EY757584

Overview
NameEY757584
Unique NameEY757584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY757584_ssr375 microsatellite EY757584_ssr375:375..386. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7683 contig Csv1_Contig7683:416..1329. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 3.706e-98
Identity = 169/192 (88.02%), Postives = 181/192 (94.27%), Query Frame = 2
Query:   14 GADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHIPEIVKL 589
            GADDK++ CV+E+EDKEG VGI+LSKDLMAIAGEALK+NITTIGPLVLPASEQLLFL +LIGRKIFNPKWKPYIPDFK AFEHFCIHAGGRAVIDELQKNLQLS E VEASRMTLHRFGNTSSSSLWYE+SYIE KGRM++GDRVWQIAFGSGFKCNSAVWKCN+TIKT  D PWSDCIDRYPV IPE+VKL
Sbjct:  306 GADDKSFYCVYEQEDKEGHVGINLSKDLMAIAGEALKANITTIGPLVLPASEQLLFLTSLIGRKIFNPKWKPYIPDFKLAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELSYIESKGRMRRGDRVWQIAFGSGFKCNSAVWKCNRTIKTPKDGPWSDCIDRYPVFIPEVVKL 497          
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 9.128e-97
Identity = 167/192 (86.98%), Postives = 178/192 (92.71%), Query Frame = 2
Query:   14 GADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHIPEIVKL 589
            GADDK+Y CV E+EDK G VGI+LSKDLM IAGEALK+NITTIGPLVLPASEQLLFL +LIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLS E VEASRMTLHRFGNTSSSSLWYE+SYIE +GRMK+ DRVWQIAFGSGFKCNSAVWKCN+TIKT TD  WSDCI+RYPV IPE+VKL
Sbjct:  301 GADDKSYNCVMEQEDKNGNVGINLSKDLMTIAGEALKANITTIGPLVLPASEQLLFLSSLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELSYIEAQGRMKRNDRVWQIAFGSGFKCNSAVWKCNRTIKTPTDGAWSDCIERYPVFIPEVVKL 492          
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 4.117e-81
Identity = 137/184 (74.46%), Postives = 164/184 (89.13%), Query Frame = 2
Query:   14 GADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPV 565
            GADDKA+RCV++E+D  G+ G+SLSKDLMAIAGE LK+NITT+GPLVLP SEQ+LF MTL+ +K+FN K KPYIPDFK AFEHFCIHAGGRAVIDEL+KNLQLS   VEASRMTLHRFGNTSSSS+WYE++YIE KGRM++G+RVWQIAFGSGFKCNSA+W+  + +K + ++PW DCID+YPV
Sbjct:  329 GADDKAFRCVYQEQDDTGRTGVSLSKDLMAIAGETLKTNITTLGPLVLPISEQILFFMTLVVKKLFNGKVKPYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLSPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRRGNRVWQIAFGSGFKCNSAIWEALRHVKPSNNSPWEDCIDKYPV 512          
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 3.485e-80
Identity = 138/187 (73.80%), Postives = 161/187 (86.10%), Query Frame = 2
Query:   11 EGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHI 571
            +GA +KA+ CV++E+D  GK G+SLSKDLMAIAGEALK+NITT+GPLVLP SEQ+LF MTL+ +K+FN K KPYIPDFK AF+HFCIHAGGRAVIDEL+KNLQLS   VEASRMTLHRFGNTSSSS+WYE++YIE KGRMKKG+RVWQIAFGSGFKCNSAVW     +K +  +PW  CIDRYPV +
Sbjct:  324 KGAVEKAFNCVYQEQDDNGKTGVSLSKDLMAIAGEALKANITTLGPLVLPISEQILFFMTLVTKKLFNSKLKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLSQTHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMKKGNRVWQIAFGSGFKCNSAVWVALNNVKPSVSSPWEHCIDRYPVKL 510          
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 8.314e-74
Identity = 126/191 (65.97%), Postives = 160/191 (83.77%), Query Frame = 2
