EY757836 | Citrus Genome Database

Overview


Name	EY757836
Unique Name	EY757836
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	907

Libraries


Library Name	Type
Sweet orange leaf, field plant B	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig8139	contig	Csv1_Contig8139:228..1137.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.451e-115
Identity = 168/211 (79.62%), Postives = 189/211 (89.57%), Query Frame = 2

Query:   14 GMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            G+YK AKV FCIHNIAYQGRFAF DF  LNLP +FKSSFDFIDGY KPV+GRKINWMKAGILESD VLTVSP+YAQE++SG ++GVELDN IRKTGI GI+NGMDVQEWNP+TDKYI + YDA+TVMDAKPLLKEALQAEVGLPVDRN+P+IGFIGRLEEQKGSDI  AAI   ++ NVQI++LGTGKK  EKQ+E LE+LYP+KARGVAK
Sbjct:  251 GIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDFIDGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGIINGMDVQEWNPVTDKYIDIHYDATTVMDAKPLLKEALQAEVGLPVDRNVPLIGFIGRLEEQKGSDIFVAAISQLVEHNVQIVILGTGKKKFEKQIEHLEVLYPDKARGVAK 461

HSP 2 Score: 58.5362 bits (140), Expect = 1.451e-115
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 1

Query:  619 P*ESQRSSEINIPLAHMIIAGADFILIPSRFEPCGLIQ 732
            P +++  ++ N+PLAHMI AGADF+L+PSRFEPCGLIQ
Sbjct:  453 PDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQ 490

HSP 3 Score: 48.521 bits (114), Expect = 1.451e-115
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 3

Query:  732 IHAMRYGTVPIVASTGGLXDTVKE 803
            +HAMRYGTVPIVASTGGL DTVKE
Sbjct:  491 LHAMRYGTVPIVASTGGLVDTVKE 514

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 1.838e-109
Identity = 165/215 (76.74%), Postives = 184/215 (85.58%), Query Frame = 2

Query:    2 HASEGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            + S+GMY  AKV FCIHNIAYQGRF   DF LLNLP QFKSSFDF DGY KPV+GRKINWMKAGILESD V+TVSP+YA ELVSG +KGVELDN+I KT I GIVNGMD QEWNP TDK+I   YD +TVMDAKPLLKEALQA VGLPVD+NIPVIGFIGRLEEQKGSDIL AAI  F+  +VQII+LGTGKK  E+Q+++LE+LYP+KARGVAK
Sbjct:  247 YQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFDGYEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNGMDTQEWNPATDKHIDTNYDITTVMDAKPLLKEALQAAVGLPVDKNIPVIGFIGRLEEQKGSDILVAAISKFVGLDVQIIILGTGKKKFEQQIQELEVLYPDKARGVAK 461

HSP 2 Score: 58.5362 bits (140), Expect = 1.838e-109
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 1

Query:  619 P*ESQRSSEINIPLAHMIIAGADFILIPSRFEPCGLIQ 732
            P +++  ++ N+PLAHMI AGADF+L+PSRFEPCGLIQ
Sbjct:  453 PDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQ 490

HSP 3 Score: 43.8986 bits (102), Expect = 1.838e-109
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 3

Query:  732 IHAMRYGTVPIVASTGGLXDTVKE 803
            +HAMRYGT+PI ASTGGL DTV E
Sbjct:  491 LHAMRYGTIPICASTGGLVDTVTE 514

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 4.071e-109
Identity = 163/215 (75.81%), Postives = 185/215 (86.05%), Query Frame = 2

Query:    2 HASEGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            + S G+Y +AKV FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDGY KPV+GRKINWMKAGILES  V+TVSP+YAQELVS  DKGVELD+++RKT I GIVNGMD QEWNP TDKY  VKYD +TVMDAKPLLKEALQA VGLPVD+ IP+IGFIGRLEEQKGSDIL AAI  FI  +VQI+VLGTGKK  E+++EQLE+LYP KA+GVAK
Sbjct:  246 YQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDGYEKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGMDTQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAVGLPVDKKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKEFEQEIEQLEVLYPNKAKGVAK 460

HSP 2 Score: 58.5362 bits (140), Expect = 4.071e-109
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 1

Query:  619 P*ESQRSSEINIPLAHMIIAGADFILIPSRFEPCGLIQ 732
            P +++  ++ N+PLAHMI AGADF+L+PSRFEPCGLIQ
Sbjct:  452 PNKAKGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQ 489

