EY757401

Overview
NameEY757401
Unique NameEY757401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY757401 vs. ExPASy Swiss-Prot
Match: PSB3A_ARATH (Proteasome subunit beta type-3-A OS=Arabidopsis thaliana GN=PBC1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.169e-11
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 2 
Query:   41 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 130
            DRDCLSGWGGHVYIVTPTEIKERILKGRMD
Sbjct:  175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
[Close]
BLAST of EY757401 vs. ExPASy Swiss-Prot
Match: PSB3B_ARATH (Proteasome subunit beta type-3-B OS=Arabidopsis thaliana GN=PBC2 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:   41 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 130
            DRDCLSGWGGHVY+VTP E+KERILKGRMD
Sbjct:  175 DRDCLSGWGGHVYVVTPKEVKERILKGRMD 204
The following BLAST results are available for this feature:
BLAST of EY757401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PSB3A_ARATH1.169e-11100.00Proteasome subunit beta type-3-A OS=Arabidopsis th... [more]
PSB3B_ARATH9.893e-1190.00Proteasome subunit beta type-3-B OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757401 ID=EY757401; Name=EY757401; organism=Citrus sinensis; type=EST; length=381bp
CCACGCGTCCGCTGTATCTCTAGCTTTGTTATCATCTGTTGACCGTGACT
GTTTGAGTGGTTGGGGAGGACATGTCTACATTGTAACACCAACTGAAATA
AAGGAAAGAATCTTGAAGGGAAGGATGGATTGATCTATAACTGCAGTGCT
GAAAGCCACCCCTTCTCTTGTGTTCGCTCTCCAGTATTTTTCAATTAGAA
GACCGTAGACTTGAACTTGACTTTCATTTGTTTATGAAGAATGTTGTTTA
ATAGCTCTCAAATTGTTGTACTCTGAAATAGTTTCAAACTGAATTGACCA
AGTTCGTGGGCTTGCGGTTATCTGGATGGATGAAAGCGTTTCTATCAATT
GAGGTTTTGATCAAAAAAAAAAAAAAAAAAA
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