Query:   11 EGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTD-NPWSDCIDRYPVHIPEI 580
            +GADDK + C+ +EED   K+G++LSK+LMA+AG+ALK+NITT+GPLVLP SEQLLF  TL+GRK+F  K KPYIPDFK AFEHFCIHAGGRAV+DEL+KNL+L+   +E SRMTL+RFGNTSSSSLWYE++Y E KGR+KKGDR+WQIAFGSGFKCNS+VW+  +++    + NPW D I  +PV +P++
Sbjct:  316 KGADDKCFGCITQEEDSASKIGVTLSKELMAVAGDALKTNITTLGPLVLPTSEQLLFFATLVGRKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLKLTEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRIWQIAFGSGFKCNSSVWRAVRSVNPKKEKNPWMDEIHEFPVEVPKV 506          
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 4.126e-73
Identity = 127/188 (67.55%), Postives = 159/188 (84.57%), Query Frame = 2
Query:   11 EGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWK-PYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHI 571
            +G+D+ A+ CV++E+D+  K G+SLSKDLMAIAGEALK+NIT++GPLVLP SEQ+LF  T + +++FN K K PYIPDFK A +HFCIHAGGRAVIDEL+K+L+LS + VEASRMTLHRFGNTSSSS+WYE++Y E KGRM+KG+RVWQIAFGSGFKCNSAVW   + ++ + +NPW  CI RYPV I
Sbjct:  298 KGSDENAFNCVYQEQDECLKTGVSLSKDLMAIAGEALKTNITSLGPLVLPISEQILFFATFVAKRLFNDKKKKPYIPDFKLALDHFCIHAGGRAVIDELEKSLKLSPKHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWVALRNVEPSVNNPWEHCIHRYPVKI 485          
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 2.048e-72
Identity = 134/200 (67.00%), Postives = 159/200 (79.50%), Query Frame = 2
Query:   11 EGADDKAYRCVFEEEDKE----GKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFN-PKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTD--NPWSDCIDRYPVHIPEIVKL 589
            +GADD A+ CV++ ED      GK+G+SLSK+LMAIAGEALK+NITT+GPLVLP SEQLLF  TL+ RK+F   K KPYIPDFK AFEHFCIHAGGRAV+DE++KNL LS   +E SRMTL+RFGNTSSSSLWYE++Y E KGR+K+GDR WQIAFGSGFKCNSAVWK  +TI    +  NPW D ID +PV +P I  +
Sbjct:  327 KGADDNAFGCVYQREDNNAEETGKIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTIDPMDEKTNPWIDEIDDFPVQVPRITPI 526          
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.674e-72
Identity = 125/189 (66.14%), Postives = 158/189 (83.60%), Query Frame = 2
Query:   11 EGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKT--TTDNPWSDCIDRYPVHI 571
            +G+DDK Y CV+++ED+ G +G+SL+++LM++AG+ALK+NITT+GP+VLP SEQL+FL++L+ RK+F  K KPYIPDFK AFEHFCIHAGGRAV+DE+QKNL L    +E SRMTLHRFGNTSSSSLWYEM+Y E KGR+K GDR+WQIAFGSGFKCNSAVWK  + + T   T N W+  ID+YPV +
Sbjct:  338 KGSDDKNYNCVYQKEDERGTIGVSLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKV 526          
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.917e-70
Identity = 130/196 (66.33%), Postives = 157/196 (80.10%), Query Frame = 2
Query:   11 EGADDKAYRCVFEEEDKEG--KVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFN-PKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTI-----KTTTDNPWSDCIDRYPVHIP 574
            +G+DD A+ CV++ ED +   ++G+SLSK+LMAIAGEALK+NITT+GPLVLP SEQLLF  TL+ RK+FN  K KPYIPDFK AFEHFCIHAGGRAV+DE++KNL LS   +E SRMTL+RFGNTSSSSLWYE++Y E KGR+K+GDR WQIAFGSGFKCNSAVW+  +TI     K    NPW D I  +PV +P