HSP 3 Score: 46.595 bits (109), Expect = 4.071e-109
Identity = 21/24 (87.50%), Postives = 22/24 (91.67%), Query Frame = 3

Query:  732 IHAMRYGTVPIVASTGGLXDTVKE 803
            +HAMRYGTVPI ASTGGL DTVKE
Sbjct:  490 LHAMRYGTVPICASTGGLVDTVKE 513

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2)

HSP 1 Score: 331.643 bits (849), Expect = 6.262e-107
Identity = 162/215 (75.35%), Postives = 183/215 (85.12%), Query Frame = 2

Query:    2 HASEGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            + S G+Y +AKV FCIHNIAYQGRFAF DF LLNLP ++K SFDFIDGY+KPV+GRKINWMKAGI E+D V TVSP+YA+ELVS   KGVELDN IR  GI GI NGMD QEWNP TDKY+ VKYD +TVM AKPLLKEALQA VGLPVDRNIP+IGFIGRLEEQKGSDIL AAI  FI  +VQI++LGTGKK  E+Q+EQLE++YP+KARGVAK
Sbjct:  247 YQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFIDGYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICNGMDTQEWNPATDKYLAVKYDITTVMQAKPLLKEALQAAVGLPVDRNIPLIGFIGRLEEQKGSDILYAAISKFISMDVQILILGTGKKKFEQQIEQLEVMYPDKARGVAK 461

HSP 2 Score: 58.9214 bits (141), Expect = 6.262e-107
Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 1

Query:  619 P*ESQRSSEINIPLAHMIIAGADFILIPSRFEPCGLIQ 732
            P +++  ++ N+PLAHMI AGADF+LIPSRFEPCGLIQ
Sbjct:  453 PDKARGVAKFNVPLAHMITAGADFMLIPSRFEPCGLIQ 490

HSP 3 Score: 40.4318 bits (93), Expect = 6.262e-107
Identity = 19/24 (79.17%), Postives = 20/24 (83.33%), Query Frame = 3

Query:  732 IHAMRYGTVPIVASTGGLXDTVKE 803
            +HAMRYGT  I ASTGGL DTVKE
Sbjct:  491 LHAMRYGTPCICASTGGLVDTVKE 514

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 4.721e-104
Identity = 153/215 (71.16%), Postives = 179/215 (83.26%), Query Frame = 2

Query:    2 HASEGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            + S G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP  FKSSFDF+DGY KPV+GRKINWMKA ILE+  VLTVSP+YAQEL+SG D+GVEL   +R   + GI+NGMDVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGSDIL  AI  F+  NVQ+++LGTGKK ME Q+ +LE  +P KA GVAK
Sbjct:  249 YQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAK 463

HSP 2 Score: 58.151 bits (139), Expect = 4.721e-104
Identity = 24/31 (77.42%), Postives = 29/31 (93.55%), Query Frame = 1

Query:  640 SEINIPLAHMIIAGADFILIPSRFEPCGLIQ 732
            ++ N+PLAHMI AGADFI++PSRFEPCGLIQ
Sbjct:  462 AKFNVPLAHMITAGADFIIVPSRFEPCGLIQ 492

HSP 3 Score: 47.3654 bits (111), Expect = 4.721e-104
Identity = 21/24 (87.50%), Postives = 23/24 (95.83%), Query Frame = 3

Query:  732 IHAMRYGTVPIVASTGGLXDTVKE 803
            +HAMRYGTVPIVASTGGL DTVK+
Sbjct:  493 LHAMRYGTVPIVASTGGLVDTVKD 516

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 4.358e-98
Identity = 159/215 (73.95%), Postives = 180/215 (83.72%), Query Frame = 2

Query:    2 HASEGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            + S G+YK+AKV FCIHNIAYQGR AF DF LLNLP +F+SSFDFIDGYNKP  G+KINWMKAGILESD V TVSPHYA+EL+SGED+GVELDNIIR TGI GIVNGMD +EW+P TD+YI V Y+ +TV +AKPLLK  LQAE+GLPVD +IP+IGFIGRLEEQKGSDIL  AI  F  ENVQI+VLGTGKK MEKQ+E LE  YP KA G+ K
Sbjct:  242 YKSRGLYKNAKVAFCIHNIAYQGRNAFSDFSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDRGVELDNIIRSTGIIGIVNGMDNREWSPQTDRYIDVHYNETTVTEAKPLLKGTLQAEIGLPVDSSIPLIGFIGRLEEQKGSDILVEAIAKFADENVQIVVLGTGKKIMEKQIEVLEEKYPGKAIGITK 456

