EY757386

Overview
NameEY757386
Unique NameEY757386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_HEVBR (Superoxide dismutase [Mn], mitochondrial OS=Hevea brasiliensis GN=SODA PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.394e-42
Identity = 78/87 (89.66%), Postives = 81/87 (93.10%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 271
            AEGAALQGSGWVWL LD E K+LVVETTANQDPLVTK PTLVPLLGIDVWEHAYYLQYKNV+PDYLKNIW VMNWKYAS+VY KECP
Sbjct:  145 AEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYAKECP 231          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_CAPAN (Superoxide dismutase [Mn], mitochondrial OS=Capsicum annuum GN=SODA PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.057e-42
Identity = 76/87 (87.36%), Postives = 81/87 (93.10%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 271
            AEGAALQGSGWVWLGLD E KRLV+ETTANQDPLV K P LVPLLGIDVWEHAYYLQYKNVKPDYLKNIW V+NWKYA++VY+KECP
Sbjct:  142 AEGAALQGSGWVWLGLDKELKRLVIETTANQDPLVIKGPNLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWKVINWKYAAEVYEKECP 228          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_PRUPE (Superoxide dismutase [Mn], mitochondrial OS=Prunus persica GN=SOD PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.629e-41
Identity = 76/87 (87.36%), Postives = 81/87 (93.10%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 271
            AEGAALQGSGWVWL LD E K+LVVETTANQDPLVTK PTLVPLLGIDVWEHAYYLQYKNV+PDYLKNIW V+NWKYAS+VY+KE P
Sbjct:  142 AEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKESP 228          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_NICPL (Superoxide dismutase [Mn], mitochondrial OS=Nicotiana plumbaginifolia GN=SODA PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.434e-41
Identity = 74/87 (85.06%), Postives = 81/87 (93.10%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 271
            AEGAALQGSGWVWLG+D E KRLV+ETTANQDPLV+K   LVPLLGIDVWEHAYYLQYKNV+PDYLKNIW VMNWKYA++VY+KECP
Sbjct:  142 AEGAALQGSGWVWLGVDKELKRLVIETTANQDPLVSKGANLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYANEVYEKECP 228          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_ARATH (Superoxide dismutase [Mn], mitochondrial OS=Arabidopsis thaliana GN=SODA PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 3.554e-38
Identity = 69/85 (81.18%), Postives = 80/85 (94.12%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 265
            AEGAA+QGSGWVWLGLD E K+LVV+TTANQDPLVTK  +LVPL+GIDVWEHAYYLQYKNV+P+YLKN+W V+NWKYAS+VY+KE
Sbjct:  145 AEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEKE 229          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_ORYSJ (Superoxide dismutase [Mn], mitochondrial OS=Oryza sativa subsp. japonica GN=SODA PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.950e-36
Identity = 69/83 (83.13%), Postives = 73/83 (87.95%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            AEGAALQGSGWVWL LD E K+L VETTANQDPLVTK   LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+
Sbjct:  145 AEGAALQGSGWVWLALDKEAKKLSVETTANQDPLVTKGANLVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVYE 227          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM4_MAIZE (Superoxide dismutase [Mn] 3.4, mitochondrial OS=Zea mays GN=SODA.3 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.547e-36
Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            AEGAALQGSGWVWL LD E K+L VETTANQDPLVTK  +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+
Sbjct:  147 AEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 229          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM2_MAIZE (Superoxide dismutase [Mn] 3.2, mitochondrial OS=Zea mays GN=SODA.1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.547e-36
Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            AEGAALQGSGWVWL LD E K+L VETTANQDPLVTK  +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+
Sbjct:  146 AEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 228          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM3_MAIZE (Superoxide dismutase [Mn] 3.3, mitochondrial OS=Zea mays GN=SODA.2 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.326e-36
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            AEGAALQGSGWVWL LD E K++ VETTANQDPLVTK  +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+
Sbjct:  147 AEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 229          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM1_MAIZE (Superoxide dismutase [Mn] 3.1, mitochondrial OS=Zea mays GN=SODA.4 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.326e-36
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            AEGAALQGSGWVWL LD E K++ VETTANQDPLVTK  +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+
Sbjct:  149 AEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 231          
The following BLAST results are available for this feature:
BLAST of EY757386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
SODM_HEVBR1.394e-4289.66Superoxide dismutase [Mn], mitochondrial OS=Hevea ... [more]
SODM_CAPAN4.057e-4287.36Superoxide dismutase [Mn], mitochondrial OS=Capsic... [more]
SODM_PRUPE2.629e-4187.36Superoxide dismutase [Mn], mitochondrial OS=Prunus... [more]
SODM_NICPL3.434e-4185.06Superoxide dismutase [Mn], mitochondrial OS=Nicoti... [more]
SODM_ARATH3.554e-3881.18Superoxide dismutase [Mn], mitochondrial OS=Arabid... [more]
SODM_ORYSJ1.950e-3683.13Superoxide dismutase [Mn], mitochondrial OS=Oryza ... [more]
SODM4_MAIZE2.547e-3683.13Superoxide dismutase [Mn] 3.4, mitochondrial OS=Ze... [more]
SODM2_MAIZE2.547e-3683.13Superoxide dismutase [Mn] 3.2, mitochondrial OS=Ze... [more]
SODM3_MAIZE3.326e-3681.93Superoxide dismutase [Mn] 3.3, mitochondrial OS=Ze... [more]
SODM1_MAIZE3.326e-3681.93Superoxide dismutase [Mn] 3.1, mitochondrial OS=Ze... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-G05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757386 ID=EY757386; Name=EY757386; organism=Citrus sinensis; type=EST; length=603bp
CACGCGTCCGGCTGAGGGTGCAGCTTTGCAGGGCTCTGGATGGGTGTGGC
TTGGTTTAGATACAGAGTTTAAAAGGCTTGTGGTTGAAACTACTGCAAAT
CAGGATCCACTGGTGACTAAAGCCCCAACTCTGGTTCCTTTGCTTGGTAT
AGATGTTTGGGAGCATGCATACTACCTACAGTACAAGAATGTCAAACCAG
ATTATCTGAAAAACATTTGGAACGTAATGAACTGGAAGTATGCTAGTGAT
GTGTATCAGAAAGAATGCCCTTAAGCTTGGAGCTCTTCCTTGAGCATGGA
GTTCTTTGTTTGATCTGGGTTCTCTCTTGGGTTCAAGAGGCGAATACCCT
TGCAGCTTTTCACGCTGAAGTGACAATAAAACGATAATTTGCAACTGATG
ACAGACACCCTTTCTTTTGCAGTGAGTGTTACTTGTGTATCCCTTATGTG
ACATCCAAAATAATATTGGGGTTTATGCTCTTTTTGTATCTCACTATGTG
CACGGATCTGTGAATATGTATGATTGGGTTTCTATTTTCTATTTGTTTAA
TGGCGTAACATCATCAATGCTTTGTTCAAAAAAAAAAAAAAAAAAAAAAA
AAA
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