EY757646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: U5S1_CHICK (116 kDa U5 small nuclear ribonucleoprotein component OS=Gallus gallus GN=EFTUD2 PE=2 SV=1) HSP 1 Score: 385.956 bits (990), Expect = 1.055e-106 Identity = 184/227 (81.06%), Postives = 200/227 (88.11%), Query Frame = 1 Query: 13 PLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIV 693 PL GLAEDIEN VV I W+RK LG+FF+TKYDWDLLAARSIWAFGPD GPNIL+DDTLP+EVDK+LL +VKDSIVQGFQWG REGPLCDE IRNVKFKI+DA IA EPLHRG GQIIPTARRV YSAFLMATPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D P PG+P Y +KAF+P I+SFGFETDLR HTQGQAFSLSVF HW IVPGDPLDKSIV Sbjct: 691 PLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIV 917
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: U5S1_PONAB (116 kDa U5 small nuclear ribonucleoprotein component OS=Pongo abelii GN=EFTUD2 PE=2 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.378e-106 Identity = 183/227 (80.62%), Postives = 200/227 (88.11%), Query Frame = 1 Query: 13 PLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIV 693 PL GLAEDIEN VV I W+RK LG+FF+TKYDWDLLAARSIWAFGPD GPNIL+DDTLP+EVDK+LL +VKDSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YSAFLMATPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D P PG+P Y +KAF+P I+SFGFETDLR HTQGQAFSLSVF HW IVPGDPLDKSIV Sbjct: 691 PLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIV 917
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: U5S1_MOUSE (116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus GN=Eftud2 PE=2 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.378e-106 Identity = 183/227 (80.62%), Postives = 200/227 (88.11%), Query Frame = 1 Query: 13 PLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIV 693 PL GLAEDIEN VV I W+RK LG+FF+TKYDWDLLAARSIWAFGPD GPNIL+DDTLP+EVDK+LL +VKDSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YSAFLMATPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D P PG+P Y +KAF+P I+SFGFETDLR HTQGQAFSLSVF HW IVPGDPLDKSIV Sbjct: 690 PLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIV 916
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: U5S1_HUMAN (116 kDa U5 small nuclear ribonucleoprotein component OS=Homo sapiens GN=EFTUD2 PE=1 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.378e-106 Identity = 183/227 (80.62%), Postives = 200/227 (88.11%), Query Frame = 1 Query: 13 PLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIV 693 PL GLAEDIEN VV I W+RK LG+FF+TKYDWDLLAARSIWAFGPD GPNIL+DDTLP+EVDK+LL +VKDSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YSAFLMATPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D P PG+P Y +KAF+P I+SFGFETDLR HTQGQAFSLSVF HW IVPGDPLDKSIV Sbjct: 691 PLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIV 917
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: U5S1_BOVIN (116 kDa U5 small nuclear ribonucleoprotein component OS=Bos taurus GN=EFTUD2 PE=2 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.378e-106 Identity = 183/227 (80.62%), Postives = 200/227 (88.11%), Query Frame = 1 Query: 13 PLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIV 693 PL GLAEDIEN VV I W+RK LG+FF+TKYDWDLLAARSIWAFGPD GPNIL+DDTLP+EVDK+LL +VKDSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YSAFLMATPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D P PG+P Y +KAF+P I+SFGFETDLR HTQGQAFSLSVF HW IVPGDPLDKSIV Sbjct: 691 PLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIV 917
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: SN114_SCHPO (114 kDa U5 small nuclear ribonucleoprotein component homolog OS=Schizosaccharomyces pombe GN=cwf10 PE=1 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 9.920e-89 Identity = 149/228 (65.35%), Postives = 184/228 (80.70%), Query Frame = 1 Query: 7 VRPLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSI 690 V PL G++ DIENG V+I+W +K + +FF+ YDWDLLA+RSIWAFGPD +G NIL DDTL T+VDK++LN+VK+ I QGFQWG REGPLCDE IRNV F+++D +APE ++RG GQIIPTARRV YS+FL A+PRLMEPVY VE+ P D + IY +L+RRRGHV D+P+PG+P Y+V+A +PVI+S GFETDLR HTQGQA VFDHW +VPGDPLDKSI Sbjct: 702 VEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDETIRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDSCGFETDLRVHTQGQAMCQMVFDHWQVVPGDPLDKSI 929
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4) HSP 1 Score: 245.358 bits (625), Expect = 2.225e-64 Identity = 121/228 (53.07%), Postives = 148/228 (64.91%), Query Frame = 1 Query: 4 RVRPLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 687 + RP GLAEDI+ G VS K + KY+WD+ AR IW FGPD GPNIL D T + LN +KDS+V GFQW +EG LC+E +R V+F + D + + +HRG GQIIPTARR Y++ L A PRLMEP+Y VEIQ P V IY VL+R+RGHV + GTP ++VKA+LPV ESFGF DLR +T GQAF VFDHW I+PGDP D S Sbjct: 605 KARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQY----LNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNS 828
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 2.225e-64 Identity = 121/228 (53.07%), Postives = 148/228 (64.91%), Query Frame = 1 Query: 4 RVRPLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 687 + RP GLAEDI+ G VS K + KY+WD+ AR IW FGPD GPNIL D T + LN +KDS+V GFQW +EG LC+E +R V+F + D + + +HRG GQIIPTARR Y++ L A PRLMEP+Y VEIQ P V IY VL+R+RGHV + GTP ++VKA+LPV ESFGF DLR +T GQAF VFDHW I+PGDP D S Sbjct: 605 KARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQY----LNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNS 828
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3) HSP 1 Score: 245.358 bits (625), Expect = 2.225e-64 Identity = 121/228 (53.07%), Postives = 148/228 (64.91%), Query Frame = 1 Query: 4 RVRPLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 687 + RP GLAEDI+ G VS K + KY+WD+ AR IW FGPD GPNIL D T + LN +KDS+V GFQW +EG LC+E +R V+F + D + + +HRG GQIIPTARR Y++ L A PRLMEP+Y VEIQ P V IY VL+R+RGHV + GTP ++VKA+LPV ESFGF DLR +T GQAF VFDHW I+PGDP D S Sbjct: 605 KARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQY----LNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNS 828
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3) HSP 1 Score: 244.973 bits (624), Expect = 2.906e-64 Identity = 121/228 (53.07%), Postives = 148/228 (64.91%), Query Frame = 1 Query: 4 RVRPLVTGLAEDIENGVVSIDWSRKTLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 687 + RP GLAEDI+ G VS K + KY+WD+ AR IW FGPD GPNIL D T + LN +KDS+V GFQW +EG LC+E +R V+F + D + + +HRG GQIIPTARR Y++ L A PRLMEP+Y VEIQ P V IY VL+R+RGHV + GTP ++VKA+LPV ESFGF DLR +T GQAF VFDHW I+PGDP D S Sbjct: 605 KARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQY----LNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNS 828 The following BLAST results are available for this feature:
BLAST of EY757646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY757646 ID=EY757646; Name=EY757646; organism=Citrus sinensis; type=EST; length=694bpback to top |