HSP 2 Score: 55.8398 bits (133), Expect = 4.358e-98
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 1

Query:  640 SEINIPLAHMIIAGADFILIPSRFEPCGLIQY--MPCVMEPYLS 765
            ++ N PLAH IIAGADFI+IPSRFEPCGL+Q   MP    P +S
Sbjct:  455 TKFNSPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVS 498

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.671e-94
Identity = 148/216 (68.52%), Postives = 173/216 (80.09%), Query Frame = 2

Query:    2 HASEGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK-GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            +   G+Y++AKV FCIHNIAYQGRF   DF LLNLP  F  SFDF+DG+ KPV GRKINWMKAGI E D+VLTVSPHY +EL SG +KGVELD ++R   ++ GIVNGMDV +WNP TDKYI VKY+A+TV  A+ L KE LQAEVGL VD +IPVI FIGRLEEQKGSDIL AA P F++ENVQIIVLGTGKK ME++L  LE+ YP+ ARG+AK
Sbjct:  203 YKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFDFVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLETGIVNGMDVIDWNPATDKYISVKYNATTVAQARALNKEILQAEVGLSVDSSIPVIVFIGRLEEQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAK 418

HSP 2 Score: 58.151 bits (139), Expect = 1.671e-94
Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 1

Query:  619 P*ESQRSSEINIPLAHMIIAGADFILIPSRFEPCGLIQ 732
            P  ++  ++ N+PLAHM+ AGADFI+IPSRFEPCGLIQ
Sbjct:  410 PQNARGIAKFNVPLAHMMFAGADFIIIPSRFEPCGLIQ 447

HSP 3 Score: 35.8094 bits (81), Expect = 1.671e-94
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3

Query:  732 IHAMRYGTVPIVASTGGLXDTVKEAL 809
            +  M YG VPI +STGGL DTV+E +
Sbjct:  448 LQGMSYGVVPICSSTGGLVDTVREGV 473

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 8.176e-94
Identity = 148/211 (70.14%), Postives = 174/211 (82.46%), Query Frame = 2

Query:   14 GMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            G+Y++AKV FCIHNI+YQGRFAFED+  LNL  +FKSSFDFIDGY+ PV GRKINWMKAGILESD VLTVSP+YA+EL+SG  +G ELDNI+R TGI GIVNGMDV EW+P  DKYI  KYDA+T ++AK L KEALQAE GLPVDR +P+I FIGRLEEQKG D++AAAIP  ++ENVQI++LGTGKK  EK L+ +E  YP K R V K
Sbjct:  249 GIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFKSSFDFIDGYDTPVEGRKINWMKAGILESDRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITTKYDATTAIEAKALNKEALQAEAGLPVDRKVPLIAFIGRLEEQKGPDVMAAAIPELMQENVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVK 459

HSP 2 Score: 51.2174 bits (121), Expect = 8.176e-94
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 1

Query:  643 EINIPLAHMIIAGADFILIPSRFEPCGLIQ 732
            + N PLAH+I+AGAD + +PSRFEPCGLIQ
Sbjct:  459 KFNAPLAHLIMAGADVLAVPSRFEPCGLIQ 488

HSP 3 Score: 30.8018 bits (68), Expect = 8.176e-94
Identity = 15/24 (62.50%), Postives = 16/24 (66.67%), Query Frame = 3

Query:  732 IHAMRYGTVPIVASTGGLXDTVKE 803
            +  MRYGT    ASTGGL DTV E
Sbjct:  489 LQGMRYGTPCACASTGGLVDTVIE 512

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSJ (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 1.155e-92
Identity = 146/211 (69.19%), Postives = 174/211 (82.46%), Query Frame = 2

Query:   14 GMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            G+Y++AKV FCIHNI+YQGRFAFED+  LNL  +F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG  +G ELDNI+R TGI GIVNGMDV EW+P  DKYI  KYDA+T ++AK L KEALQAE GLPVDR IP+I FIGRLEEQKG D++AAAIP  ++E+VQI++LGTGKK  EK L+ +E  YP K R V K
Sbjct:  252 GIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVK 462

