EY757238

Overview
NameEY757238
Unique NameEY757238
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GLRX_SOLLC (Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.085e-36
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 1
Query:   91 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAGTK 285
            M+L KA+E VS N V VFSKT CPFCVSVK+L  +LG TFKA+ELD E DGS+IQ+A  EW G +
Sbjct:    1 MSLAKAKEIVSGNPVAVFSKTYCPFCVSVKDLLSKLGATFKAVELDSEKDGSEIQAALAEWTGQR 65          

HSP 2 Score: 82.0333 bits (201), Expect = 5.085e-36
Identity = 37/43 (86.05%), Postives = 42/43 (97.67%), Query Frame = 2
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLTEAGAVAKTA 409
            Q+TVPNVFIG KHIGGCD+TTALHREGKL+PLLTEAGA+AKT+
Sbjct:   64 QRTVPNVFIGRKHIGGCDATTALHREGKLLPLLTEAGAIAKTS 106          
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GLRX_VERFO (Glutaredoxin OS=Vernicia fordii PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.465e-35
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 1
Query:   91 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAGTK 285
            MA+ KAQE VSSNSVVVFSKT CP+C SVK+L  QLG  FK IELD ESDGSD+Q+A  EW G +
Sbjct:    1 MAMIKAQELVSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSESDGSDLQNALAEWTGQR 65          

HSP 2 Score: 76.2554 bits (186), Expect = 1.465e-35
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 2
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLTEAGAV 397
            Q+TVPNVFIGGKHIGGCD TT +H+EGKL+PLLTEAGAV
Sbjct:   64 QRTVPNVFIGGKHIGGCDKTTGMHQEGKLIPLLTEAGAV 102          
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GRXC6_ORYSJ (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.326e-35
Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = 1
Query:   91 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAGTK 285
            MAL KA+ETV+S  VVV+SK+ CPFCV VK+LF+QLG TFKAIELD ESDGS++QSA  EW G +
Sbjct:    1 MALAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQR 65          

HSP 2 Score: 74.3294 bits (181), Expect = 9.326e-35
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 2
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLTEAGAVAKTA 409
            Q+TVPNVFI GKHIGGCD T AL+ EGKLVPLLTEAGA+A +A
Sbjct:   64 QRTVPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGAIASSA 106          
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GRXC2_ARATH (Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.498e-34
Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 1
Query:   91 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAGTK 285
            MA+ KA+E V+S SVVVFSKT CP+CV VKEL QQLG  FKA+ELD ESDGS IQS   EW G +
Sbjct:    1 MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQR 65          

HSP 2 Score: 74.7146 bits (182), Expect = 3.498e-34
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 2
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLTEAGAVA-KTA 409
            Q+TVPNVFIGG HIGGCD+T+ LH++GKLVPLLTEAGA+A KTA
Sbjct:   64 QRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107          
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GLRX_RICCO (Glutaredoxin OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.919e-33
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 1
Query:   91 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAGTK 285
            MA+ K +E VSSN+VVVFSKT CP+C SVK+L  QLG  +K +ELD ESDGS+IQ+A  EW G +
Sbjct:    1 MAMTKTKELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQR 65          

HSP 2 Score: 74.7146 bits (182), Expect = 4.919e-33
Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 2
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLTEAGAV 397
            Q+TVPNVFIGGKHIGGCDSTTA H +G+LVPLLTEAGAV
Sbjct:   64 QRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEAGAV 102          
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GRXC4_ORYSJ (Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXC4 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.997e-29
Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 1
Query:   64 RIKDKEDTEMALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAGTK 285
            ++++     MAL KA+E V+S+ VVVFSKT CPFC  VK L  +L  ++KA+ELD ESDGS++QSA  +W G +
Sbjct:   18 QLEEPSKPVMALDKAKEIVASSPVVVFSKTYCPFCARVKRLLAELAASYKAVELDVESDGSELQSALADWTGQR 91          

HSP 2 Score: 66.2402 bits (160), Expect = 4.997e-29
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 2
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLTEAGAVA 400
            Q+TVP VFI GKHIGGCD T A+H+ G LVPLLTEAGA+A
Sbjct:   90 QRTVPCVFIKGKHIGGCDDTMAMHKGGNLVPLLTEAGAIA 129          
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GRXC1_ARATH (Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.630e-27
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1
Query:   76 KEDTEMALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAG 279
            KE+ E+ + KA+E VS+  VVVFSKT C +C  VK+L  QLG TFK +ELD+ SDG +IQSA  EW G
Sbjct:   12 KEEMEVVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTG 79          

HSP 2 Score: 62.3882 bits (150), Expect = 2.630e-27
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 2
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLTEAGAVAKTAA 412
            Q TVPNVFI G HIGGCD     +++GKLVPLLTEAGA+A  ++
Sbjct:   80 QTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAIADNSS 123          
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GLRX_DICDI (Glutaredoxin OS=Dictyostelium discoideum GN=grxA PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.880e-21
Identity = 27/63 (42.86%), Postives = 46/63 (73.02%), Query Frame = 1
Query:   97 LPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAGTK 285
            + K +  + ++ +++FSKT CP+C+SVK+LF++L V    +ELD ESDGS++QSA  + +G +
Sbjct:    1 MDKVKALIKAHKLIIFSKTTCPYCISVKDLFKKLKVVPFVVELDLESDGSELQSAAGQISGVR 63          

