EY757838

Overview
NameEY757838
Unique NameEY757838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757838 vs. ExPASy Swiss-Prot
Match: SPL1_ARATH (Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.981e-56
Identity = 119/223 (53.36%), Postives = 144/223 (64.57%), Query Frame = 2
Query:    2 SSTPRPALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR-PNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLCHQKLGYATASRSLVYKPAMLSMXXXXXXXXXXXLLFKSAPE 667
            SS+    L+EL LLHRAVRKNS+P+V++LLR++P +                 +  LFRPD  GPAGLTP+HIAAGKDGSEDVLDALT+DP MVGIEAWK  RDS+G TPEDYARLRGH+SYIHL+Q+KINK+     HVVV+I     D    + ++    ++ EI Q P       CKLC  KL Y T  RS+ Y+PAMLSM           LLFKS PE
Sbjct:  664 SSSSNATLSELCLLHRAVRKNSKPMVEMLLRYIPKQ----------------QRNSLFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTEDPAMVGIEAWKTCRDSTGFTPEDYARLRGHFSYIHLIQRKINKKSTTEDHVVVNIPVSFSDREQKEPKSGPMASALEITQIP-------CKLCDHKLVYGTTRRSVAYRPAMLSMVAIAAVCVCVALLFKSCPE 863          
BLAST of EY757838 vs. ExPASy Swiss-Prot
Match: SPL12_ARATH (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 121/226 (53.54%), Postives = 152/226 (67.26%), Query Frame = 2
Query:    8 TPRPALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNG-GHVVVDICGVVPDS-NIYQKQNNES---TASFEIGQTPVRPTQHNCKLC-HQKLGYATASRSLVYKPAMLSMXXXXXXXXXXXLLFKSAPE 667
            +P  AL+EL LLHRAVRKNS+P+V++LLRF P + +  L               LFRPD  GP GLTP+HIAAGKDGSEDVLDALT+DPGM GI+AWKN+RD++G TPEDYARLRGH+SYIHLVQ+K++++P    HVVV+I    P+S NI  KQ   S   ++S EI Q       + CKLC H+++   T  +S+ Y+PAMLSM           LLFKS PE
Sbjct:  707 SPDAALSELCLLHRAVRKNSKPMVEMLLRFSPKKKNQTLAG-------------LFRPDAAGPGGLTPLHIAAGKDGSEDVLDALTEDPGMTGIQAWKNSRDNTGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEHVVVNI----PESFNIEHKQEKRSPMDSSSLEITQI------NQCKLCDHKRVFVTTHHKSVAYRPAMLSMVAIAAVCVCVALLFKSCPE 909          
BLAST of EY757838 vs. ExPASy Swiss-Prot
Match: SPL6_ORYSJ (Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.652e-36
Identity = 91/224 (40.62%), Postives = 122/224 (54.46%), Query Frame = 2
Query:    2 SSTPRPALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLC-HQKLGYA-TASRSLVYKPAMLSMXXXXXXXXXXXLLFKSAPE 667
            S +P   +    LLH AVR  S  +V  LL + P E   R               FLFRPD  GP+  TP+HIAA  D +EDVLDALT+DPG+VGI  W+NARD +G TPEDYAR RG+ +Y+++V+KKINK    GHVV+ +   +    +          S EIG T V P   +C  C  Q L Y  + +R+ +Y+PAML++           LL  + P+
Sbjct:  743 SQSPEEVVLSENLLHAAVRMKSAQMVRFLLGYKPNESLKRTAET-----------FLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNARDGAGFTPEDYARQRGNDAYLNMVEKKINKHLGKGHVVLGVPSSI--HPVITDGVKPGEVSLEIGMT-VPPPAPSCNACSRQALMYPNSTARTFLYRPAMLTVMGIAVICVCVGLLLHTCPK 952          
BLAST of EY757838 vs. ExPASy Swiss-Prot
Match: SPL1_ORYSJ (Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.205e-31
Identity = 84/220 (38.18%), Postives = 117/220 (53.18%), Query Frame = 2
Query:   38 LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG----FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTAS------FEIGQTPVRPTQHNCKLCHQKLGYA-TASRSLVYKPAMLSMXXXXXXXXXXXLLFKSAP 664
            L+  AV K S+PL+D LL +          + + A +DG        FLF PD+ GP+ +TP+HIAA    +  VLDALTDDP  +GI+AWKNARD++G TPEDYAR RGH SYI +VQ KI+ R    HV V I      ++  +K  ++S  +       E GQ        +C+ C  +L Y    +R L  +PA+LS+           L+ +  P
Sbjct:  634 LVFVAVNKRSKPLIDFLLTY----------TTSSAPMDGTESAAPAQFLFTPDIAGPSDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWKNARDATGLTPEDYARKRGHESYIEMVQNKIDSRLPKAHVSVTISSTTSTTDFTEKHASQSKTTDQTAFDVEKGQQISTKPPLSCRQCLPELAYRHHLNRFLSTRPAVLSLVAIAAVCVCVGLIMQGPP 843          
BLAST of EY757838 vs. ExPASy Swiss-Prot
Match: SPL14_ARATH (Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.702e-21
Identity = 58/164 (35.37%), Postives = 97/164 (59.15%), Query Frame = 2
Query:   23 LTELGLLHRAVRKNSRPLVDLLLRFV--PLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI----NKRP--NGGHVVVDICGVVPDSNIYQKQNNESTAS 490
