EY757765

Overview
NameEY757765
Unique NameEY757765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4228 contig Csv1_Contig4228:498..1386. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: HM13_MOUSE (Minor histocompatibility antigen H13 OS=Mus musculus GN=Hm13 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.828e-55
Identity = 127/274 (46.35%), Postives = 168/274 (61.31%), Query Frame = 1
Query:   13 VNAVLTCYFFVLGIIALSATILPAVKRFLPNHWNE---DLIIWHFPYFRSLEI---EFTRSQIIAAIPGTFFCAWYASQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTRD------TARPFSMLGLGDIVIPGIFVALALRFDVSRGKGSR-YFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWDGEVKQXLEFDESK----TAACVSQERAMPKLARRRI 783
            +N +L+ YFFVLGI+ALS TI P + +F P ++      L+          EI   EF    ++     +    WY  +KHW+ANN  GLAF + G+E+L L +  TG ILL GLF+YDIFWVF T VMV+VAKSF+APIKL+FP +D       A  F+MLGLGDIVIPGIF+AL LRFD+S  K +  YF ++F  Y  GL LTI +M+ F+ AQPALLY+VPA IGF     +  GEV +   ++ES      A   S+E +    A +R+
Sbjct:  101 INLLLSMYFFVLGILALSHTISPFMNKFFPANFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSVVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDIFWVFGTNVMVTVAKSFEAPIKLVFP-QDLLEKGLEADNFAMLGLGDIVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVAEMFSYEESNPKDPAAETESKEESTEASASKRL 373          
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: HM13_HUMAN (Minor histocompatibility antigen H13 OS=Homo sapiens GN=HM13 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.694e-55
Identity = 123/262 (46.95%), Postives = 164/262 (62.60%), Query Frame = 1
Query:   13 VNAVLTCYFFVLGIIALSATILPAVKRFLPNHWNE---DLIIWHFPYFRSLEI---EFTRSQIIAAIPGTFFCAWYASQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTRD------TARPFSMLGLGDIVIPGIFVALALRFDVSRGKGSR-YFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWDGEVKQXLEFDES--KTAACVSQER 753
            +N +L+ YFFVLGI+ALS TI P + +F P  +      L+          EI   EF    ++     +    WY  +KHW+ANN  GLAF + G+E+L L +  TG ILL GLF+YD+FWVF T VMV+VAKSF+APIKL+FP +D       A  F+MLGLGD+VIPGIF+AL LRFD+S  K +  YF ++F  Y  GL LTI +M+ F+ AQPALLY+VPA IGF     +  GEV +   ++ES  K  A V++ +
Sbjct:  101 INLLLSMYFFVLGILALSHTISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPIKLVFP-QDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESNPKDPAAVTESK 361          
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: IMP2_CAEEL (Intramembrane protease 2 OS=Caenorhabditis elegans GN=imp-2 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.842e-38
Identity = 95/209 (45.45%), Postives = 121/209 (57.89%), Query Frame = 1
Query:  157 EIEFTRSQIIAAIPGTFFCAWYASQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTR------DTARPFSMLGLGDIVIPGIFVALALRFD-----------VSRG--KGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWDGEVKQXLEFDESK 726
            +I+F R  IIA +  +     +  ++HW+ NN +G++F I GIE L L SFK G++LL GLF YDIFWVF T VM SVAK  DAPI L FP          A   SMLGLGDIVIPGIF+AL  RFD             +G  KG  YF    + Y  GL +T+ VM+ F+AAQPALLY+VP  +       +  GE+     +DES+
Sbjct:  242 KIDFDRYDIIALLMCSPILISHLLKRHWITNNIIGVSFSILGIERLHLASFKAGSLLLVGLFFYDIFWVFGTDVMTSVAKGIDAPILLQFPQDIYRNGIMEASKHSMLGLGDIVIPGIFIALLRRFDYRVVQTTAESKAPQGSLKGRYYFVVTVVAYMAGLFITMAVMHHFKAAQPALLYLVPCCLFVPLLLAVIRGELSALWNYDESR 450          
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: YL8H_SCHPO (Probable intramembrane protease C25B8.17 OS=Schizosaccharomyces pombe GN=SPAC25B8.17 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.670e-31
Identity = 74/180 (41.11%), Postives = 103/180 (57.22%), Query Frame = 1
Query:  142 YFRSLEIEFTRSQIIAAIPGTFFCAWYASQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTRDTARPFSMLGLGDIVIPGIFVALALRFDV--------SRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVI 657
