EY757231

Overview
NameEY757231
Unique NameEY757231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY757231 vs. ExPASy Swiss-Prot
Match: RK35_SPIOL (50S ribosomal protein L35, chloroplastic OS=Spinacia oleracea GN=RPL35 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 6.937e-13
Identity = 35/68 (51.47%), Postives = 40/68 (58.82%), Query Frame = 3 
Query:  282 K*KPNKASAKRFKVTGKGKILRRRAGXXXXXXXXXXXXXXXXXXMHEASRSDYDNVISCLQYHKDNRK 485
            K K +KASAKRF+VTGKGKI+RRRAG                  + +  RSDYDNVI  L Y K NRK
Sbjct:   91 KMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKNRLSKLIQVDRSDYDNVIGALPYLKVNRK 158

HSP 2 Score: 31.9574 bits (71), Expect = 6.937e-13
Identity = 17/38 (44.74%), Postives = 27/38 (71.05%), Query Frame = 2 
Query:  194 PLLLRHNNLPT---TVTQNRPQTVTVFAAKGYKMKTQQ 298
            P++L++  + T   +V+ + P + TVFAAKGYKMKT +
Sbjct:   60 PIVLKNKRISTVDSSVSTSSP-SFTVFAAKGYKMKTHK 96
The following BLAST results are available for this feature:
BLAST of EY757231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RK35_SPIOL6.937e-1351.4750S ribosomal protein L35, chloroplastic OS=Spinac... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-019-A01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757231 ID=EY757231; Name=EY757231; organism=Citrus sinensis; type=EST; length=882bp
AAAAAGGGANGTGNNCGAAAACGAANCTGCCGAAAAAAAGGGTTCNANGA
TATCTTTCAATTTAAAATTTTGCCCAATATGCCTTTCTCCCCACTAAGAG
AGAGCCTCTCGTGGGTCATCACTCCGACTGGATCTATCCAACAAGCTTAA
CAACTCGCTCAGACTCAATTCAAGCTACAGCATTTGCGACTCTCCTTTAC
TCTTACGTCATAACAACTTACCCACAACAGTTACTCAAAATAGGCCTCAA
ACGGTCACTGTTTTTGCCGCAAAAGGTTACAAAATGAAAACCCAACAAGG
CATCCGCGAAGAGGTTTAAGGTGACTGGTAAAGGAAAAATATTGAGGAGG
AGAGCTGGAAAGCAGCATTTATTAGCTAAGAAAAAAACTAAGAGAAAATT
ACGCATCTCTAAAATGCACGAAGCTAGTCGAAGTGACTACGACAATGTTA
TAAGTTGCTTGCAATATCACAAGGATAACAGGAAAGAAAAGAAGAGTGAT
TTCAAAAGGTGGAGAAGAACATAGAGAATATCCGTTATGCAAGAAAACTG
AATATAACAACATTAGTATGTTTGGTAAAAAGAAATGAAAACAAAGGCTT
TATGTAGAAGAATGGGTCAAAACACAACAAGAAGAAAAAGGGGGGGGGGC
GAATAGAGCCACAAACATAAGATACGCGGGATTCAACGGACAAACAACTA
TATATGAGACCACAAATACATAATAAGGGGAGCATGAGAAACAAAAAAGA
GGGAAAAAACGATGGAGAAACGAAAAAAATAGAGGTAAAAAAATAACAAT
AATTCAATGGGAGGAATAATATAAGGAGAGGAAGATTTATACTAAATTAA
TAATATAATATGGAACAAAAAGGGAAGGTGCA
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