HSP 2 Score: 51.2174 bits (121), Expect = 1.155e-92
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 1

Query:  643 EINIPLAHMIIAGADFILIPSRFEPCGLIQ 732
            + N PLAH+I+AGAD + +PSRFEPCGLIQ
Sbjct:  462 KFNAPLAHLIMAGADVLAVPSRFEPCGLIQ 491

HSP 3 Score: 30.8018 bits (68), Expect = 1.155e-92
Identity = 15/24 (62.50%), Postives = 16/24 (66.67%), Query Frame = 3

Query:  732 IHAMRYGTVPIVASTGGLXDTVKE 803
            +  MRYGT    ASTGGL DTV E
Sbjct:  492 LQGMRYGTPCACASTGGLVDTVIE 515

[Close]

BLAST of EY757836 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=WAXY PE=3 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 1.155e-92
Identity = 146/211 (69.19%), Postives = 174/211 (82.46%), Query Frame = 2

Query:   14 GMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 646
            G+Y++AKV FCIHNI+YQGRFAFED+  LNL  +F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG  +G ELDNI+R TGI GIVNGMDV EW+P  DKYI  KYDA+T ++AK L KEALQAE GLPVDR IP+I FIGRLEEQKG D++AAAIP  ++E+VQI++LGTGKK  EK L+ +E  YP K R V K
Sbjct:  252 GIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVK 462

HSP 2 Score: 51.2174 bits (121), Expect = 1.155e-92
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 1

Query:  643 EINIPLAHMIIAGADFILIPSRFEPCGLIQ 732
            + N PLAH+I+AGAD + +PSRFEPCGLIQ
Sbjct:  462 KFNAPLAHLIMAGADVLAVPSRFEPCGLIQ 491

HSP 3 Score: 30.8018 bits (68), Expect = 1.155e-92
Identity = 15/24 (62.50%), Postives = 16/24 (66.67%), Query Frame = 3

Query:  732 IHAMRYGTVPIVASTGGLXDTVKE 803
            +  MRYGT    ASTGGL DTV E
Sbjct:  492 LQGMRYGTPCACASTGGLVDTVIE 515

The following BLAST results are available for this feature:

BLAST of EY757836 vs. ExPASy Swiss-Prot

BLAST of EY757836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 361


Match Name	E-value	Identity	Description
SSG1_MANES	1.451e-115	79.62	Granule-bound starch synthase 1, chloroplastic/amy...	[more]
SSG1_ANTMA	1.838e-109	76.74	Granule-bound starch synthase 1, chloroplastic/amy...	[more]
SSG1_SOLTU	4.071e-109	75.81	Granule-bound starch synthase 1, chloroplastic/amy...	[more]
SSG1_IPOBA	6.262e-107	75.35	Granule-bound starch synthase 1, chloroplastic/amy...	[more]
SSG1_ARATH	4.721e-104	71.16	Probable granule-bound starch synthase 1, chloropl...	[more]
SSG1_PEA	4.358e-98	73.95	Granule-bound starch synthase 1, chloroplastic/amy...	[more]
SSG1B_HORVU	1.671e-94	68.52	Granule-bound starch synthase 1b, chloroplastic/am...	[more]
SSG1_ORYSA	8.176e-94	70.14	Granule-bound starch synthase 1, chloroplastic/amy...	[more]
SSG1_ORYSJ	1.155e-92	69.19	Granule-bound starch synthase 1, chloroplastic/amy...	[more]
SSG1_ORYSI	1.155e-92	69.19	Granule-bound starch synthase 1, chloroplastic/amy...	[more]

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Properties


Property Name	Value
Genbank description	CS13-C1-001-028-A11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY757836 ID=EY757836; Name=EY757836; organism=Citrus sinensis; type=EST; length=907bp
CCACGCGTCCGAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCC
ACAATATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTC
AACCTTCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAA
TAAACCTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATCAA
TATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTC
CAAGCAGATTTGAACCTTGTGGTCTCATTCAATACATGCCATGCGTTATG
GAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGNTGACACTGTGAAA
GAAGCTTTACAGGATCCAGATGGGAGCTTCANTGTGACTGGGAGCTGTGG
ATCCANAAATGGGCTGCAGTGTCACAACGTCAGAAGACTCTTGCACTATG
TACTCAG