EY757736

Overview
NameEY757736
Unique NameEY757736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length463
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY757736 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.623e-13
Identity = 32/50 (64.00%), Postives = 32/50 (64.00%), Query Frame = 2 
Query:    8 SATSYKKPXXXXXXXXXXXXXXVPPGTYGNKQVCPCYNNWKTKEGGPKCP 157
            S TSYKKP              VP GTYGNKQ CPCYNNWKTK GGPKCP
Sbjct:   63 SKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
[Close]
BLAST of EY757736 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.924e-12
Identity = 30/50 (60.00%), Postives = 32/50 (64.00%), Query Frame = 2 
Query:    8 SATSYKKPXXXXXXXXXXXXXXVPPGTYGNKQVCPCYNNWKTKEGGPKCP 157
            SATS+KKP              VP G YGNKQ CPCYNNWKT+EG PKCP
Sbjct:   47 SATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
[Close]
BLAST of EY757736 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 9.867e-11
Identity = 28/48 (58.33%), Postives = 29/48 (60.42%), Query Frame = 2 
Query:   14 TSYKKPXXXXXXXXXXXXXXVPPGTYGNKQVCPCYNNWKTKEGGPKCP 157
            T Y K               VPPG YGNKQVC CYNNWKT+EGGPKCP
Sbjct:   59 TQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
The following BLAST results are available for this feature:
BLAST of EY757736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
GAST1_SOLLC3.623e-1364.00Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=... [more]
RSI1_SOLLC8.924e-1260.00Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=... [more]
GASA4_ARATH9.867e-1158.33Gibberellin-regulated protein 4 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-026-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757736 ID=EY757736; Name=EY757736; organism=Citrus sinensis; type=EST; length=463bp
CCACGCGTCCGCGACGTCGTACAAGAAGCCATGCATGTTCTTTTGCTTAA
AGTGCTGCTCAAAATGCCTGTGCGTGCCTCCTGGAACTTACGGAAACAAG
CAAGTTTGCCCTTGTTACAATAACTGGAAGACCAAGGAGGGAGGACCCAA
ATGCCCGTAATTGAGAATTTTTTTTTTTTTTTATCAAATCAATTTTATGT
CACTAATAAATAGGGCAATTCAAAATCAAGAGACTTAAGAATGTTTGTTT
TCTCTTTAGAAAAATCTGCGGCTTGGGTCCCTCGTGCTTAAGATTTTATT
CTACTTTGATTTGATGTCAATTAGATGCCTTCTTAAGAAGGGTTACTTTG
ATCATATGATGTAATCTTTTTTATCTGAATTTCTTCCTAAAAAGATCATA
TGCTTGATTATGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA
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