EY757937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY757937 vs. ExPASy Swiss-Prot
Match: PRP8_MOUSE (Pre-mRNA-processing-splicing factor 8 OS=Mus musculus GN=Prpf8 PE=1 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 4.994e-63 Identity = 105/153 (68.63%), Postives = 128/153 (83.66%), Query Frame = 2 Query: 23 NELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEGEMAEGDREDTFS 481 NE PQLSPQD+T+HA+I+ +N WDGEK II+TCSFTPGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQMLLSDRFLGF+MVP WNYNFMGV+H +MKY ++L P+E+YHE HRP+HFL F+ L+EGE+ DRED ++ Sbjct: 2183 NESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA 2335
BLAST of EY757937 vs. ExPASy Swiss-Prot
Match: PRP8_HUMAN (Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens GN=PRPF8 PE=1 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 4.994e-63 Identity = 105/153 (68.63%), Postives = 128/153 (83.66%), Query Frame = 2 Query: 23 NELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEGEMAEGDREDTFS 481 NE PQLSPQD+T+HA+I+ +N WDGEK II+TCSFTPGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQMLLSDRFLGF+MVP WNYNFMGV+H +MKY ++L P+E+YHE HRP+HFL F+ L+EGE+ DRED ++ Sbjct: 2183 NESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA 2335
BLAST of EY757937 vs. ExPASy Swiss-Prot
Match: PRP8_CAEEL (Pre-mRNA-splicing factor 8 homolog OS=Caenorhabditis elegans GN=prp-8 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.836e-58 Identity = 100/154 (64.94%), Postives = 121/154 (78.57%), Query Frame = 2 Query: 23 NELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEG-EMAEGDREDTFS 481 NELPQLSPQD+T+HA++L +N WDGEK +++TCSFTPGS SLTAYKLTPSGYEWG+ N D G+NP GY+PTHYEKVQMLLSDRFLG++MVP NG WNYNF G + + +MK+ V L P+EYYHEDHRP HF F ++ DRED F+ Sbjct: 2176 NELPQLSPQDVTTHAKLLTDNISWDGEKTVMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKEYYHEDHRPVHFHNFKAFDDPLGTGSADREDAFA 2329
BLAST of EY757937 vs. ExPASy Swiss-Prot
Match: PRP8_DICDI (Pre-mRNA-processing-splicing factor 8 homolog OS=Dictyostelium discoideum GN=prpf8 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.547e-46 Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = 2 Query: 26 ELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNL 436 ELPQLSPQD+ +H++I+ +NK WDGEK +I++ S C+LTAY LTPSG+EWG+ NKD+ N GY P YEKVQMLLSDRFLGFYMVPD G WNYNFMGVKH+ +M YG+KL P+ +Y E HRP HF ++ + Sbjct: 2174 ELPQLSPQDVITHSKIMSDNKSWDGEKTVIISVSVA-WPCTLTAYHLTPSGFEWGKNNKDS-LNYQGYQPQFYEKVQMLLSDRFLGFYMVPDRGSWNYNFMGVKHSTNMTYGLKLDYPKNFYDESHRPAHFQNWTQM 2308
BLAST of EY757937 vs. ExPASy Swiss-Prot
Match: SPP42_SCHPO (Pre-mRNA-splicing factor spp42 OS=Schizosaccharomyces pombe GN=spp42 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.851e-33 Identity = 69/154 (44.81%), Postives = 96/154 (62.34%), Query Frame = 2 Query: 23 NELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPH-GYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEGEMAEGDREDTFS 481 +ELP LS D+T+HA+IL ++ +WD K + LT S+ PGS SL AY ++ G EWG N D S+ GY P+ EK Q+LLSDR GF++VP+ G WNYNF G + M Y +KL P ++ +HRPTH + ++ LE + E D D F+ Sbjct: 2211 SELPYLSSVDVTTHAKILSSHPEWD-TKAVTLTVSYIPGSISLAAYTVSKEGIEWGSKNMDINSDEAIGYEPSMAEKCQLLLSDRIQGFFLVPEEGVWNYNFNGASFSPKMTYSLKLDVPLPFFALEHRPTHVISYTELETNDRLEEDMPDAFA 2363
BLAST of EY757937 vs. ExPASy Swiss-Prot
Match: PRP8_YEAST (Pre-mRNA-splicing factor 8 OS=Saccharomyces cerevisiae GN=PRP8 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.837e-27 Identity = 62/161 (38.51%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 2 WVDPRVRNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSN-PHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEGEMAEGDREDTFS 481 W+ + EL ++ ++ +H+++ + K+ CI ++ TPGS SL+AY LT GY+WG NKD + G+ PT Q+LLSDR G +++P WNY FMG Y K G P E+Y+E HRP HFL+FS L E E ++ D FS Sbjct: 2258 WIHTQTE-ELKFMAASEVATHSKLFADKKR----DCIDISIFSTPGSVSLSAYNLTDEGYQWGEENKDIMNVLSEGFEPTFSTHAQLLLSDRITGNFIIPSGNVWNYTFMGTAFNQEGDYNFKYGIPLEFYNEMHRPVHFLQFSELAGDEELEAEQIDVFS 2413 The following BLAST results are available for this feature:
BLAST of EY757937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY757937 ID=EY757937; Name=EY757937; organism=Citrus sinensis; type=EST; length=767bpback to top |