EY757382

Overview
NameEY757382
Unique NameEY757382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY757382 vs. ExPASy Swiss-Prot
Match: U136_ARATH (UPF0136 membrane protein At2g26240 OS=Arabidopsis thaliana GN=At2g26240 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 40/107 (37.38%), Postives = 51/107 (47.66%), Query Frame = 2 
Query:  194 MGMSMSQKXXXXXXXXXXXXXXXXXXKSGSHKXXXXXXXXXXXXYYVYTQLPTKPVXXXXXXXXXXXXXXXVMGSRFNKSGKVFPAGVVSLISLVMTGGYLHGIMRS 514
            M  S+SQK                  K GS              YYVYT+LP  PV               +MGSR+ ++ KV PAG+VS++SLVMTG YLHG++RS
Sbjct:    1 MDSSLSQKFTLAYASLLGVGGLMGYLKRGSKISLVAGGGSAALFYYVYTELPGNPVLASSIGIVGSAALTGMMGSRYLRTRKVVPAGLVSVVSLVMTGAYLHGLIRS 107
The following BLAST results are available for this feature:
BLAST of EY757382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
U136_ARATH6.886e-1137.38UPF0136 membrane protein At2g26240 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-F12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757382 ID=EY757382; Name=EY757382; organism=Citrus sinensis; type=EST; length=858bp
CGTCAGCTGTGCATCGCCGACACCGTCGACTCTAGAAAGGGAGTGGATCG
AGATCGAGCCTGATATCGGAGGCGGAGGCGGAGACGGTAGCGGTATCGGC
GGCGGATGTGGTGGCGGTGGAGGCGGAGGCGGACGTGAATGTGAAGGTGA
AGGTGAGGGGGAGTCGTCGGACTAAAGTGGGAAGAAGAATAACATGGGGA
TGTCTATGTCTCAGAAACTCACTCTTGGTTATGCTGCCCTTGTTGGAGTG
GGTGGTCTTATGGGATATCTGAAAAGTGGGAGTCATAAGTCTCTGTTAGC
AGGAGGAGTGTCTGCCTCGCTGCTTTATTATGTTTATACTCAGCTTCCCA
CAAAGCCAGTTCTTGCATCTTCCATAGGGCTTGGCTTATCTGCTGCTCTT
TTGGGAGTGATGGGTTCTCGTTTCAATAAGTCAGGGAAGGTATTTCCAGC
CGGTGTGGTCTCTCTCATTTCCCTTGTGATGACAGGGGGATACCTACATG
GCATCATGCGCAGTCTGCATTAAAATTCATATTATGTTAAGACAGTGATG
GTAGAGATGAACTTTTAGCGTTCCTGTTTATGTGGTAACTGCAATGAGTG
TTTTTGGCATGTAATGTCCTTGAGACTATACATGCTGAGTGTGTGCACAT
TGTGTATACCATCTTTCCGGAGTTTACAGTGTTGGAAAGCACGTGCATGT
ACATTGTGCTCATGCCATTGTAGGTCTTGTTCCCGAACTTTGTTTGGTTC
TACGCTAATTTCTTNGCCGACGACTGACGTCACTTTATTAAACATCGTTT
GTAAGTGGNTGAAAAACTGGGANAAACCGATACTACAAATATAGGCCGGT
CGCTCTAA
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