EY757962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: AB2D_ARATH (ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.264e-53 Identity = 109/183 (59.56%), Postives = 136/183 (74.32%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSA-GLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFID-QESLY 560 PQRPY VLGSLRQQL+YPTW+ V+ + + G P L E KP+TDDL++ LE V LG+I R LD+ +EWSSVLSLGEQQRLAFARLLLS+P++ LLDESTSALDEANEA LY+QI++AGITYIS+GHRRTL FH ++L+IST D S++ NW++E +D Q+SLY Sbjct: 519 PQRPYMVLGSLRQQLLYPTWSATVEETTPGGSNIDGSPPLLIREDGNE-------KPTTDDLMRTLEKVCLGHIADRFGGLDSIHEWSSVLSLGEQQRLAFARLLLSQPKLALLDESTSALDEANEAFLYQQIQSAGITYISIGHRRTLTKFHNKILQISTADPKSNERNWRIEDVDAQDSLY 694
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: Y182_SYNY3 (Uncharacterized ABC transporter ATP-binding protein sll0182 OS=Synechocystis sp. (strain PCC 6803) GN=sll0182 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.898e-26 Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFID 545 PQRPY +LG+LR+QLIYP SAQ + + D L++ L V L + R LD+ WSSVLSLGEQQR+A AR+ +++P+ +LDE+TSALD NEA LY + G T+ISVGHR TL +FH++ L + ++ W++ I+ Sbjct: 523 PQRPYMILGTLREQLIYP-----------------------SAQSIAD---------DDFLLETLNKVNLPDLAERFGGLDSLENWSSVLSLGEQQRIALARVFINQPRYAILDEATSALDVNNEAELYHALTDLGTTFISVGHRPTLRNFHRQCLEV------QAEGRWQISPIN 660
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: AB1D_ARATH (ABC transporter D family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21 Identity = 68/181 (37.57%), Postives = 91/181 (50.28%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPST--DDLIKA-LEDVKLGYILPR-LNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFIDQ 548 PQRPYT LG+LR Q+IYP EE + A KL G S++ + D +K LE+V+L Y+L R + D T W +LSLGEQQRL ARL +P+ +LDE T+A E LY G+T+I+ R L FH LR+ + NW+L I+Q Sbjct: 1174 PQRPYTCLGTLRDQIIYPLSKEEAEKR---------------AAKLYTSGESSTEAGSILDSHLKTILENVRLVYLLERDVGGWDATTNWEDILSLGEQQRLGMARLFFHRPKFGVLDECTNATSVDVEEQLYRVARDMGVTFITSSQRPALIPFHSLELRLI-----DGEGNWELRSIEQ 1334 HSP 2 Score: 85.1149 bits (209), Expect = 5.444e-16 Identity = 58/179 (32.40%), Postives = 83/179 (46.37%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFIDQES 554 PQRPY +G+LR QLIYP LTS Q+ E + + +++ L++V L Y+L R + W LSLGEQQRL ARL KP+ +LDE TSA+ E ++ A G + I++ HR L FH VL + + W + + +S Sbjct: 522 PQRPYMAVGTLRDQLIYP---------------------LTSGQESELL-------TEIGMVELLKNVDLEYLLDRYQP-EKEVNWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFAAKVRAMGTSCITISHRPALVAFHDVVLSL------DGEGGWSVHYKRDDS 665
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD3_RAT (ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus GN=Abcd3 PE=1 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 6.214e-20 Identity = 58/159 (36.48%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKA-LEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRI 491 PQRPY LG+LR Q+IYP E+ K K +D ++K L++V+LG+IL R D+ +W VLS GE+QR+A ARL KPQ +LDE TSA+ E ++Y GIT +V HR++L+ H+ L + Sbjct: 509 PQRPYMTLGTLRDQVIYPDGKEDQK----------------------------KKGISDQVLKGYLDNVQLGHILEREGGWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHM 639
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD3_HUMAN (ATP-binding cassette sub-family D member 3 OS=Homo sapiens GN=ABCD3 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.808e-19 Identity = 57/160 (35.62%), Postives = 81/160 (50.62%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLI--KALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRI 491 PQRPY LG+LR Q+IYP E+ K + DL+ + L++V+LG+IL R D+ +W VLS GE+QR+A ARL KPQ +LDE TSA+ E ++Y GIT +V HR++L+ H+ L + Sbjct: 509 PQRPYMTLGTLRDQVIYPDGREDQK-----------------------------RKGISDLVLKEYLDNVQLGHILEREGGWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHM 639