Sbjct:  321 KGSDDNAFNCVYQREDNDDNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNVKKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSKEKKKKTNPWIDEIHEFPVPVP 516          
BLAST of EY757584 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.721e-69
Identity = 118/186 (63.44%), Postives = 146/186 (78.49%), Query Frame = 2
Query:   14 GADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEQVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHI 571
            GADD++Y C  +EED++G VG+SLSK+L  +A   LK NI T+GPLVLP SE+  F +  + +K  NPK K YIPDFK AFEHFCIHAGGRA+IDE++KNL L+   VEASRMTLHRFGNTSSSS+WYE++Y E KGRM KGDR+WQIA GSGFKCNS+VW   + +K +T+NPW  C+ +YPV I
Sbjct:  302 GADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPISEKFHFFVRFVKKKFLNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMTKGDRIWQIALGSGFKCNSSVWVALRNVKPSTNNPWEQCLHKYPVEI 487          
The following BLAST results are available for this feature:
BLAST of EY757584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS6_ARATH3.706e-9888.023-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana ... [more]
KCS5_ARATH9.128e-9786.983-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana ... [more]
KCS4_ARATH4.117e-8174.463-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana ... [more]
KCS9_ARATH3.485e-8073.803-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana ... [more]
KCS11_ARATH8.314e-7465.973-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... [more]
KCS2_ARATH4.126e-7367.55Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis ... [more]
KCS19_ARATH2.048e-7267.003-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana... [more]
KCS1_ARATH2.674e-7266.143-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana ... [more]
KCS17_ARATH1.917e-7066.333-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana... [more]
KCS16_ARATH4.721e-6963.443-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-025-B05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757584 ID=EY757584; Name=EY757584; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGAAGGAGCTGATGACAAGGCTTATCGCTGCGTGTTTGAGG
AGGAAGACAAAGAGGGCAAAGTTGGGATTTCGCTGTCGAAAGATCTCATG
GCAATAGCTGGGGAAGCTCTCAAATCGAACATCACCACGATTGGTCCCCT
GGTCCTTCCTGCTTCGGAGCAGTTGCTGTTTCTCATGACACTCATCGGTC
GCAAAATCTTTAACCCGAAGTGGAAACCATACATTCCGGATTTCAAGCAG
GCGTTTGAGCACTTCTGTATACATGCGGGTGGAAGAGCGGTGATTGATGA
GTTGCAGAAGAACTTGCAGCTGTCAGCAGAGCAGGTGGAGGCCTCGAGGA
TGACACTGCATCGTTTTGGCAATACGTCGTCGTCGTCGCTTTGGTACGAG
ATGAGCTATATCGAAGAAAAGGGGAGGATGAAGAAGGGAGACAGAGTTTG
GCAGATTGCGTTTGGCAGTGGGTTTAAGTGTAACAGTGCGGTCTGGAAGT
GTAACAAGACGATTAAAACGACGACGGATAACCCTTGGTCCGATTGCATT
GATCGTTACCCAGTTCATATTCCTGAAATTGTCAAGCTCTAGAAAGCCCT
GAATTAGCCTCCTCGGTTTCATTGCTATGGGTTGCTACAGTTATTAAGAA
TCATCTCTTGCCTCATAAAATATTGATCTGGATTTGCATTTACTGCTGCT
GCCGCTGCTGCTGTGNTGTGAACTTAGGCTCTATTTGNTACTTGCACATT
TTTAATTTTTCTTTGTCAAAATATGCATCTGCCATATATAGCCCCGTATG
CACATTACATGTGTTCAAGTATGTGCCATGTAAGGAAAAACAAAACCATC
AAATTGTTGTTTGGAAAAAAAACGTTTAAACAGCGTTGAAATAACCTAGA
CTGGGGGGATAAA
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