            L E+ LL+RAV++ S  +V+LL+ ++  PL +S               + F+F P++ GP G+TP+H+AA   GS+D++D LT+DP  +G+ +W   RD++G TP  YA +R +++Y  LV +K+    NK+   N  H VVD  G+    ++   +++ S AS
Sbjct:  822 LAEIQLLNRAVKRKSTKMVELLIHYLVNPLTLSSS-------------RKFVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNKQVSLNIEHEVVDQTGLSKRLSLEMNKSSSSCAS 972          
BLAST of EY757838 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSJ (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.483e-19
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 2
Query:   23 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN 406
            L+E+ LL+RAV++ S  +  LL++FV +   D              K + F P+V GP GLTP+H+AA  + + D++DALTDDP  +G+  W +A D  G +PE YA+LR + +Y  LV +K+  R N
Sbjct:  925 LSEIHLLNRAVKRKSSHMARLLVQFVVVCPDDS-------------KLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDRKN 1039          
BLAST of EY757838 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSI (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.483e-19
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 2
Query:   23 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN 406
            L+E+ LL+RAV++ S  +  LL++FV +   D              K + F P+V GP GLTP+H+AA  + + D++DALTDDP  +G+  W +A D  G +PE YA+LR + +Y  LV +K+  R N
Sbjct:  925 LSEIHLLNRAVKRKSSHMARLLVQFVVVCPDDS-------------KLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDRKN 1039          
BLAST of EY757838 vs. ExPASy Swiss-Prot
Match: SPL16_ARATH (Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.995e-17
Identity = 41/129 (31.78%), Postives = 73/129 (56.59%), Query Frame = 2
Query:   23 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNG 409
            L ++ LL+RA+++ +  + + L+ +                V+   + F+F P + GP  +TP+H+AA    S+D++DALT+DP  +G+  W    D++G TP  YA +R ++SY  LV +K+  + NG
Sbjct:  783 LADIQLLNRAIKRRNTKMAETLIHYS---------------VNPSTRNFIFLPSIAGPGDITPLHLAASTSSSDDMIDALTNDPQEIGLSCWNTLVDATGQTPFSYAAMRDNHSYNTLVARKLADKRNG 896          
The following BLAST results are available for this feature:
BLAST of EY757838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SPL1_ARATH1.981e-5653.36Squamosa promoter-binding-like protein 1 OS=Arabid... [more]
SPL12_ARATH3.162e-5453.54Squamosa promoter-binding-like protein 12 OS=Arabi... [more]
SPL6_ORYSJ8.652e-3640.63Squamosa promoter-binding-like protein 6 OS=Oryza ... [more]
SPL1_ORYSJ2.205e-3138.18Squamosa promoter-binding-like protein 1 OS=Oryza ... [more]
SPL14_ARATH2.702e-2135.37Squamosa promoter-binding-like protein 14 OS=Arabi... [more]
SPL15_ORYSJ1.483e-1939.84Squamosa promoter-binding-like protein 15 OS=Oryza... [more]
SPL15_ORYSI1.483e-1939.84Squamosa promoter-binding-like protein 15 OS=Oryza... [more]
SPL16_ARATH8.995e-1731.78Squamosa promoter-binding-like protein 16 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-028-B01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757838 ID=EY757838; Name=EY757838; organism=Citrus sinensis; type=EST; length=894bp
TTCGTCGACCCCGCGTCCGGCACTGACAGAGCTGGGACTTCTTCACAGAG
CTGTGAGGAAAAATTCTCGTCCTCTGGTGGATCTCCTTTTGAGATTTGTT
CCGCTAGAAGTTTCTGATAGATTAGGATCTGAAAACAAGGCACTTGTTGA
TGGTGTCCATAAAGGCTTCTTGTTTAGACCTGATGTCATTGGCCCTGCAG
GTTTGACCCCAATTCACATTGCAGCTGGTAAGGATGGCTCTGAGGATGTA
CTGGATGCATTAACTGATGATCCTGGAATGGTGGGAATTGAAGCGTGGAA
GAATGCTCGTGACAGCTCAGGCTCTACACCCGAAGATTATGCTCGTTTGC
GTGGCCACTATTCATACATCCACCTGGTACAGAAGAAGATTAATAAGAGA
CCAAATGGTGGACACGTAGTAGTGGACATATGTGGTGTTGTTCCTGACTC
TAACATATACCAGAAGCAAAATAATGAGTCGACTGCCAGTTTTGAGATTG
GGCAGACTCCAGTAAGACCCACGCAGCATAACTGCAAGCTCTGCCATCAG
AAGTTGGGTTATGCAACAGCCAGCAGATCTCTTGTGTACAAACCTGCTAT
GCTCTCAATGGTGGCTATTGCTGCTGTCTGTGTGTGCGTGGCTCTTCTAT
TTAAAAGTGCCCCTGAGTTCTGTATGTGNTCCGTCCATTCAGATGGGAAA
TGCTGGACTATGNAACAAGCTGAATTCCATTTCCAAGCTGAATTCCATCA
CTCCTACTTTGATATAACAGCTTGCTATAAGGNGTTGNGTACTTGNATGC
GATGGAAGATGTAGATTGGAAATCTATTTAACCAGCTTGTACTGATTCGG
ATCGATATATCTTGGCTATTTTTATTTTATTTACCTTCTGGGNA
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