EY757706

Overview
NameEY757706
Unique NameEY757706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD42_ORYSJ (Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 9.250e-33
Identity = 82/193 (42.49%), Postives = 115/193 (59.59%), Query Frame = 2
Query:   26 FRPETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATDHS--VDEQNLGCFHKRLNKDMVRRCYNLIRKNRSQLLHINSVQ 598
            F   TAYL+VNYLDRFL  + +  G+ W   LLSVACL++AAKMEET VP  LDLQ+ EP  RFLF+ +T+HRMELLV+++L WR+  VTPF ++ YF+ K++  N       S    ++ LI+       FL   PS IAAAV       +  V E+++      ++K  V +C   I+ +   +  IN+VQ
Sbjct:  126 FSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEP--RFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAP---RSWLLRSSELILRIAAGTGFLEFRPSEIAAAVAATVAGEATGVVEEDIAEAFTHVDKGRVLQCQEAIQDHHYSMATINTVQ 313          
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 2.061e-32
Identity = 86/211 (40.76%), Postives = 123/211 (58.29%), Query Frame = 2
Query:   26 FRPETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATDHSVDEQNLGCFHKR-------LNKDMVRRCYNLIRKNRSQLLHINSVQKPEHVAVNDKLRV 637
            F+P TAYL+VNY+DRFL +  +    GW   LL+VACL++AAKMEE  VP+L D Q+     ++LF+ KT+ RMELLV+S L WRL +VTPFDF+ +F  KI   +P     G   SHA  +I+S      FL   PS+IAAA +L   +      ++   H+        L+K+ + RCY L+   ++  +  N +  P+ +A   KLRV
Sbjct:   98 FQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQV--AGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKI---DPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLM---KAMAIENNRLNTPKVIA---KLRV 297          
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD42_ARATH (Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.519e-30
Identity = 80/203 (39.41%), Postives = 119/203 (58.62%), Query Frame = 2
Query:   26 FRPETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATDHSVDEQNLGCFHKRLNKDMVRRCYNLIRKNRSQLLHINSVQKPEHVAVNDKLR 634
            F P    L++NYLDRFL  H +  GK W   LL+VACL++AAK+EET+VP L+ LQ+  P   F+F+ K+V RMELLV++ L+WRL  VTP  +V YF+SKI+ ++  ++    + + +  +I ST   IDFL    S IAAAV L  +    D+ +       L K+ V++   +I ++ S     +S Q P +  +  K R
Sbjct:   85 FGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAP--MFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYD--QEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVALSVSGEHFDKFSFSSSFSSLEKERVKKIGEMIERDGSS----SSSQTPNNTVLQFKSR 279          
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD41_ARATH (Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.519e-30
Identity = 77/188 (40.96%), Postives = 112/188 (59.57%), Query Frame = 2
Query:   26 FRPETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATDH----SVDEQNLGCFHKRLNKDMVRRCYNLIRKNRSQL 577
            F P    L++NYLDRFL  H +  GKGW   LL+VACL++AAK+EET VP L+DLQ+ +P  +F+F+ K+V RMELLV++ LKWRL  +TP  ++ YF+ K+S     ++   ++ S +  +I ST   IDFL   PS +AAAV L  +        D  +       L K+ V++   +I  + S L
Sbjct:   94 FGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDP--QFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMS--KCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMIESDGSDL 277          
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 7.329e-30
Identity = 82/190 (43.16%), Postives = 116/190 (61.05%), Query Frame = 2
Query:   14 SHVPFRPETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATDHSVDEQNLGCFHKRLNKDMVRRCYNLIRKNRSQLLH 583
            S+  F P TA L+VNYLDRFL  + +  GK W   LL+VACL++AAKMEET VP  LDLQ+ E   R++F+ KT+ RMELLV+S+LKWR+  VTPF +V YF+ +++  +P   G  ++ S    L I+  T  + L   PS IAAAV        V E++    H  +NK+ +  C  +I+    +L+H
Sbjct:  115 SYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGE--ERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPP-SGRSALLSSELILCIARGT--ECLGFRPSEIAAAVAAAV----VGEEHAAFSH--VNKERMSHCQEVIQ--AMELIH 291          
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.572e-30
Identity = 79/184 (42.93%), Postives = 111/184 (60.33%), Query Frame = 2
Query:   14 SHVPFRPETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATDHS---VDEQNLGCFHKRLNKDMVRRCYNLI 556
            S+  F P + YL+VNYLDRFL S ++   + W   LLSV+CL++A KMEET VP  +DLQ+ +  + ++F+ + + RMEL+VM +LKWRL  VTPF F+ YF+ K   FN  +    ++ S  + L + T     FL+  PS IAAAVVL     +   V    LG     +NK+MV RCY L+
Sbjct:  107 SYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFD--AEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDK---FNEGKPPSYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVVLAVLAENQFLVFNSALGESEIPVNKEMVMRCYELM 285          
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD12_ORYSJ (Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.572e-30
Identity = 79/194 (40.72%), Postives = 120/194 (61.86%), Query Frame = 2
Query:   32 PETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATDH-----SVDEQNLGCFH-KRLNKDMVRRCYNLIRKNRSQLLHINSV 595
