EY757514

Overview
NameEY757514
Unique NameEY757514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757514 vs. ExPASy Swiss-Prot
Match: ZN363_HUMAN (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.793e-23
Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 2
Query:   47 VMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSRTWKRIDEEIEATVMPEDYRHKKVWILCNDCNDTTEVYFHIIGQKCSHCKSYNT 313
            V+ CGH +H  CY EM+K + Y CP+C  S +DM+R W+++D+E+  T MP +Y++  V ILCNDCN  + V FHI+G KC  C+SYNT
Sbjct:  161 VLPCGHLLHRTCYEEMLK-EGYRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKICESYNT 248          
BLAST of EY757514 vs. ExPASy Swiss-Prot
Match: ZN363_MOUSE (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.898e-23
Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 2
Query:   47 VMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSRTWKRIDEEIEATVMPEDYRHKKVWILCNDCNDTTEVYFHIIGQKCSHCKSYNT 313
            V+ CGH +H  CY EM+K + Y CP+C  S +DM+R W+++D E+  T MP +Y++  V ILCNDCN  + V FHI+G KC  C SYNT
Sbjct:  161 VLPCGHLLHRTCYEEMLK-EGYRCPLCMHSALDMTRYWRQLDTEVAQTPMPSEYQNVTVDILCNDCNGRSTVQFHILGMKCKLCDSYNT 248          
BLAST of EY757514 vs. ExPASy Swiss-Prot
Match: YERG_SCHPO (Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe GN=SPAC2F3.16 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.123e-16
Identity = 38/99 (38.38%), Postives = 55/99 (55.56%), Query Frame = 2
Query:   17 YLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSRTWKRIDEEIEATVMPEDYRHKKVWILCNDCNDTTEVYFHIIGQKCSHCKSYNT 313
            Y+F+S      + C H +H  C+ E I R  Y CP C K++I+++  ++ +D EIE   MP  Y      I CNDCN   +  +H +G KC+ C SYNT
Sbjct:  277 YMFNSRERVIFLSCSHPLHQRCHEEYI-RTNYRCPTCYKTIINVNSLFRILDMEIERQPMPYPYNTWISTIRCNDCNSRCDTKYHFLGHKCNSCHSYNT 374          
The following BLAST results are available for this feature:
BLAST of EY757514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ZN363_HUMAN1.793e-2350.56RING finger and CHY zinc finger domain-containing ... [more]
ZN363_MOUSE8.898e-2350.56RING finger and CHY zinc finger domain-containing ... [more]
YERG_SCHPO2.123e-1638.38Uncharacterized RING finger protein C2F3.16 OS=Sch... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-024-C10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757514 ID=EY757514; Name=EY757514; organism=Citrus sinensis; type=EST; length=673bp
CCACGCGTCCGTGTAGTACCTATTTGACTCACTCAGGAACACTACTGTTA
TGAAATGTGGGCACACCATGCATTGTGAATGTTACCATGAGATGATAAAG
CGTGATAAATACTGTTGTCCCATATGCTCCAAGTCTGTGATTGACATGTC
CAGGACCTGGAAGAGAATAGATGAGGAGATAGAAGCAACTGTGATGCCTG
AGGACTACCGGCACAAGAAGGTTTGGATCCTATGCAATGACTGCAATGAC
ACAACTGAGGTTTACTTCCATATAATTGGGCAAAAATGTAGTCACTGCAA
ATCCTACAATACCCGCTCAATTGCACCTCCAGTTCTGCCTCAGTAACATG
GTTGCTGCTTTCCACAAATTGTATTCTGTCAGCCGCTTCAAAAGCTTGCA
CCCTGAGCATATAGCAGAAAGGGAGATTTGTGATTGGGTAGTAAAAAATT
GTTAGTCTGATACTAAATTGATGCCTGTATAATTGCATCTATGGTTCGAA
AGGACTCCAAGCATTTGTATTTTGTGCATCAGAAAACTCTACAGATCATT
CTTCCTCCGTCTAATTTATGGAGTTCAAATCAAACCCAGCTGATGGGTTC
TGAGGTTGATGTAAAACTTATATACAGTAAAAGGGAACAAATATAATCAT
TGTTATAAACTATATCATGCATC
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