EY757534
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY757534 vs. ExPASy Swiss-Prot
Match: LSM3_DICDI (Probable U6 snRNA-associated Sm-like protein LSm3 OS=Dictyostelium discoideum GN=lsm3 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.486e-25 Identity = 58/97 (59.79%), Postives = 65/97 (67.01%), Query Frame = 2 Query: 32 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXXRTTRRTVPFLFVRGDGVILVSPPLRTA 322 M EE V+EPLDLIRLSLDERI+VK+R DRELRGKLHAYDQHLNMIL R +R + LFVRGDGVIL+SPPLRT+ Sbjct: 1 MDKREEGTVEEPLDLIRLSLDERIFVKMRQDRELRGKLHAYDQHLNMILSDVEETIKVVEKDEETDEEIIRNIKRNIKMLFVRGDGVILISPPLRTS 97
BLAST of EY757534 vs. ExPASy Swiss-Prot
Match: LSM3_MOUSE (U6 snRNA-associated Sm-like protein LSm3 OS=Mus musculus GN=Lsm3 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 7.165e-25 Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 50 SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXXRTTRRTVPFLFVRGDGVILVSPPLR 316 + V+EPLDLIRLSLDERIYVK+R+DRELRG+LHAYDQHLNMILG ++T+R +P LFVRGDGV+LV+PPLR Sbjct: 12 NTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLR 100
BLAST of EY757534 vs. ExPASy Swiss-Prot
Match: LSM3_HUMAN (U6 snRNA-associated Sm-like protein LSm3 OS=Homo sapiens GN=LSM3 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 7.165e-25 Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 50 SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXXRTTRRTVPFLFVRGDGVILVSPPLR 316 + V+EPLDLIRLSLDERIYVK+R+DRELRG+LHAYDQHLNMILG ++T+R +P LFVRGDGV+LV+PPLR Sbjct: 12 NTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLR 100
BLAST of EY757534 vs. ExPASy Swiss-Prot
Match: LSM3_BOVIN (U6 snRNA-associated Sm-like protein LSm3 OS=Bos taurus GN=LSM3 PE=3 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 7.165e-25 Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 50 SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXXRTTRRTVPFLFVRGDGVILVSPPLR 316 + V+EPLDLIRLSLDERIYVK+R+DRELRG+LHAYDQHLNMILG ++T+R +P LFVRGDGV+LV+PPLR Sbjct: 12 NTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLR 100
BLAST of EY757534 vs. ExPASy Swiss-Prot
Match: LSM3_SCHPO (Probable U6 snRNA-associated Sm-like protein LSm3 OS=Schizosaccharomyces pombe GN=lsm3 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 9.063e-20 Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 41 EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXXRTTRRTVPFLFVRGDGVILVSPP 310 E AV EPLDL+RLSLDE +YVKLR DREL G+LHAYD+HLNM+LG +T R+ LFVRGD VIL++PP Sbjct: 2 ESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFVRGDSVILIAPP 91 The following BLAST results are available for this feature:
BLAST of EY757534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY757534 ID=EY757534; Name=EY757534; organism=Citrus sinensis; type=EST; length=519bpback to top |