            P TAYL+V+Y+DRFL  H + PG GW   LL+V CL++AAKMEET VP++LDLQ+    +R++F+ +T+ RMELLV+ +L WRL ++TPF F++ F  K+   +P       +   A  + ++T    +FL   PS+IAAA VL A+       S+D   L  +    L+++ + RCY L++    QL+  N+V
Sbjct:  134 PVTAYLAVSYMDRFLSLHRL-PGNGWAMQLLAVTCLSLAAKMEETLVPSILDLQM--EDARYIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKV---DPNGKHIRELIHQATQVTLATIHDTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSWRIIGLDEEAIIRCYRLMQ----QLISSNNV 317          
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.633e-29
Identity = 74/186 (39.78%), Postives = 114/186 (61.29%), Query Frame = 2
Query:   14 SHVPFRPETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAA----VVLWATDHSVDEQNLGCFHKRLNKDMVRRCYNLIR 559
            +H  F      LS+NYLDRFL S+ +   K W   LL+V+CL++A+KMEET VP+++DLQ+ +P  +F+F+ KT+ RMELLV+++L WRL  +TPF F+ YF+ KIS    +     ++   ++  I++T   I+FL   PS IAAA    V +      +DE+        + ++ V+RC NL+R
Sbjct:  109 AHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDP--KFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGHVSE-----NLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIYVKQERVKRCLNLMR 287          
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD11_ORYSJ (Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.204e-29
Identity = 77/190 (40.53%), Postives = 115/190 (60.53%), Query Frame = 2
Query:   26 FRPETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGS--VFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATDH---------SVDEQNLGCFHKRLNKDMVRRCYNLIRK 562
            F+P TAYL+V+Y+DRF+ S S+ P  GW   LL VACL++AAKMEE+S P LLDLQ+    +RF+F+P+T+ RMEL+V+  L WRL +VTPF FV +F  K+        G  S  +   A  +I+S    ++FL    S++AAA VL+A +          SV  ++   +   L ++ +  CY L+++
Sbjct:  141 FQPATAYLAVSYMDRFMSSRSL-PDHGWASQLLCVACLSLAAKMEESSAPPLLDLQI--EGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVG-----SSGRSSRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNESPAAMSHRSSVSSESAASWCIGLTEERISSCYQLLQR 322          
BLAST of EY757706 vs. ExPASy Swiss-Prot
Match: CCD31_ORYSJ (Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.079e-28
Identity = 78/181 (43.09%), Postives = 111/181 (61.33%), Query Frame = 2
Query:   26 FRPETAYLSVNYLDRFLLSHSMKPGKGWQWHLLSVACLAVAAKMEETSVPNLLDLQLIEPSSRFLFKPKTVHRMELLVMSSLKWRLCTVTPFDFVHYFISKISCFNPQRDGFGSVFSHAAALIISTRTVIDFLACPPSTIAAAVVLWATDH---SVDEQNLGCFHKRLNKDMVRRCYNLIR 559
            F P TA LSVNYLDRFL    +   +     LL+VA L++AAKMEET VP+ LDLQ+ +  ++++F+ +T+ RMEL V+++LKWR+  VT   F+ Y++ K   FN       S  S +  LI+ST  V +FL   PS IAA+V L A +    S+ E+   C+ K L K+ V RCY +I+
Sbjct:  106 FGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCD--AKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHK---FNDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHETSMFERVATCY-KNLKKERVLRCYEMIQ 280          
The following BLAST results are available for this feature:
BLAST of EY757706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
CCD42_ORYSJ9.250e-3342.49Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD11_ARATH2.061e-3240.76Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=... [more]
CCD42_ARATH2.519e-3039.41Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=... [more]
CCD41_ARATH2.519e-3040.96Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=... [more]
CCD41_ORYSJ7.329e-3043.16Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD22_ORYSJ9.572e-3042.93Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD12_ORYSJ9.572e-3040.72Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD21_ARATH1.633e-2939.78Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=... [more]
CCD11_ORYSJ6.204e-2940.53Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD31_ORYSJ3.079e-2843.09Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-026-E11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757706 ID=EY757706; Name=EY757706; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGATTCTCACGTCCCATTTCGGCCTGAAACGGCTTATCTTT
CCGTGAACTACTTGGATCGTTTCCTGTTGTCCCATAGTATGAAGCCAGGG
AAAGGATGGCAATGGCACTTGTTATCGGTTGCATGCCTGGCCGTAGCAGC
TAAAATGGAGGAAACAAGCGTCCCTAATCTCTTAGACCTTCAATTAATAG
AGCCCAGTAGTAGATTTTTGTTCAAGCCCAAAACAGTTCACCGCATGGAG
CTTCTGGTAATGTCCAGTCTCAAGTGGCGATTGTGCACCGTAACCCCCTT
CGATTTTGTACATTATTTCATCTCTAAAATCTCATGCTTCAATCCCCAAC
GTGATGGGTTTGGCTCTGTTTTTTCACACGCAGCCGCCCTCATTATTAGC
ACAAGGACAGTGATCGATTTCTTGGCTTGCCCTCCATCCACAATAGCAGC
AGCTGTGGTGCTTTGGGCTACTGATCACAGTGTTGATGAACAAAATTTAG
GCTGCTTTCACAAAAGATTGAATAAAGATATGGTTAGAAGATGCTACAAT
CTTATAAGGAAGAACAGGTCCCAATTGCTGCACATTAACTCTGTCCAAAA
ACCAGAGCATGTAGCAGTAAATGATAAGCTTAGGGTGGTTTTCGGGGGAA
GCTGTGATGACTAAGAACAGATAAAAGGACACATAATCAAGCCAGGACTT
GCTTTCTAGCAAGCGTTGGGATCTGGAAATGCTAGATAAGCCAAAAAANT
TGATCAGTTTGTTTTTGGGTTTTATTCTTTCCCCCAGAAAGTTTCGATTT
GTAAGACATGATTTATTTTAATTTTATTTTTTTCCCGGGGTTGATGGTTT
TTCATATGATATGATGATTCTGATGAAGTCTAAAAAAAAAAAAAAAAGGC
NGCCGCTCTAGA
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