EY757662

Overview
NameEY757662
Unique NameEY757662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9875 contig Csv1_Contig9875:1736..2306. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY757662 vs. ExPASy Swiss-Prot
Match: DRTS_MAIZE (Bifunctional dihydrofolate reductase-thymidylate synthase OS=Zea mays GN=DRTS PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:   70 KAFSILKINPEKKDIDSSVSEDFKLIGYDPHQKIEMKMAV 189
            K F ILKINP KKDIDS ++ DFKL+GYDPHQKIEMKMAV
Sbjct:  482 KPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521
[Close]
BLAST of EY757662 vs. ExPASy Swiss-Prot
Match: DRTS2_ARATH (Bifunctional dihydrofolate reductase-thymidylate synthase 2 OS=Arabidopsis thaliana GN=THY-2 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 1 
Query:   70 KAFSILKINPEKKDIDSSVSEDFKLIGYDPHQKIEMKMAV 189
            K F +LKINPEKKDIDS V++DF+LIGYDPH+KI+MKMAV
Sbjct:  526 KPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 565
The following BLAST results are available for this feature:
BLAST of EY757662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DRTS_MAIZE1.149e-1180.00Bifunctional dihydrofolate reductase-thymidylate s... [more]
DRTS2_ARATH1.500e-1177.50Bifunctional dihydrofolate reductase-thymidylate s... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-026-A11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757662 ID=EY757662; Name=EY757662; organism=Citrus sinensis; type=EST; length=571bp
CACTGGTACATCTTATTAAACCGGNCCGGATTCCTGCGTCGACCCCGCGT
CCGCAACTTCAGTTACGCCAAAGCCTTTTCCATTTTGAAGATCAATCCTG
AGAAGAAAGATATAGATTCTTCCGTATCAGAGGATTTCAAACTTATAGGT
TATGATCCACACCAGAAAATAGAAATGAAAATGGCGGTATAGATCTCTCT
TATAGGTTCAGTAACTCACAGACTCTGGTCCCTCCTAGGCAATAATTGCC
AAGTTTTGAGGCACCGCTACTGGAGGCATGTATTGACGCAGAGTTTTATA
CAAATAGCCAATAAGAATCTGATTGTTGGATAAACTTTTAAATAGTGCAT
ATGTAGTAAGCGGGAATCCTTTAGTCCACAAGAGTTGGTGGTTCTAAGGT
GATTTAGGATGTTTGTATTTTCTTGCTTTTCAACTTTCATTTTCCCTTGT
TACATGAAAACTATCACAGTATGTACTTCTGCTCAAAGTCTCGAATGCTC
TATTTGAAAGAGATTTGGAAACTTGGATTTATTTCGTTTTNNNNNANNNN
NAANNAAAAAAAAAAAAAAAA
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