EY757387

Overview
NameEY757387
Unique NameEY757387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY757387 vs. ExPASy Swiss-Prot
Match: IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.194e-27
Identity = 76/159 (47.80%), Postives = 97/159 (61.01%), Query Frame = 3 
Query:   12 KSTILTATRPVRSPSSSKIPQGSPSLSKYSRARVSGAASPFDVPLRDDDSLMSCPPFSVPNYMTPTVSAKAKVRPNSNPKERFPGTPSSESQRRLSFPLTQGIGSFKWXXXXXXXXXXXXXXQR------VLDKNQSLQSIGNLSVDSTVSMPATVGRK 470
            +ST  T +RP+ + +S           +YSR R+ G  SPF    +DDDSL SCPPF  P+YM PTVSAKAKVRPNSNPKER  GTP SE +RR+S+P TQ   +F+W                      VL+K+++L+S+GNLS+ ST SM  TVGRK
Sbjct:  524 RSTFHTPSRPIHTGTS-----------RYSRGRLRGQDSPF----KDDDSLTSCPPF--PSYMAPTVSAKAKVRPNSNPKERVMGTPVSE-KRRMSYPPTQ--DTFRWNKGSLVMSNSSSHRGPGSPGGVVLEKHKTLKSVGNLSIGSTASMATTVGRK 662
The following BLAST results are available for this feature:
BLAST of EY757387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IQD14_ARATH2.194e-2747.80Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQ... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-G06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757387 ID=EY757387; Name=EY757387; organism=Citrus sinensis; type=EST; length=699bp
CCACGCGTCCGAAATCAACCATACTCACAGCAACACGACCTGTTCGAAGT
CCATCCTCAAGTAAGATCCCACAAGGCAGTCCAAGCCTGTCAAAATACTC
GAGAGCAAGAGTTAGTGGAGCTGCTTCTCCTTTTGACGTACCATTGAGGG
ACGATGACAGCCTCATGAGCTGCCCGCCATTTTCTGTTCCAAACTATATG
ACACCGACCGTTTCGGCAAAAGCAAAAGTGAGACCTAATAGTAATCCTAA
GGAGAGGTTCCCAGGAACTCCAAGCAGTGAATCACAAAGAAGGCTTTCTT
TCCCTTTAACACAAGGCATTGGCTCTTTCAAGTGGAAAAAAGGTTCATTG
CTCTCTACTAGCAAGGATTCCAGCTCTCAAAGGGTTTTAGACAAGAATCA
ATCTCTACAATCTATAGGAAATTTGAGTGTGGATTCAACTGTTTCCATGC
CGGCTACTGTCGGTCGGAAGCCGTTTAACCGATTCGTGTGATTTTTTTTT
CCCATAATTTTTTAACTTTTTTCTTTGATTTCTTGGTGTTATTTGATTGA
GTGTATGATTATATATATTTGGGTTTTTTTTCCCCTTATAAAAGATACTG
ATGTAAGACAATAAACATAGGAAATGATGTATTGGGTGTAACGGGATTGG
TGTTTCTTTTGAGATATCATAATACTTAATTTTTTTCTTTTATTTTTAA
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