EY757826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.316e-70 Identity = 117/150 (78.00%), Postives = 133/150 (88.67%), Query Frame = 3 Query: 21 SSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPGV 470 S+ FP TKK NND +S+ SNGG VQCMKVWPP GLKK+ETLSYLPPLSDEAL KEI YL+R+ WIPCLEFELE G+VYREHH SPGYYDGRYWTMWKLPM+GCTD+ QV+KEVGE +KEYP++F+R+IGFDN RQVQCISF+ AKPPGV Sbjct: 31 SNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPGV 180
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.299e-66 Identity = 117/154 (75.97%), Postives = 131/154 (85.06%), Query Frame = 3 Query: 9 TTRPSSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPGV 470 T S+S FP T+KTNNDITSIASNGG VQCM+VWPP GLKKFETLSYLPPLS E L KE+ YLLR IPCLEFELE G+VYREH+ SPGYYDGRYWTMWKLPM+GC D++QVLKE+ E +K YP +F+RIIGFDNKRQVQ ISF+A KPPGV Sbjct: 29 TCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPGV 182
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.781e-66 Identity = 115/149 (77.18%), Postives = 130/149 (87.25%), Query Frame = 3 Query: 21 SSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 467 SSS FP T+K+N DITSIASNGG VQCM+VWPP GLKKFETLSYLPPLS E+L KE+ YLLR W+PCLEFELE G+VYRE+H SPGYYDGRYWTMWKLPM+GCTD++QVLKE+ E +K YP SF+RIIGFDN RQVQCISF+A KP G Sbjct: 35 SSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS_RAPSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.180e-65 Identity = 112/148 (75.68%), Postives = 127/148 (85.81%), Query Frame = 3 Query: 21 SSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 464 SS+ FP T+KTN DITSIASNGG V CMKVWPP G KKFETLSYLP LSD L KE+ YLLR+ WIPC+EFELE G+VYREH S+PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP++ +RIIGFDN RQVQCISF+A KPP Sbjct: 29 SSAAFPVTRKTNTDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.180e-65 Identity = 114/149 (76.51%), Postives = 129/149 (86.58%), Query Frame = 3 Query: 21 SSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 467 SSS P T+K+N DITSIASNGG VQCM+VWPP GLKKFETLSYLPPLS E+L KE+ YLLR W+PCLEFELE G+VYRE+H SPGYYDGRYWTMWKLPM+GCTD++QVLKE+ E +K YP SF+RIIGFDN RQVQCISF+A KP G Sbjct: 35 SSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2) HSP 1 Score: 247.284 bits (630), Expect = 5.459e-65 Identity = 112/148 (75.68%), Postives = 127/148 (85.81%), Query Frame = 3 Query: 21 SSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 464 SS+ FP T+KTN DITSIASNGG V CMKVWPP G KKFETLSYLP LSD L KE+ YLLR+ WIPC+EFELE G+VYREH ++PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCISF+A KPP Sbjct: 29 SSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS1A_ARATH (Ribulose bisphosphate carboxylase small chain 1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2) HSP 1 Score: 247.284 bits (630), Expect = 5.459e-65 Identity = 110/148 (74.32%), Postives = 128/148 (86.49%), Query Frame = 3 Query: 21 SSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 464 SS+ FPAT+K NNDITSI SNGG V CM+VWPP G KKFETLSYLP L+D L KE+ YL+R+ WIPC+EFELE G+VYREH +SPGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 29 SSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 9.312e-65 Identity = 110/147 (74.83%), Postives = 128/147 (87.07%), Query Frame = 3 Query: 21 SSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 461 SS+ FP TKKTNNDITSIASNGG V CM+VWPP G KKFETLSYLPPL++E L KE+ YL+R GWIPCLEFELEKG+VYRE+H SPGYYDGRYWTMW+LP++G TD++QVLKE+ + + EYP SF+RIIGFDN RQVQCISF+A P Sbjct: 31 SSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.216e-64 Identity = 112/148 (75.68%), Postives = 128/148 (86.49%), Query Frame = 3 Query: 21 SSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 464 S++ FPAT+K+NNDITS+ASNGG VQCMKVWPP GL+KFETLSYLPPLS E+L K+I YL+ GWIPCLEFELE +VYRE++ SPGYYDGRYW MWKLPM+GCTDATQVL E+ E K YP S +RIIGFDNKRQVQCISF+A KPP Sbjct: 33 STAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
BLAST of EY757826 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 1.588e-64 Identity = 111/148 (75.00%), Postives = 126/148 (85.14%), Query Frame = 3 Query: 21 SSSCFPATKKTNNDITSIASNGGPVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 464 SS+ FP T+K NNDITSI SNGG V CMKVWPP G KKFETLSYLP LSD L KE+ YLLR+ WIPC+EFELE G+VYREH ++PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCISF+A KPP Sbjct: 29 SSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176 The following BLAST results are available for this feature:
BLAST of EY757826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >EY757826 ID=EY757826; Name=EY757826; organism=Citrus sinensis; type=EST; length=671bpback to top |