HSP 2 Score: 56.9954 bits (136), Expect = 6.880e-21
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 2
Query:  266 VSGLEQKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLTEAG 391
            +SG+  +TVP VFI  K IGGCD+TT LH +GKL+PLL EAG
Sbjct:   59 ISGV--RTVPQVFINEKFIGGCDATTKLHSQGKLIPLLQEAG 98          
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GLRX2_MOUSE (Glutaredoxin-2, mitochondrial OS=Mus musculus GN=Glrx2 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.347e-15
Identity = 26/69 (37.68%), Postives = 41/69 (59.42%), Query Frame = 1
Query:   79 EDTEMALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAGTK 285
            + T   + + QET+S+N VV+FSKT C +C   K++F  + V +KA+ELD    G+  Q A  +  G +
Sbjct:   44 KSTTTPVNQIQETISNNCVVIFSKTSCSYCSMAKKIFHDMNVNYKAVELDMLEYGNQFQDALHKMTGER 112          

HSP 2 Score: 43.8986 bits (102), Expect = 3.347e-15
Identity = 17/33 (51.52%), Postives = 25/33 (75.76%), Query Frame = 2
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLL 379
            ++TVP +F+ G+ IGG   T  LH+EGKL+PL+
Sbjct:  111 ERTVPRIFVNGRFIGGAADTHRLHKEGKLLPLV 143          
BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GLRX2_BOVIN (Glutaredoxin-2, mitochondrial OS=Bos taurus GN=GLRX2 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 5.654e-15
Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 1
Query:  109 QETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSAQREWAGTK 285
            QET+S+N VV+FSKT C +C   K LF  + V +K +ELD    GS  Q A  +  G +
Sbjct:   55 QETISNNCVVIFSKTSCSYCTMAKNLFHDMNVNYKVVELDMLEYGSQFQDALHKMTGER 113          

HSP 2 Score: 43.1282 bits (100), Expect = 5.654e-15
Identity = 17/33 (51.52%), Postives = 24/33 (72.73%), Query Frame = 2
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLL 379
            ++TVP +F+ G  IGG   T  LH+EGKL+PL+
Sbjct:  112 ERTVPRIFVNGTFIGGATDTHRLHKEGKLLPLV 144          
The following BLAST results are available for this feature:
BLAST of EY757238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GLRX_SOLLC5.085e-3664.62Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1[more]
GLRX_VERFO1.465e-3569.23Glutaredoxin OS=Vernicia fordii PE=3 SV=1[more]
GRXC6_ORYSJ9.326e-3569.23Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN... [more]
GRXC2_ARATH3.498e-3467.69Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 P... [more]
GLRX_RICCO4.919e-3361.54Glutaredoxin OS=Ricinus communis PE=3 SV=1[more]
GRXC4_ORYSJ4.997e-2951.35Glutaredoxin-C4, chloroplastic OS=Oryza sativa sub... [more]
GRXC1_ARATH2.630e-2757.35Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 P... [more]
GLRX_DICDI6.880e-2142.86Glutaredoxin OS=Dictyostelium discoideum GN=grxA P... [more]
GLRX2_MOUSE3.347e-1537.68Glutaredoxin-2, mitochondrial OS=Mus musculus GN=G... [more]
GLRX2_BOVIN5.654e-1544.07Glutaredoxin-2, mitochondrial OS=Bos taurus GN=GLR... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-019-A08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757238 ID=EY757238; Name=EY757238; organism=Citrus sinensis; type=EST; length=717bp
CCACGCGTCCGCCGCTTGTATACCCAAAGAGGATTTGAAGCTTATTTAGG
GTTTGTGAGATTTCGAATCAAAGACAAAGAAGACACAGAAATGGCTTTGC
CCAAGGCCCAGGAAACCGTTTCCTCCAATTCCGTCGTCGTTTTCAGCAAA
ACGCTTTGTCCGTTCTGCGTGAGTGTCAAAGAGCTGTTTCAGCAACTCGG
AGTCACTTTCAAGGCCATTGAACTGGACAAAGAAAGTGATGGAAGTGACA
TTCAATCAGCTCAACGTGAGTGGGCTGGAACAAAAAACTGTTCCAAATGT
CTTCATCGGAGGGAAACACATTGGTGGCTGCGATTCAACTACTGCACTGC
ACAGGGAAGGGAAGCTGGTTCCTCTGCTCACTGAAGCTGGAGCTGTTGCC
AAGACAGCTGCCTAAGGGATGGCTATTCTCTGCCTGTTTATGCTAGTAAT
AAATAAACAATGTGTTGGTAGTGCTTAATCTGTCTGAATTAAATATGAAA
TTATGCTTATTTGAGTAATTTCCAATGCACTTTTTTGTTCAGTTTCTGTT
TTATGTTGAAATCTGTATGAATTTTATCAGATTTTCCATCTACTATATCC
ATGTAGAGTCATTTCTGCTGTAAATTATTTCAGTGTCCTTGCTATAGATC
ATTTTTTGTCTTTGGTGAAAANTATNNNTTNNNNNACTATNNNANAAAAA
ATAATNAATAAAAAGGG
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