EY757353

Overview
NameEY757353
Unique NameEY757353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757353 vs. ExPASy Swiss-Prot
Match: SPL1_ARATH (Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 116/217 (53.46%), Postives = 141/217 (64.98%), Query Frame = 3
Query:   15 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR-PNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLCHQKLGYATASRSLVYKPAMLSMXXXXXXXXXXXLLFKSALKV 662
            L+EL LLHRAVRKNS+P+V++LLR++P +                 +  LFRPD  GPAGLTP+HIAAGKDGSEDVLDALT+DP MVGIEAWK  RDS+G TPEDYARLRGH+SYIHL+Q+KINK+     HVVV+I     D    + ++    ++ EI Q P       CKLC  KL Y T  RS+ Y+PAMLSM           LLFKS  +V
Sbjct:  671 LSELCLLHRAVRKNSKPMVEMLLRYIPKQ----------------QRNSLFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTEDPAMVGIEAWKTCRDSTGFTPEDYARLRGHFSYIHLIQRKINKKSTTEDHVVVNIPVSFSDREQKEPKSGPMASALEITQIP-------CKLCDHKLVYGTTRRSVAYRPAMLSMVAIAAVCVCVALLFKSCPEV 864          
BLAST of EY757353 vs. ExPASy Swiss-Prot
Match: SPL12_ARATH (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.601e-52
Identity = 119/223 (53.36%), Postives = 150/223 (67.26%), Query Frame = 3
Query:   12 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNG-GHVVVDICGVVPDS-NIYQKQNNES---TASFEIGQTPVRPTQHNCKLC-HQKLGYATASRSLVYKPAMLSMXXXXXXXXXXXLLFKSALKV 662
            AL+EL LLHRAVRKNS+P+V++LLRF P + +  L               LFRPD  GP GLTP+HIAAGKDGSEDVLDALT+DPGM GI+AWKN+RD++G TPEDYARLRGH+SYIHLVQ+K++++P    HVVV+I    P+S NI  KQ   S   ++S EI Q       + CKLC H+++   T  +S+ Y+PAMLSM           LLFKS  +V
Sbjct:  711 ALSELCLLHRAVRKNSKPMVEMLLRFSPKKKNQTLAG-------------LFRPDAAGPGGLTPLHIAAGKDGSEDVLDALTEDPGMTGIQAWKNSRDNTGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEHVVVNI----PESFNIEHKQEKRSPMDSSSLEITQI------NQCKLCDHKRVFVTTHHKSVAYRPAMLSMVAIAAVCVCVALLFKSCPEV 910          
BLAST of EY757353 vs. ExPASy Swiss-Prot
Match: SPL6_ORYSJ (Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.153e-34
Identity = 90/213 (42.25%), Postives = 118/213 (55.40%), Query Frame = 3
Query:   30 LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLC-HQKLGYA-TASRSLVYKPAMLSMXXXXXXXXXXXLLFKSALKV 662
            LLH AVR  S  +V  LL + P E   R               FLFRPD  GP+  TP+HIAA  D +EDVLDALT+DPG+VGI  W+NARD +G TPEDYAR RG+ +Y+++V+KKINK    GHVV+ +   +    +          S EIG T V P   +C  C  Q L Y  + +R+ +Y+PAML++           LL  +  KV
Sbjct:  755 LLHAAVRMKSAQMVRFLLGYKPNESLKRTAET-----------FLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNARDGAGFTPEDYARQRGNDAYLNMVEKKINKHLGKGHVVLGVPSSI--HPVITDGVKPGEVSLEIGMT-VPPPAPSCNACSRQALMYPNSTARTFLYRPAMLTVMGIAVICVCVGLLLHTCPKV 953          
BLAST of EY757353 vs. ExPASy Swiss-Prot
Match: SPL1_ORYSJ (Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.471e-31
Identity = 82/202 (40.59%), Postives = 113/202 (55.94%), Query Frame = 3
Query:   30 LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG----FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTAS------FEIGQTPVRPTQHNCKLCHQKLGYA-TASRSLVYKPAMLSM 602
            L+  AV K S+PL+D LL +          + + A +DG        FLF PD+ GP+ +TP+HIAA    +  VLDALTDDP  +GI+AWKNARD++G TPEDYAR RGH SYI +VQ KI+ R    HV V I      ++  +K  ++S  +       E GQ        +C+ C  +L Y    +R L  +PA+LS+
Sbjct:  634 LVFVAVNKRSKPLIDFLLTY----------TTSSAPMDGTESAAPAQFLFTPDIAGPSDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWKNARDATGLTPEDYARKRGHESYIEMVQNKIDSRLPKAHVSVTISSTTSTTDFTEKHASQSKTTDQTAFDVEKGQQISTKPPLSCRQCLPELAYRHHLNRFLSTRPAVLSL 825          
BLAST of EY757353 vs. ExPASy Swiss-Prot
Match: SPL14_ARATH (Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.493e-21
Identity = 58/164 (35.37%), Postives = 97/164 (59.15%), Query Frame = 3
Query:   15 LTELGLLHRAVRKNSRPLVDLLLRFV--PLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI----NKRP--NGGHVVVDICGVVPDSNIYQKQNNESTAS 482
