EY757759

Overview
NameEY757759
Unique NameEY757759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757759 vs. ExPASy Swiss-Prot
Match: Y38K_CORSE (Uncharacterized 38.1 kDa protein OS=Corydalis sempervirens PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.071e-53
Identity = 92/129 (71.32%), Postives = 115/129 (89.15%), Query Frame = 3
Query:   30 RVINLPNNEEVLARKYRIRLRGIDAPESSMPYGKEAQNELIKIVQGKCLRVLVYGDDRYGRCVADLYCNGIFVQEVMLKKGCAWHYSAYDQRSELAKWEKEARAKRVGLWAASNPEEPWEWRKDRREGR 416
            RV++ PNNE++LARKYRIRLRGID+PESSMP+GKEA+ ELIK+V GKCL V +Y +DRYGR V D+YCNG F+QE MLKKG AWHY+AYD+R +L+KWE++ARA RVGLWA+SNPE+PWEWRK++R G+
Sbjct:  210 RVLSGPNNEDILARKYRIRLRGIDSPESSMPFGKEAKEELIKLVVGKCLTVHIYEEDRYGRSVGDIYCNGQFIQEKMLKKGLAWHYTAYDKRPQLSKWEEKARAARVGLWASSNPEKPWEWRKNKRNGK 338          
BLAST of EY757759 vs. ExPASy Swiss-Prot
Match: YFI3_ECOLX (Uncharacterized endonuclease OS=Escherichia coli PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = 3
Query:   27 LRVINLPNNEEVLARK-YRIRLRGIDAPESSMPYGKEAQNELIKIVQGKCLRVLVYGDDRYGRCVADLYC-NGIFVQEVMLKKGCAWHYSAYDQRSELAKWEKEARAKRVGLWAASNPEEPWEWR 395
            +RV++    E + +RK  RIRL  IDAPE    YG+ + + +  +V GK + V  +  DRYGR +  +Y  +G+ V + M++ G AW Y  Y+    L   + EAR ++ GLW+ ++P  PW WR
Sbjct:   26 VRVLDGDTIEVMDSRKAVRIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNVNQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWR 150          
BLAST of EY757759 vs. ExPASy Swiss-Prot
Match: YFI3_ECO57 (Uncharacterized endonuclease OS=Escherichia coli O157:H7 GN=L7003 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = 3
Query:   27 LRVINLPNNEEVLARK-YRIRLRGIDAPESSMPYGKEAQNELIKIVQGKCLRVLVYGDDRYGRCVADLYC-NGIFVQEVMLKKGCAWHYSAYDQRSELAKWEKEARAKRVGLWAASNPEEPWEWR 395
            +RV++    E + +RK  RIRL  IDAPE    YG+ + + +  +V GK + V  +  DRYGR +  +Y  +G+ V + M++ G AW Y  Y+    L   + EAR ++ GLW+ ++P  PW WR
Sbjct:   26 VRVLDGDTIEVMDSRKAVRIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRMLGQVYAPDGMNVNQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWR 150          
BLAST of EY757759 vs. ExPASy Swiss-Prot
Match: Y1296_HAEIN (Uncharacterized endonuclease HI1296 OS=Haemophilus influenzae GN=HI1296 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 3
Query:   69 RKYRIRLRGIDAPESSMPYGKEAQNELIKIVQGKCLRVLVYGDDRYGRCVADLYCNGIFVQEVMLKKGCAWHYSAYDQRSELAKWEKEARAKRVGLWAASNPEEPWEWRKDRR 407
            +  ++RL  IDAPE S  +G++++  L  +V  K +R+   G DRY R +A +Y     +   M+K+G AW Y  Y       + ++ A+AK +GLWA +NP EP +WR+  +
Sbjct:   47 KSIKVRLAEIDAPEKSQAFGQKSKKTLSDLVYQKNVRLARKGKDRYQRTLAVVYYQKQNINLEMVKQGMAWAYKQYSHDPIYLQAQENAQAKGIGLWADNNPIEPSQWRRQEK 159          
BLAST of EY757759 vs. ExPASy Swiss-Prot
