EY757944

Overview
NameEY757944
Unique NameEY757944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7687 contig Csv1_Contig7687:287..1174. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY757944 vs. ExPASy Swiss-Prot
Match: ASPL1_ARATH (Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.919e-34
Identity = 86/235 (36.60%), Postives = 127/235 (54.04%), Query Frame = 2 
Query:   17 SKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSL--RQTHPTYNITITQVSVGGNAV-NFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTS----DLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKS--DNVNIIGQNFMTGYNIVFDREKM 694
            S SV +R+  GCG+ Q+G +LDG AP+GL GLG  + SVPS L+  GL+ NSFS+CF  + +GRI FGD G   Q  TPF       +  Y + +    +G + +    F+   DSG SFTYL +  Y ++     +L  ++   +TS     + +EYCY  S      + P + L       F ++ P+  V  + +GL  +CL +  S  + +  IGQN+M GY +VFDRE M
Sbjct:  219 SSSVKARVVIGCGKKQSGDYLDGVAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQLDNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKV-----ALEIDRHINATSKNFEGVSWEYCYESSAEP---KVPAIKLKFSHNNTFVIHKPL-FVFQQSQGLVQFCLPISPSGQEGIGSIGQNYMRGYRMVFDRENM 444
The following BLAST results are available for this feature:
BLAST of EY757944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASPL1_ARATH7.919e-3436.60Aspartic proteinase-like protein 1 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-D06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757944 ID=EY757944; Name=EY757944; organism=Citrus sinensis; type=EST; length=882bp
CCACGCGTCCGAGCAAAGTAAATCGGTTGATTCTCGGATTTCTTTCGGCT
GTGGTCGGGTTCAGACTGGTTCATTCTTGGATGGTGCAGCTCCTAATGGT
CTATTTGGGCTTGGGATGGACAAGACTTCAGTTCCCAGCATATTAGCAAA
TCAAGGGCTAATTCCAAATTCCTTTTCCATGTGTTTCGGATCTGATGGCA
CTGGGAGAATCAGCTTTGGAGATAAAGGAAGCCCAGGCCAAGGAGAAACA
CCGTTTTCCCTCAGGCAAACACATCCAACTTACAATATCACCATCACTCA
AGTTAGTGTTGGGGGTAATGCCGTTAATTTTGAGTTTAGTGCAATTTTTG
ACTCCGGTACCTCATTTACATACTTGAACGACCCTGCATATACTCAAATT
TCTGAGACTTTCAACTCACTGGCCAAGGAAAAAAGAGAAACATCTACTTC
CGATCTCCCTTTTGAATATTGTTATGTATTGAGTCCAAATCAAACCAACT
TCGAGTATCCTGTTGTGAATCTCACAATGAAAGGCGGTGGCCCATTTTTT
GTCAATGATCCAATTGTAATAGTTTCTTCGGAACCTAAGGGTTTATATTT
ATATTGTCTGGGTGTCGTCAAAAGCGATAATGTGAATATCATTGGACAAA
ACTTCATGACTGGTTACAATATAGTCTTTGATCGGGAGAAAATGTATTGG
GTTGGAAGGCATCTGACTGTTATGGTGGTACAACTCCAGTGCTCTTCCAA
TACACCAAAATCTTCAGTTCCCCAGCAACTGCTCTCAACCCAGAAGCACG
GCTGGGTGTATCTCTCCCGCGTCTGCACACCTATTGGGAGTCATTCGCTT
AGCTGCACCTCTAACTGTGCACTTCTGTGATG
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