP+W GK YFASSST + + YVEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP E KEKELANG Sbjct: 49 SLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAPL-ENKEKELANG 187 HSP 2 Score: 86.2705 bits (212), Expect = 2.496e-72 Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 3 Query: 540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 671 GRLAMLAFLGF+VQHNV GKGPFENL QH++DPWHNTI+QT+SG Sbjct: 187 GRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 8.812e-51 Identity = 82/138 (59.42%), Postives = 97/138 (70.29%), Query Frame = 2 Query: 32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNFAPTDEAKEKEL 442 SLPGD GFDPLGL DPE+LKW QAELV+SRWAMLG G+ +PE TKIG++N P WY AG+ EYF ++TLFVIE +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + AK KEL Sbjct: 81 SLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKEL 218 HSP 2 Score: 48.9062 bits (115), Expect = 8.812e-51 Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 3 Query: 540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 668 GRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 226 GRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 3.316e-50 Identity = 80/138 (57.97%), Postives = 98/138 (71.01%), Query Frame = 2 Query: 32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNFAPTDEAKEKEL 442 SLPGD GFDPLGLA DPE+L+W QAELV+ RWAMLG G+ +PE+ TKIGI+N P WY AG+ EYF ++TLF++E +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + AK KEL Sbjct: 81 SLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKEL 218 HSP 2 Score: 48.9062 bits (115), Expect = 3.316e-50 Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 3 Query: 540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 668 GRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 226 GRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.252e-25 Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQW--YDAGKAEY------FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF----APTDEAKEKELANG 451 S PGD GFDPLGLA PEN + + ++E+ + RWAML V G+L+PE + A +W G+A Y + + T+ IEF+ + E +R ++ +DP K+ YPGG F+PL F A +E K KE+ NG Sbjct: 61 SSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR--------TMEKDPEKKK---------YPGGAFDPLGFSKDPAKFEELKLKEIKNG 195 HSP 2 Score: 55.0694 bits (131), Expect = 1.252e-25 Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 3 Query: 540 GRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 653 GRLAMLAF+GF VQ + G GP ENL H++DPWHN I Sbjct: 195 GRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.088e-25 Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQW--YDAGKAEY------FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF----APTDEAKEKELANG 451 S PGD GFD LGL E P NL+ Y ++EL++ RWAML V G+++PE + A +W G+A Y + + T+ IEF+ +VE +R S+ +D K+ YPGG F+PL + A +E K KE+ NG Sbjct: 62 SAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR--------SMEKDSEKKK---------YPGGAFDPLGYSKDPAKFEELKVKEIKNG 196 HSP 2 Score: 51.6026 bits (122), Expect = 6.088e-25 Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 3 Query: 540 GRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 653 GRLA+LA +GF VQ + G GP ENL H++DPWHN I Sbjct: 196 GRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.253e-21 Identity = 73/178 (41.01%), Postives = 91/178 (51.12%), Query Frame = 2 Query: 32 SLPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGII---NAPQWYD------AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PPNEVGYPGG-IFNPLNFAPTD----EAKEKELANGNNS--AKLAYF 478 SLPGD GFDPLGL+ DPE +W E++N R+AMLG VG + PE K+G+I A W+ AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L YPGG FNPL F + E K KE+ NG + A L YF Sbjct: 71 SLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYF 242
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.473e-21 Identity = 72/177 (40.68%), Postives = 91/177 (51.41%), Query Frame = 2 Query: 35 LPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGII---NAPQWYD------AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PPNEVGYPGG-IFNPLNFAPTD----EAKEKELANGNNS--AKLAYF 478 LPGD GFDPLGL+ DPE KW E++N R+AMLG G + PE+ K G+I A W+ AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L + YPGG +FNPL F + E K KE+ NG + A L YF Sbjct: 70 LPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.461e-20 Identity = 50/151 (33.11%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 38 PGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-W-QDIKNPGSVNQDPIFKQYSLPPNEVG------YPGGIFNPLNFAPTDEA----KEKELANG 451 PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ ++ G+ W+ AG ++ F+ ++ L H I W + G+V + Y + +G YPGG F+PL A EA K KEL NG Sbjct: 77 PGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV------EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNG 220 HSP 2 Score: 50.447 bits (119), Expect = 8.461e-20 Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = 3 Query: 540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 647 GRLAM + GF VQ VTGKGP ENL H+SDP +N Sbjct: 220 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNN 255 The following BLAST results are available for this feature:
BLAST of EY758012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY758012 ID=EY758012; Name=EY758012; organism=Citrus sinensis; type=EST; length=852bpback to top |