Match: NUC_SHIFL (Micrococcal nuclease OS=Shigella flexneri GN=nuc PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 40/118 (33.90%), Postives = 67/118 (56.78%), Query Frame = 3
Query:   78 RIRLRGIDAPESSMPYGKEAQNELIKIVQGKCLRVLVYGDDRYGRCVADLYCNGIF---------VQEVMLKKGCAWHYSAYDQRSE--LAKWEKEARAKRVGLWAASNPEEPWEWRK 398
            R+RL  IDAPES   +G  A+  L  +   + ++V     DRYGR +  +Y    +         +  +M+++G AW Y  Y + ++  + ++EKEAR +R+GLW+  N +EPW+WR+
Sbjct:   50 RVRLADIDAPESGQAFGSRARQRLADLTFRQEVQVTEKEVDRYGRTLGVVYAPLQYPGGQTQLTNINAIMVQEGMAWAYRYYGKPTDAQMYEYEKEARRQRLGLWSDPNAQEPWKWRR 167          
BLAST of EY757759 vs. ExPASy Swiss-Prot
Match: PARB4_ECOLX (Protein parB OS=Escherichia coli GN=parB PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = 3
Query:   78 RIRLRGIDAPESSMPYGKEAQNELIKIVQGKCLRVLVYGDDRYGRCVADLYCNGIF---------VQEVMLKKGCAWHYSAYDQRS--ELAKWEKEARAKRVGLWAASNPEEPWEWRKDRREGR 416
            R+RL  IDAPE    +G+ A+  L  +V  + + V     DRYGR +  ++ N            V   M+ +G AW Y  + + +  E+ + E+EAR KRVGLW+  +  EPW+WR++    R
Sbjct:  155 RVRLVDIDAPEKRQAFGERARQALAGMVFRRHVLVDEKDTDRYGRTLGTVWVNMELASRPPQPRNVNAAMVHQGMAWAYRFHGRAADPEMLRLEQEARGKRVGLWSDPHAVEPWKWRRESNNRR 278          
The following BLAST results are available for this feature:
BLAST of EY757759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
Y38K_CORSE1.071e-5371.32Uncharacterized 38.1 kDa protein OS=Corydalis semp... [more]
YFI3_ECOLX5.198e-1636.80Uncharacterized endonuclease OS=Escherichia coli P... [more]
YFI3_ECO575.198e-1636.80Uncharacterized endonuclease OS=Escherichia coli O... [more]
Y1296_HAEIN5.747e-1535.40Uncharacterized endonuclease HI1296 OS=Haemophilus... [more]
NUC_SHIFL8.298e-1433.90Micrococcal nuclease OS=Shigella flexneri GN=nuc P... [more]
PARB4_ECOLX2.044e-1233.87Protein parB OS=Escherichia coli GN=parB PE=4 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-027-B10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757759 ID=EY757759; Name=EY757759; organism=Citrus sinensis; type=EST; length=707bp
CCACGCGTCCGTGATCATCTTCTGATCTCAGGGTGATAAATCTTCCAAAC
AACGAGGAAGTTCTAGCACGAAAGTATCGAATTCGACTAAGAGGCATAGA
TGCACCAGAGAGTTCAATGCCATATGGGAAAGAAGCACAGAATGAACTGA
TTAAGATTGTTCAAGGAAAGTGTTTGAGAGTCCTAGTCTATGGTGATGAT
CGTTATGGTCGCTGTGTAGCAGATTTGTATTGCAATGGCATATTTGTACA
GGAAGTGATGCTCAAGAAAGGGTGTGCATGGCATTACTCTGCCTATGACC
AACGCTCAGAACTTGCAAAATGGGAAAAAGAGGCTCGAGCAAAGAGAGTT
GGGTTATGGGCAGCATCAAACCCAGAAGAGCCATGGGAATGGAGAAAGGA
CAGGCGCGAAGGCCGATAGCATTGCCCTTCCAAGGAGACAAATGTAAATT
CCTTGTCTGCCTCATATTGTCTGGACAACCATAAGCCTGTCAGTTTTCAC
GTTTAGGACCTGGAGTTGCTGCAGAAGAGAAACACAGCAACACTGAAAAT
AAAGATCAGTCCACAGTTTGTGTCCTATCTAATTCGGAGCTACCATTGCT
GGGTATCTAATTTATCATTGCAACAGTGACCGGTCTTCATTGTACTAAAA
TTCCATATTAATGTAACACGCAATTTTCAGCAAAAAAAAAAAAAAAAAAN
NAAAAAN
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