EY758012

Overview
NameEY758012
Unique NameEY758012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 4.209e-93
Identity = 129/140 (92.14%), Postives = 132/140 (94.29%), Query Frame = 2
Query:   32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANG 451
            SL GDNGFDPLGLAEDPENLKW+VQAELVN RWAMLGV GMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPT EAKEKELANG
Sbjct:   70 SLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANG 209          

HSP 2 Score: 88.9669 bits (219), Expect = 4.209e-93
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 3
Query:  540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 668
            GRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQT +
Sbjct:  209 GRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251          
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.074e-92
Identity = 126/140 (90.00%), Postives = 130/140 (92.86%), Query Frame = 2
Query:   32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANG 451
            SLPGDNGFDPLGLAEDPENL+W+VQAELVN RWAMLGV GMLLPEVFT IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPT EAKEKE+ANG
Sbjct:   69 SLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANG 208          

HSP 2 Score: 94.3597 bits (233), Expect = 2.074e-92
Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = 3
Query:  540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 674
            GRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDPWHNTIVQTL GN
Sbjct:  208 GRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252          
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 2.496e-72
Identity = 102/141 (72.34%), Postives = 115/141 (81.56%), Query Frame = 2
Query:   32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDA-GKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANG 451
            SL GDNGFDPL LAEDPE+L+W+VQA++VN RWAMLGV GML+PEV TK G++NAP+W    GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP  E KEKELANG
Sbjct:   49 SLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAPL-ENKEKELANG 187          

HSP 2 Score: 86.2705 bits (212), Expect = 2.496e-72
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 3
Query:  540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 671
            GRLAMLAFLGF+VQHNV GKGPFENL QH++DPWHNTI+QT+SG
Sbjct:  187 GRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230          
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 8.812e-51
Identity = 82/138 (59.42%), Postives = 97/138 (70.29%), Query Frame = 2
Query:   32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNFAPTDEAKEKEL 442
            SLPGD GFDPLGL  DPE+LKW  QAELV+SRWAMLG  G+ +PE  TKIG++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +     AK KEL
Sbjct:   81 SLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKEL 218          

HSP 2 Score: 48.9062 bits (115), Expect = 8.812e-51
Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 3
Query:  540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 668
            GRLAMLA +G   QH  TG GP +NL  H++DP H TI    S
Sbjct:  226 GRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268          
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 3.316e-50
Identity = 80/138 (57.97%), Postives = 98/138 (71.01%), Query Frame = 2
Query:   32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNFAPTDEAKEKEL 442
            SLPGD GFDPLGLA DPE+L+W  QAELV+ RWAMLG  G+ +PE+ TKIGI+N P WY AG+ EYF  ++TLF++E +L  + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +     AK KEL
Sbjct:   81 SLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKEL 218          

HSP 2 Score: 48.9062 bits (115), Expect = 3.316e-50
Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 3
Query:  540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 668
            GRLAMLA +G   QH  TG GP +NL  H++DP H TI    S
Sbjct:  226 GRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268          
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.252e-25
Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQW--YDAGKAEY------FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF----APTDEAKEKELANG 451
            S PGD GFDPLGLA  PEN + + ++E+ + RWAML V G+L+PE       + A +W     G+A Y      + +  T+  IEF+   + E +R        ++ +DP  K+         YPGG F+PL F    A  +E K KE+ NG
Sbjct:   61 SSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR--------TMEKDPEKKK---------YPGGAFDPLGFSKDPAKFEELKLKEIKNG 195          

HSP 2 Score: 55.0694 bits (131), Expect = 1.252e-25
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 3
Query:  540 GRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 653
            GRLAMLAF+GF VQ +   G GP ENL  H++DPWHN I
Sbjct:  195 GRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233          
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.088e-25
Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   32 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQW--YDAGKAEY------FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF----APTDEAKEKELANG 451
            S PGD GFD LGL E P NL+ Y ++EL++ RWAML V G+++PE       + A +W     G+A Y      + +  T+  IEF+   +VE +R        S+ +D   K+         YPGG F+PL +    A  +E K KE+ NG
Sbjct:   62 SAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR--------SMEKDSEKKK---------YPGGAFDPLGYSKDPAKFEELKVKEIKNG 196          

