EY757476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: SSRP1_VICFA (FACT complex subunit SSRP1 OS=Vicia faba GN=SSRP1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.794e-42 Identity = 78/106 (73.58%), Postives = 93/106 (87.74%), Query Frame = 2 Query: 11 ARDGDEDGXXXXXXXXXDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA 328 ++D D DG DPNAPKRA+SGF+FFSQMEREN+KK+NPGI+FTDVGRVLGE+WK +S EE+EPYE+KA+ADKKRYKDEISGYKNP+PM++DSGNESDSA Sbjct: 537 SKDADVDGVKKKQKKKKDPNAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQADKKRYKDEISGYKNPQPMNVDSGNESDSA 642
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: SSRP1_ARATH (FACT complex subunit SSRP1 OS=Arabidopsis thaliana GN=SSRP1 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.308e-35 Identity = 64/88 (72.73%), Postives = 83/88 (94.32%), Query Frame = 2 Query: 62 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDS 325 DPNAPKRAMSGF+FFSQMER+NIKK +PGIAF +VG+VLG++W++MS +++EPYE+KA+ DK+RYKDEIS YKNP+PM++DSGN+SDS Sbjct: 558 DPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEISDYKNPQPMNVDSGNDSDS 645
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: SSRP1_CATRO (FACT complex subunit SSRP1 OS=Catharanthus roseus GN=SSRP1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.656e-27 Identity = 57/89 (64.04%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 62 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA 328 DPNAPK ++S F+FFSQ EREN+KK NPGIAFTDVG+VLG+R K + ++ + + ADKKRY DEIS YKNP+PM++DSGN+SDSA Sbjct: 552 DPNAPK-SISAFMFFSQTERENVKKDNPGIAFTDVGKVLGDRCNKCQLRKKHLLKQRLVADKKRYTDEISNYKNPQPMNVDSGNDSDSA 639
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: SSRP1_MAIZE (FACT complex subunit SSRP1 OS=Zea mays GN=SSRP1 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.442e-22 Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 2 Query: 11 ARDGDEDGXXXXXXXXXDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESD 322 ARD DE DPNAPKRAM+ F++FS ER N+K SNP + T++ + LGE W+KMS EE++PY +A+ DKKRY+ E + Y+ +D+DSGNESD Sbjct: 537 ARD-DEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEKESAVYRGEATVDVDSGNESD 639
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: SSP1B_ORYSJ (FACT complex subunit SSRP1-B OS=Oryza sativa subsp. japonica GN=SSRP1-B PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.883e-22 Identity = 45/87 (51.72%), Postives = 66/87 (75.86%), Query Frame = 2 Query: 62 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESD 322 DPNAPKRA++ F++FS+ ER N+K SNP +A T++ + LGERW+KM+ EE++PY +++ DKKRY +E + Y+ MD+DSG SD Sbjct: 554 DPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMTAEEKQPYVEQSQVDKKRYAEESAAYRGAAAMDVDSGPASD 640
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: NHP6_NEUCR (Non-histone chromosomal protein 6 OS=Neurospora crassa GN=nhp-6 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.033e-20 Identity = 41/72 (56.94%), Postives = 58/72 (80.56%), Query Frame = 2 Query: 62 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 277 DPNAPKR +S ++FF+ +REN+++ NPG++F VG++LGERWK +S ++R PYE+KA ADKKRY+DE Y Sbjct: 22 DPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: NHP6_GIBZE (Non-histone chromosomal protein 6 OS=Gibberella zeae GN=NHP6 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.302e-20 Identity = 41/72 (56.94%), Postives = 58/72 (80.56%), Query Frame = 2 Query: 62 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 277 DPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK ++ ++R PYE+KA ADKKRY+DE Y Sbjct: 20 DPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRYEDEKQAY 91
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: SSP1A_ORYSJ (FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica GN=SSRP1-A PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 45/90 (50.00%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 62 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDS---GNESD 322 DPNAPKRAM+ F++FS ER N+K +NP + T++ + LGE W+KM+ EE++PY +++ DKKRY+ E + Y+ MD+DS GNESD Sbjct: 552 DPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKMTGEEKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD 641
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: NHP6_EMENI (Non-histone chromosomal protein 6 OS=Emericella nidulans GN=nhp6 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 41/73 (56.16%), Postives = 58/73 (79.45%), Query Frame = 2 Query: 62 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 280 DPNAPKR +S ++FF+ R+ +++ NPGI+F VG++LGE+WK +S +ER+PYE KA ADKKRY+DE + YK Sbjct: 23 DPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGEKWKSLSDKERKPYEDKAAADKKRYEDEKAAYK 95
BLAST of EY757476 vs. ExPASy Swiss-Prot
Match: NHP6_ASPFU (Non-histone chromosomal protein 6 OS=Aspergillus fumigatus GN=nhp6 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.746e-20 Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 2 Query: 62 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMD 298 DPNAPKR +S ++FF+ R+ +++ NPGI+F VG++LGERWK +S ER PYE KA ADKKRY+DE + Y + D Sbjct: 21 DPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDSERRPYEEKAAADKKRYEDEKASYNAAQDED 99 The following BLAST results are available for this feature:
BLAST of EY757476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >EY757476 ID=EY757476; Name=EY757476; organism=Citrus sinensis; type=EST; length=654bpback to top |