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD4_MOUSE (ATP-binding cassette sub-family D member 4 OS=Mus musculus GN=Abcd4 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.531e-18 Identity = 61/160 (38.12%), Postives = 85/160 (53.12%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWS--SVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRI 491 PQ+P+ G+LR+Q+IYP +E+ P S +A +V FL A L ++ R LD +W+ VLS GE QRL+FARL +P+ +LDE+TSAL E E+ LY + G+T+ISVGHR +L FH VLR+ Sbjct: 460 PQKPFFTDGTLREQVIYPL--KEIYPDSGSADDERIVRFLELAG-------------------------LSSLVARTGGLDQQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEAESELYRIGQQLGMTFISVGHRPSLEKFHSWVLRL 592
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD3_MOUSE (ATP-binding cassette sub-family D member 3 OS=Mus musculus GN=Abcd3 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.531e-18 Identity = 56/159 (35.22%), Postives = 80/159 (50.31%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKA-LEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRI 491 PQRPY LG+LR Q+IYP E+ K + +D ++K L++V+LG+IL R D+ +W VLS GE+QR+A ARL KPQ +LDE TSA+ E ++Y GIT +V H + L+ H+ L + Sbjct: 509 PQRPYMTLGTLRDQVIYPDGKEDQK----------------------------KRGISDQVLKEYLDNVQLGHILEREGGWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHTKCLWKHHEYYLHM 639
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD2_HUMAN (ATP-binding cassette sub-family D member 2 OS=Homo sapiens GN=ABCD2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.999e-18 Identity = 61/185 (32.97%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTD-DLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFIDQESLYNLS 569 PQRPY LGSLR Q+IYP ++V K TD DL + L +V L +I+ R D +W VLS GE+QR+ AR+ KP+ LLDE TSA+ E +++ + AGI+ +S+ HR +L+ +H +L Q + W+ E +D LS Sbjct: 547 PQRPYMSLGSLRDQVIYP----------------------------DSVDDMHDKGYTDQDLERILHNVHLYHIVQREGGWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKGAGISLLSITHRPSLWKYHTHLL------QFDGEGGWRFEQLDTAIRLTLS 697
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD4_HUMAN (ATP-binding cassette sub-family D member 4 OS=Homo sapiens GN=ABCD4 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.611e-18 Identity = 60/160 (37.50%), Postives = 86/160 (53.75%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWS--SVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRI 491 PQ+P+ G+LR+Q+IYP +EV P S +A ++ FL A L ++ R LD +W+ VLS GE QRL+FARL +P+ +LDE+TSAL E E+ LY + G+T+ISVGHR++L FH VL++ Sbjct: 460 PQKPFFTDGTLREQVIYPL--KEVYPDSGSADDERILRFLELAG-------------------------LSNLVARTEGLDQQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVESELYRIGQQLGMTFISVGHRQSLEKFHSLVLKL 592
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD2_MOUSE (ATP-binding cassette sub-family D member 2 OS=Mus musculus GN=Abcd2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.816e-18 Identity = 60/185 (32.43%), Postives = 87/185 (47.03%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTD-DLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFIDQESLYNLS 569 PQRPY LGSLR Q+IYP ++++ K TD DL + L V L +I+ R D +W VLS GE+QR+ AR+ KP+ LLDE TSA+ E +++ AGI+ +S+ HR +L+ +H +L Q + W+ E +D LS Sbjct: 548 PQRPYMSLGSLRDQVIYPDSADDMR----------------------------EKGYTDQDLERILHSVHLYHIVQREGGWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAIGAGISLLSITHRPSLWKYHTHLL------QFDGEGGWRFEQLDTAIRLTLS 698 The following BLAST results are available for this feature:
BLAST of EY757962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY757962 ID=EY757962; Name=EY757962; organism=Citrus sinensis; type=EST; length=859bpback to top |