HSP 2 Score: 51.6026 bits (122), Expect = 6.088e-25
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 3
Query:  540 GRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 653
            GRLA+LA +GF VQ +   G GP ENL  H++DPWHN I
Sbjct:  196 GRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234          
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.253e-21
Identity = 73/178 (41.01%), Postives = 91/178 (51.12%), Query Frame = 2
Query:   32 SLPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGII---NAPQWYD------AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PPNEVGYPGG-IFNPLNFAPTD----EAKEKELANGNNS--AKLAYF 478
            SLPGD GFDPLGL+ DPE        +W    E++N R+AMLG VG + PE   K+G+I    A  W+       AG   Y+A + TLFV+E  L  + E RR+QD   PGS+      KQY L             YPGG  FNPL F   +    E K KE+ NG  +  A L YF
Sbjct:   71 SLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYF 242          
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.473e-21
Identity = 72/177 (40.68%), Postives = 91/177 (51.41%), Query Frame = 2
Query:   35 LPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGII---NAPQWYD------AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PPNEVGYPGG-IFNPLNFAPTD----EAKEKELANGNNS--AKLAYF 478
            LPGD GFDPLGL+ DPE        KW    E++N R+AMLG  G + PE+  K G+I    A  W+       AG   Y+A + TLFV+E  L  + E RR+QD   PGS+      KQY L          +  YPGG +FNPL F   +    E K KE+ NG  +  A L YF
Sbjct:   70 LPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240          
BLAST of EY758012 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.461e-20
Identity = 50/151 (33.11%), Postives = 74/151 (49.01%), Query Frame = 2
Query:   38 PGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-W-QDIKNPGSVNQDPIFKQYSLPPNEVG------YPGGIFNPLNFAPTDEA----KEKELANG 451
            PGD G+D  GL+ DPE      + E+++SRWAMLG +G + PE+ ++ G+      W+ AG ++ F+     ++    L H   I   W   +   G+V      + Y +    +G      YPGG F+PL  A   EA    K KEL NG
Sbjct:   77 PGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV------EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNG 220          

HSP 2 Score: 50.447 bits (119), Expect = 8.461e-20
Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = 3
Query:  540 GRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 647
            GRLAM +  GF VQ  VTGKGP ENL  H+SDP +N
Sbjct:  220 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNN 255          
The following BLAST results are available for this feature:
BLAST of EY758012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CB24_ARATH4.209e-9392.14Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB24_PEA2.074e-9290.00Chlorophyll a-b binding protein P4, chloroplastic ... [more]
CB120_HORVU2.496e-7272.34Chlorophyll a-b binding protein 1B-20, chloroplast... [more]
CB12_PETHY8.812e-5159.42Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB12_SOLLC3.316e-5057.97Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB121_HORVU1.252e-2536.18Chlorophyll a-b binding protein 1B-21, chloroplast... [more]
CB11_SOLLC6.088e-2536.18Chlorophyll a-b binding protein 6A, chloroplastic ... [more]
CB23_PEA7.253e-2141.01Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB13_SOLLC9.473e-2140.68Chlorophyll a-b binding protein 8, chloroplastic O... [more]
CB28_PEA8.461e-2033.11Chlorophyll a-b binding protein 8, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-030-B08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758012 ID=EY758012; Name=EY758012; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGCAAAATCTCTTCATGGATTTAGCCTCCCCGGTGACAATG
GATTTGACCCCTTGGGGCTTGCCGAGGATCCTGAGAACTTGAAGTGGTAT
GTGCAAGCCGAGCTTGTGAATTCGCGCTGGGCCATGTTGGGGGTTGTTGG
AATGTTGTTGCCCGAAGTTTTCACAAAGATTGGAATTATTAATGCTCCTC
AATGGTATGATGCTGGGAAGGCTGAGTACTTTGCATCATCATCGACCCTT
TTCGTGATCGAGTTCATCTTGTTCCACTATGTGGAGATAAGAAGATGGCA
AGACATAAAGAACCCAGGAAGTGTCAACCAAGACCCCATTTTCAAGCAGT
ACAGCTTGCCTCCAAACGAAGTTGGGTACCCCGGTGGCATCTTCAACCCA
CTCAACTTTGCACCCACTGACGAGGCAAAGGAGAAGGAGCTTGCCAATGG
TAATAACTCGGCCAAATTGGCTTATTTCTATTGATAAATATTTGCTTTAT
TTTGATTCGGACTAATGTTTTGAGAATTTTGAATGCGCAGGGAGATTGGC
AATGTTGGCATTCTTGGGATTTATTGTTCAGCACAATGTGACAGGCAAAG
GGCCATTTGAAAACCTCCTGCAACACATCTCTGACCCATGGCACAACACC
ATCGTCCAGACACTAAGTGGTAATTAATCAAAGATGGATTGGCCATCCCG
GATCCTGTTTCTTTCTTTTGTACCATGAATCTGTAGTTTTTGAGTGAGAT
TTTGAGCATCATGTAAACATGGAAACTCTCAATGTACAGGGGAACTATGA
NTGTATTTATATATCATTTTACACCAAAAAAAAAAAAAAAAAAAAAAAAA
AA
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