            L E+ LL+RAV++ S  +V+LL+ ++  PL +S               + F+F P++ GP G+TP+H+AA   GS+D++D LT+DP  +G+ +W   RD++G TP  YA +R +++Y  LV +K+    NK+   N  H VVD  G+    ++   +++ S AS
Sbjct:  822 LAEIQLLNRAVKRKSTKMVELLIHYLVNPLTLSSS-------------RKFVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNKQVSLNIEHEVVDQTGLSKRLSLEMNKSSSSCAS 972          
BLAST of EY757353 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSJ (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 52/132 (39.39%), Postives = 78/132 (59.09%), Query Frame = 3
Query:    3 TRPALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN 398
            T   L+E+ LL+RAV++ S  +  LL++FV +   D              K + F P+V GP GLTP+H+AA  + + D++DALTDDP  +G+  W +A D  G +PE YA+LR + +Y  LV +K+  R N
Sbjct:  921 TLEMLSEIHLLNRAVKRKSSHMARLLVQFVVVCPDDS-------------KLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDRKN 1039          
BLAST of EY757353 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSI (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 52/132 (39.39%), Postives = 78/132 (59.09%), Query Frame = 3
Query:    3 TRPALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN 398
            T   L+E+ LL+RAV++ S  +  LL++FV +   D              K + F P+V GP GLTP+H+AA  + + D++DALTDDP  +G+  W +A D  G +PE YA+LR + +Y  LV +K+  R N
Sbjct:  921 TLEMLSEIHLLNRAVKRKSSHMARLLVQFVVVCPDDS-------------KLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDRKN 1039          
BLAST of EY757353 vs. ExPASy Swiss-Prot
Match: SPL16_ARATH (Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.299e-17
Identity = 41/129 (31.78%), Postives = 73/129 (56.59%), Query Frame = 3
Query:   15 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNG 401
            L ++ LL+RA+++ +  + + L+ +                V+   + F+F P + GP  +TP+H+AA    S+D++DALT+DP  +G+  W    D++G TP  YA +R ++SY  LV +K+  + NG
Sbjct:  783 LADIQLLNRAIKRRNTKMAETLIHYS---------------VNPSTRNFIFLPSIAGPGDITPLHLAASTSSSDDMIDALTNDPQEIGLSCWNTLVDATGQTPFSYAAMRDNHSYNTLVARKLADKRNG 896          
The following BLAST results are available for this feature:
BLAST of EY757353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SPL1_ARATH1.710e-5453.46Squamosa promoter-binding-like protein 1 OS=Arabid... [more]
SPL12_ARATH1.601e-5253.36Squamosa promoter-binding-like protein 12 OS=Arabi... [more]
SPL6_ORYSJ1.153e-3442.25Squamosa promoter-binding-like protein 6 OS=Oryza ... [more]
SPL1_ORYSJ3.471e-3140.59Squamosa promoter-binding-like protein 1 OS=Oryza ... [more]
SPL14_ARATH2.493e-2135.37Squamosa promoter-binding-like protein 14 OS=Arabi... [more]
SPL15_ORYSJ1.047e-1939.39Squamosa promoter-binding-like protein 15 OS=Oryza... [more]
SPL15_ORYSI1.047e-1939.39Squamosa promoter-binding-like protein 15 OS=Oryza... [more]
SPL16_ARATH8.299e-1731.78Squamosa promoter-binding-like protein 16 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757353 ID=EY757353; Name=EY757353; organism=Citrus sinensis; type=EST; length=851bp
CCACGCGTCCGGCACTGACAGAGCTGGGACTTCTTCACAGAGCTGTGAGG
AAAAATTCTCGTCCTCTGGTGGATCTCCTTTTGAGATTTGTTCCGCTAGA
AGTTTCTGATAGATTAGGATCTGAAAACAAGGCACTTGTTGATGGTGTCC
ATAAAGGCTTCTTGTTTAGACCTGATGTCATTGGCCCTGCAGGTTTGACC
CCAATTCACATTGCAGCTGGTAAGGATGGCTCTGAGGATGTACTGGATGC
ATTAACTGATGATCCTGGAATGGTGGGAATTGAAGCGTGGAAGAATGCTC
GTGACAGCTCAGGCTCTACACCCGAAGATTATGCTCGTTTGCGTGGCCAC
TATTCATACATCCACCTGGTACAGAAGAAGATTAATAAGAGACCAAATGG
TGGACACGTAGTAGTGGACATATGTGGTGTTGTTCCTGACTCTAACATAT
ACCAGAAGCAAAATAATGAGTCGACTGCCAGTTTTGAGATTGGGCAGACT
CCAGTAAGACCCACGCAGCATAACTGCAAGCTCTGCCATCAGAAGTTGGG
TTATGCAACAGCCAGCAGATCTCTTGTGTACAAACCTGCTATGCTCTCAA
TGGTGGCTATTGCTGCTGTCTGTGTGTGCGTGGCTCTTCTATTTAAAAGT
GCCCTGAAAGTCTGTATGTGTTCCGTCCATTCAGATGGGAAATGCTGNAC
TATGGAACAAGCTNGAATCCCTTTNCAAGCTGAATTCCAATCAACTCTAA
CTTTGATATAACAGCTNGCTATAGGGGTTTGGGNACCTGGATGCGATTGT
AAAATGTAAATTGGAAATCTTATATAACAGGCTTGTACTGATTTCGGAGC
C
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