EY757824

Overview
NameEY757824
Unique NameEY757824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL261_ARATH (60S ribosomal protein L26-1 OS=Arabidopsis thaliana GN=RPL26A PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.420e-28
Identity = 64/101 (63.37%), Postives = 71/101 (70.30%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXXXXXXXXXXXXXTKFTPEDIMQSVD 310
            S+P+ +DDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI PSKVVIT                           TKFT ED+MQ+VD
Sbjct:   46 SMPIRKDDEVQIVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLERKAKGRAAADKEKGTKFTSEDVMQNVD 146          
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL262_ARATH (60S ribosomal protein L26-2 OS=Arabidopsis thaliana GN=RPL26B PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.748e-25
Identity = 59/101 (58.42%), Postives = 70/101 (69.31%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXXXXXXXXXXXXXTKFTPEDIMQSVD 310
            S+P+ +DDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N S V+IT                           TKF+ ED+M++VD
Sbjct:   46 SMPIRKDDEVQVVRGTFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLERKANGRAAADKEKGTKFSAEDVMENVD 146          
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL26_BRARA (60S ribosomal protein L26 OS=Brassica rapa GN=RPL26 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.121e-23
Identity = 55/100 (55.00%), Postives = 66/100 (66.00%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXXXXXXXXXXXXXTKFTPEDIMQSV 307
            S+P+ +DDE Q+VRGTYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P+KVVIT                           TKFT  D+MQ+V
Sbjct:   46 SMPIRKDDEXQIVRGTYKGREGKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLERKAKGRAAADKDKGTKFTAVDVMQNV 145          
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL26_MOUSE (60S ribosomal protein L26 OS=Mus musculus GN=Rpl26 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 190
            S+P+ +DDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT
Sbjct:   46 SMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107          
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL26_MACFA (60S ribosomal protein L26 OS=Macaca fascicularis GN=RPL26 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 190
            S+P+ +DDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT
Sbjct:   46 SMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107          
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL26_HUMAN (60S ribosomal protein L26 OS=Homo sapiens GN=RPL26 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 190
            S+P+ +DDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT
Sbjct:   46 SMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107          
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL26_CHICK (60S ribosomal protein L26 (Fragment) OS=Gallus gallus GN=RPL26 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 190
            S+P+ +DDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT
Sbjct:   29 SMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 90          
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL26_BOVIN (60S ribosomal protein L26 OS=Bos taurus GN=RPL26 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 190
            S+P+ +DDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT
Sbjct:   46 SMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107          
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL26_AILME (60S ribosomal protein L26 OS=Ailuropoda melanoleuca GN=RPL26 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 190
            S+P+ +DDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT
Sbjct:   46 SMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107          
BLAST of EY757824 vs. ExPASy Swiss-Prot
Match: RL26L_HUMAN (60S ribosomal protein L26-like 1 OS=Homo sapiens GN=RPL26L1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 2
Query:    8 SVPVCQDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 190
            S+P+ +DDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT
Sbjct:   46 SMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107          
The following BLAST results are available for this feature:
BLAST of EY757824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
RL261_ARATH6.420e-2863.3760S ribosomal protein L26-1 OS=Arabidopsis thalian... [more]
RL262_ARATH1.748e-2558.4260S ribosomal protein L26-2 OS=Arabidopsis thalian... [more]
RL26_BRARA8.121e-2355.0060S ribosomal protein L26 OS=Brassica rapa GN=RPL2... [more]
RL26_MOUSE6.022e-1872.5860S ribosomal protein L26 OS=Mus musculus GN=Rpl26... [more]
RL26_MACFA6.022e-1872.5860S ribosomal protein L26 OS=Macaca fascicularis G... [more]
RL26_HUMAN6.022e-1872.5860S ribosomal protein L26 OS=Homo sapiens GN=RPL26... [more]
RL26_CHICK6.022e-1872.5860S ribosomal protein L26 (Fragment) OS=Gallus gal... [more]
RL26_BOVIN6.022e-1872.5860S ribosomal protein L26 OS=Bos taurus GN=RPL26 P... [more]
RL26_AILME6.022e-1872.5860S ribosomal protein L26 OS=Ailuropoda melanoleuc... [more]
RL26L_HUMAN6.022e-1872.5860S ribosomal protein L26-like 1 OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-027-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757824 ID=EY757824; Name=EY757824; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGTGCCTGTGTGCCAGGACGACGAGGTTCAGGTTGTGCGTG
GGACCTACAAGGGGCGCGAGGGCAAAGTCGTTCAAGTGTATCGCCGGAAG
TGGGTCATTCACATCGAGCGCATCACTCGCGAGAAGGTTAATGGATCCAC
TGTGAATGTGGGAATCAACCCATCAAAGGTCGTGATCACCAAGCTCCGTC
TGGACAAGGACAGGAAGTCTTTGCTCGATCGCAAGGCCAAGGGACGTGCC
GCCGCCGACAAGGAGAAGGGTACCAAGTTCACCCCAGAGGATATTATGCA
GAGCGTTGACTAATTTTGATAAGAGGTTGTTTTTAAAGTTTTTGTTTAAT
CATAGAATTTATGGATTTAGGATGTTTTGTTTTGGCAATGTCACTAAGAT
ATTTCTATTGTTATTGTGTTATGTCATGAGGATCCGATTATGGGCTTATG
TTGGAGATTTAAGATACTTCTTTGGAAANANNAAAAAAAAAAAAAAAAAA
AAAGGCGGCCGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTNAAAAATAAC
AAGACAAGCCCTATCTTATTTAAAAAGGCAGCTCATAGAAAGACATAAAA
AACAGTTCTTCAAGAACCACCACCGGAGACCCGATCCGACCCGAACAAGT
AACATAGCAGGAAAATTTGATAAAGATTAAAAGTCCTACAGACCCCCCCC
CATAATAATAGATAACATAATCATCATCACGATCCCGATCAGACGGCTCG
GGATGATGGCGATCCTTATCATGATCCAATCTTAGACAATTGACCGGCAT
CAGCGATCACCAAGGGCTTGGTGGGCCTTGCGGAGCTGGACCCACCTTTC
TCGATGGCCTTGACAACCCCCTCTC
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