EY757952

Overview
NameEY757952
Unique NameEY757952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length600
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13458 contig Csv1_Contig13458:1..600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY757952 vs. ExPASy Swiss-Prot
Match: MTPC3_ARATH (Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.797e-40
Identity = 81/121 (66.94%), Postives = 96/121 (79.34%), Query Frame = 1 
Query:   28 WMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHH-KSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHA 387
            W+DP GAI+LA+YTI  WS TV+EN  SL+G+SA PE LQKLTYL       +I+H+DTVRAYTFG  YFVEVDI LP  +PL+EAH IGESLQ KLE LPE+ERAFVHLD+E  H+PEH+
Sbjct:  282 WLDPTGAILLAIYTIVNWSGTVMENAVSLIGQSAPPEVLQKLTYLVMRQGGDNIKHVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHAIGESLQIKLEELPEVERAFVHLDFECHHKPEHS 402
The following BLAST results are available for this feature:
BLAST of EY757952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MTPC3_ARATH3.797e-4066.94Putative metal tolerance protein C3 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-E04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757952 ID=EY757952; Name=EY757952; organism=Citrus sinensis; type=EST; length=600bp
CCACGCGTCCGTAATTACATTGATGACTGGATGGATCCCGTTGGAGCTAT
TATTCTGGCCTTGTACACCATCCGCACATGGTCAATGACAGTGTTGGAAA
ATGTGAACTCCCTTGTTGGAAGATCAGCTGCTCCAGAGTATCTACAAAAG
CTCACATACCTCTGCTGGAACCACCACAAGTCCATAAGACATATTGACAC
AGTCCGAGCTTACACATTTGGGTCTCACTACTTTGTGGAGGTTGACATTG
TGCTGCCAGCAAGCATGCCCTTGCAAGAGGCCCATGACATCGGTGAGTCC
TTGCAGGAGAAGCTCGAGCTTCTGCCAGAGATTGAGCGCGCCTTTGTTCA
TCTTGATTACGAGTACACTCACAGACCTGAGCATGCTCAAGCACACTACT
AGGAACTGTAGAATATTCTGATGTTGTATTTATTATCATCTTGTTGGTGC
TTTTTGTTCCCACCCTACAAGTCCAATTATTAATTATCCACGAAAATCAA
GCCTTGTGAAAGATAGATTGTCATTGACAAGATTATTTACACATATTTTA
GTAATTTAAGTTCTATTACACGATCAAAAAAAAAAAAAAAAAAAAAAAAA
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