EY757380

Overview
NameEY757380
Unique NameEY757380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY757380 vs. ExPASy Swiss-Prot
Match: PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 35/81 (43.21%), Postives = 43/81 (53.09%), Query Frame = 1 
Query:   94 IDTLKLGACVDLLGGLVHIGLGDPIVNQCCPVLQGLVELEAAVXXXXXXXXXXXXXXXXXXXXXXXXV-TCGKTPPAGFTC 333
            ID LKLGACVD+LGGL+HIG+G      CCP+L GLV+L+AA+                        +  CGK PP  F C
Sbjct:  263 IDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINIILPIALQVLIDDCGKYPPKDFKC 343
The following BLAST results are available for this feature:
BLAST of EY757380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PRF1_SOLLC2.220e-1143.2136.4 kDa proline-rich protein OS=Solanum lycopersi... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-F10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757380 ID=EY757380; Name=EY757380; organism=Citrus sinensis; type=EST; length=608bp
CCACGCGTCCGAGTTCTCCCTAACCCACCAAGTGCTAGGAAGCCATGCCC
ATGTTCATACACACCACCTCCACCAGCTGCTGCCACATGCCCCATTGACA
CCCTCAAATTGGGTGCTTGTGTGGACCTTCTTGGTGGGTTGGTTCACATT
GGTCTTGGTGACCCAATTGTTAACCAATGCTGCCCAGTTCTACAAGGACT
TGTTGAGTTAGAAGCTGCTGTCTGCTTGTGCACTACTCTCAAGCTCAAGC
TGCTTAATCTTAACATCTATCTTCCACTTGCTCTTCAGCTTCTTGTCACT
TGCGGAAAGACACCACCCGCTGGTTTCACTTGCACTCTTTAGATCTAAGG
TTGGTAGATTGATGATGGATACTGAAGGAAGAAATCGACATGAAAGGATG
TCGAGACTTATTTGTTTGTTTCTTTTTCTCTCTCCCCCACTCTCTCTGTC
TTTCTCTCATTGTTGGGATTGTAATGTTTGGTCACATTTAATTGTACACC
CATTTGTTTTTATATGATTTGTCGCATTGTATGTGTGTTTTCAATGTCCT
TGACAAGGCAGCAATTATTTGATTTTCCTACCTCAAAAAAAAAAAAAAAA
AAAAAATA
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