EY757753

Overview
NameEY757753
Unique NameEY757753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length537
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7383 contig Csv1_Contig7383:241..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY757753 vs. ExPASy Swiss-Prot
Match: SYD_ARCB4 (Aspartyl-tRNA synthetase OS=Arcobacter butzleri (strain RM4018) GN=aspS PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.950e-12
Identity = 32/48 (66.67%), Postives = 43/48 (89.58%), Query Frame = 3 
Query:   12 RLVMLLAGTNSIRDVIAFPKTTTAQCVLTRSPSEVDPQQLQELSLQTK 155
            R++MLLAGT+SIRDVIAFPKT  AQC+LT++PS VD +QL+ELS++ +
Sbjct:  536 RMIMLLAGTDSIRDVIAFPKTQKAQCLLTQAPSAVDEEQLKELSIRIR 583
[Close]
BLAST of EY757753 vs. ExPASy Swiss-Prot
Match: SYD_SULNB (Aspartyl-tRNA synthetase OS=Sulfurovum sp. (strain NBC37-1) GN=aspS PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.449e-11
Identity = 29/48 (60.42%), Postives = 42/48 (87.50%), Query Frame = 3 
Query:   12 RLVMLLAGTNSIRDVIAFPKTTTAQCVLTRSPSEVDPQQLQELSLQTK 155
            R++M++ G +SIRDVIAFPKT  AQC+LT++PSEVD +QL+ELS++ +
Sbjct:  531 RMIMIMTGASSIRDVIAFPKTQKAQCLLTQAPSEVDNEQLKELSIRVR 578
The following BLAST results are available for this feature:
BLAST of EY757753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SYD_ARCB49.950e-1266.67Aspartyl-tRNA synthetase OS=Arcobacter butzleri (s... [more]
SYD_SULNB6.449e-1160.42Aspartyl-tRNA synthetase OS=Sulfurovum sp. (strain... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-027-B03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757753 ID=EY757753; Name=EY757753; organism=Citrus sinensis; type=EST; length=537bp
CCACGCGTCCGAGGCTGGTTATGTTGTTGGCAGGCACGAATTCCATCAGG
GATGTTATCGCCTTCCCAAAGACAACAACCGCTCAGTGTGTCCTCACAAG
GTCTCCATCAGAGGTGGATCCCCAGCAGCTACAAGAACTATCATTACAGA
CCAAATAGTTTCACGTCAGTGGTATGCCAAACATCGACTTTAGCCGGACC
AGTGTTCACTGTCCTGAATATGTTTGAGATAATTGAGCTGTTTTTACATG
CACTAGGTTCTACTTTTAGGTGAGGGTATTAATAGTATGTTTGTGAACAA
AAACAGGCCGTGTATGTTAGTGTTCTATATTCGTTTACCCTGAGTAATTA
AATTATAATTCATAAGTGAACGTTGTGCCCATGTAACCAGCATTGGCCAT
TATGAATGCACCTCAGTGAATTGAAAACTTTTATCTTGGACTAGGTCATT
GAATTTGTTAAAATTTGAGAGTGCTTGTAAATTATATAAGGGATATTATT
ATTTTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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