            + RS   + T  +I A +       +Y   KHW+A+N L  A     I ++ + S+ TGA+LL  LF YDI++VF T VMV+VA   D P K + P        SMLGLGDIV+PG+ +AL  RFD+           K S YF++ F+ Y +GL +T   + +F+AAQPALLY+ PA I
Sbjct:   80 FVRSFNPKTTFGKITATMSSIAIALFYFKTKHWMASNILAWALAANSISIMRIDSYNTGALLLGALFFYDIYFVFGTEVMVTVATGIDIPAKYVLPQFKNPTRLSMLGLGDIVMPGLMLALMYRFDLHYYINSTSQPKKHSTYFRNTFIAYGLGLGVTNFALYYFKAAQPALLYLSPACI 259          
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: YKK0_YEAST (Probable intramembrane protease YKL100C OS=Saccharomyces cerevisiae GN=YKL100C PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.112e-26
Identity = 70/202 (34.65%), Postives = 109/202 (53.96%), Query Frame = 1
Query:  217 WYASQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTR-DTAR---PFSMLGLGDIVIPGIFVALALRFDVSR---------------GKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWDGEVKQXLEFDESKTAACVSQERAMPK 765
            +Y S   WL +N + +   I  I  L L + K+GA++L  LF YDI +VF T VMV+VA + D P+KL  P + +TA+    FS+LGLGDI +PG+F+A+  ++D+ +                   +YF +A + Y   LV  ++ ++ F  AQPALLYIVP+++        W+ + KQ   F         S ++A+ K
Sbjct:  322 FYLSPNDWLISNAVSMNMAIWSIAQLKLKNLKSGALILIALFFYDICFVFGTDVMVTVATNLDIPVKLSLPVKFNTAQNNFNFSILGLGDIALPGMFIAMCYKYDIWKWHLDHDDTEFHFLNWSYVGKYFITAMVSYVASLVSAMVSLSIFNTAQPALLYIVPSLLISTILVACWNKDFKQFWNFQYDTIEVDKSLKKAIEK 523          
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: PSL1_MOUSE (Signal peptide peptidase-like 2B OS=Mus musculus GN=Sppl2b PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24
Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = 1
Query:  238 WLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTP--------VMVSVAKSFD-------APIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWDGEV 696
            W+  +TLG+AFC+  ++ + L +FK   +LL  LF+YDIF+VF TP        +MV VA            P+ L  P  +T+      RPFS+LG GDI++PG+ VA   RFD+       YF +  + Y +GL++T + +   Q  QPALLY+VP  +       +W  E+
Sbjct:  315 WVLQDTLGIAFCLYMLKTIRLPTFKACTLLLLVLFIYDIFFVFITPFLTKSGNSIMVEVATGPSNSSTHEKLPMVLKVPRLNTSPLSLCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRIYFVACTIAYGLGLLVTFVALVLMQRGQPALLYLVPCTLLTSCTVALWRREL 488          
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: PSL1_HUMAN (Signal peptide peptidase-like 2B OS=Homo sapiens GN=SPPL2B PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.674e-23
Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = 1
Query:  238 WLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTP--------VMVSVAKSFD-------APIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWDGEV 696
            W+  + LG+AFC+  ++ + L +FK   +LL  LF+YDIF+VF TP        +MV VA            P+ L  P  +++      RPFS+LG GDI++PG+ VA   RFD+       YF +  + Y VGL++T + +   Q  QPALLY+VP  +    A  +W  E+
Sbjct:  322 WVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGSSIMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRREL 495          
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: PSL1_RAT (Signal peptide peptidase-like 2B OS=Rattus norvegicus GN=Sppl2b PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.729e-23
Identity = 63/174 (36.21%), Postives = 93/174 (53.45%), Query Frame = 1
Query:  238 WLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTP--------VMVSVAKSFD-------APIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWDGEV 696
            W+  +TLG+AFC+  +  + L +FK   +LL  LFVYDIF+VF TP        +MV VA            P+ L  P  +T+      RPFS+LG GDI++PG+ VA   RFD+       YF +  + Y +GL++T + +   +  QPALLY+VP  +       +W  E+
Sbjct:  315 WVLQDTLGIAFCLYMLRTIRLPTFKACTLLLLVLFVYDIFFVFITPYLTKSGNSIMVEVATGPSNSSTHEKLPMVLKVPRLNTSPLSLCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRIYFVACTIAYGLGLLVTFVALVLMRHGQPALLYLVPCTLLTSCTVALWRREM 488          
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: PSL1_CHICK (Signal peptide peptidase-like 2B OS=Gallus gallus GN=SPPL2B PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.729e-23
Identity = 75/257 (29.18%), Postives = 122/257 (47.47%), Query Frame = 1
Query:   37 FFVLGIIALSATI------LPAVKRF------LPNHWNEDLIIWHFPYFRSLEIEFTRSQIIAAIPGTFFCAWYA----SQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSF---------------DAPIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWDGEV 696
            + ++GI  L+A+I       P V+RF      +P++        + PYF        R  ++A    +    W       Q  W+  + LG+AFC+  ++ + L +FK   +LL  LFVYD+F+VF TP +    +S                  P+ L  P  +++      RPFS+LG GDI++PG+ VA   RFD+       YF +  + Y +GL++T + +   Q  QPALLY+VP  +    +  +W  E+
Sbjct:  245 YVIIGIFCLAASIGLYSCLSPFVRRFPLGKCRIPDN--------NLPYFHKRPQ--VRILLLAVFCISVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPFLTKTGESIMVEVAAGPSDSATHEKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGIGLLVTFVALALMQMGQPALLYLVPCTLITSFSVALWRKEL 491          
BLAST of EY757765 vs. ExPASy Swiss-Prot
Match: PSL2_HUMAN (Signal peptide peptidase-like 2A OS=Homo sapiens GN=SPPL2A PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.384e-22
Identity = 57/160 (35.62%), Postives = 86/160 (53.75%), Query Frame = 1
Query:  238 WLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTP--------VMVSVAKS-----------FDAPIKLLFPTRDTA-RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVI 657
            W+  + LG+AFC+  I+ L L +FK+  ILL  L +YD+F+VF TP        +MV +A                P  + F        P S+LG GDI++PG+ +A   RFDV  G    Y+ S+ + Y +G++LT +V+   +  QPALLY+VP  +
Sbjct:  314 WILQDILGIAFCLNLIKTLKLPNFKSCVILLGLLLLYDVFFVFITPFITKNGESIMVELAAGPFGNNEKLPVVIRVPKLIYFSVMSVCLMPVSILGFGDIIVPGLLIAYCRRFDVQTGSSYIYYVSSTVAYAIGMILTFVVLVLMKKGQPALLYLVPCTL 473          
The following BLAST results are available for this feature:
BLAST of EY757765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
HM13_MOUSE2.828e-5546.35Minor histocompatibility antigen H13 OS=Mus muscul... [more]
HM13_HUMAN3.694e-5546.95Minor histocompatibility antigen H13 OS=Homo sapie... [more]
IMP2_CAEEL1.842e-3845.45Intramembrane protease 2 OS=Caenorhabditis elegans... [more]
YL8H_SCHPO1.670e-3141.11Probable intramembrane protease C25B8.17 OS=Schizo... [more]
YKK0_YEAST2.112e-2634.65Probable intramembrane protease YKL100C OS=Sacchar... [more]
PSL1_MOUSE9.812e-2436.21Signal peptide peptidase-like 2B OS=Mus musculus G... [more]
PSL1_HUMAN1.674e-2336.21Signal peptide peptidase-like 2B OS=Homo sapiens G... [more]
PSL1_RAT3.729e-2336.21Signal peptide peptidase-like 2B OS=Rattus norvegi... [more]
PSL1_CHICK3.729e-2329.18Signal peptide peptidase-like 2B OS=Gallus gallus ... [more]
PSL2_HUMAN5.384e-2235.63Signal peptide peptidase-like 2A OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-027-C04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757765 ID=EY757765; Name=EY757765; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGGGTCAACGCTGTATTGACCTGCTACTTTTTCGTTCTTGG
GATCATTGCCCTTTCGGCAACTATCTTACCAGCTGTGAAACGCTTCTTGC
CAAACCATTGGAATGAGGACCTAATTATATGGCATTTCCCTTATTTCCGT
TCTTTGGAGATTGAGTTCACAAGGTCTCAGATCATTGCTGCAATCCCTGG
GACGTTTTTTTGTGCATGGTATGCTTCACAGAAACATTGGCTAGCTAACA
ATACCTTGGGCCTTGCCTTCTGCATTCAGGGAATTGAAATGCTTTCTCTT
GGATCTTTCAAGACTGGTGCCATTCTTTTGGCTGGACTTTTTGTATATGA
TATTTTCTGGGTTTTCTTCACTCCAGTAATGGTTAGTGTTGCAAAATCTT
TTGACGCTCCTATCAAGCTTTTGTTCCCAACGAGAGACACTGCCCGACCA
TTTTCCATGCTTGGACTTGGCGACATTGTAATTCCTGGTATCTTTGTGGC
ACTAGCATTGCGATTTGATGTGTCCAGAGGGAAAGGAAGCCGGTACTTCA
AGAGCGCTTTTCTGGGATATACAGTTGGTTTAGTCCTAACAATCATTGTC
ATGAACTGGTTTCAAGCTGCACAGCCTGCACTTTTGTATATTGTGCCTGC
TGTAATTGGATTCTTGGCCGCTCACTGCATATGGGACGGNGAAGTCAAAC
AGNTGTTGGAGTTTGATGAGTCTAAGACTGCCGCGTGTGTGTCACAAGAA
AGAGCGATGCCAAAACTAGCAAGAAGGCGAATAATTTAAAATGCCATCTA
CAATGAACCATTTTACCAAGAAATACTTTTATTTCTCCTTTTGGAGATCA
AGCTGGGCAAGCTCATCCAAGCTACTTATGCACCCTG
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