EY757193

Overview
NameEY757193
Unique NameEY757193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10001 contig Csv1_Contig10001:469..1373. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_ARATH (NEDD8-activating enzyme E1 catalytic subunit OS=Arabidopsis thaliana GN=ECR1 PE=1 SV=2)

HSP 1 Score: 401.364 bits (1030), Expect = 3.736e-111
Identity = 197/275 (71.64%), Postives = 218/275 (79.27%), Query Frame = 3
Query:    6 RPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVHSGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVXWSGGLIELTLQLL*KSHLST*E-HP*LXVAK 827
            +PKAEVAAKRVMERVSGV IVPHF RIEDK+I FYNDFNII LGLDSIEAR YIN VAC FLEY  DD P+ ETIKPMVDGGTEGFKGHARVI+PGVTPCFECTI+LFPPQVKFPLCTLAETPR AAHCIEYAHLI+W+ VH GK+FDPD+PEHM+WVY EA++RAELFGIPGVTYSLTQGVVK                CALETLKI S CSKTL NYLTYNG  GL+ +VT+F +D +CLV   G LIEL   +     +   E HP L ++K
Sbjct:   99 KPKAEVAAKRVMERVSGVEIVPHFSRIEDKEIEFYNDFNIIALGLDSIEARKYINGVACGFLEYNEDDTPKRETIKPMVDGGTEGFKGHARVILPGVTPCFECTIYLFPPQVKFPLCTLAETPRNAAHCIEYAHLIQWETVHRGKTFDPDEPEHMKWVYDEAIRRAELFGIPGVTYSLTQGVVKNIIPAIASTNAIISAACALETLKIVSACSKTLVNYLTYNGGEGLYTEVTKFERDTECLVCGPGILIELDTSVTLSKFIEMLEDHPKLLLSK 373          
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_DROME (NEDD8-activating enzyme E1 catalytic subunit OS=Drosophila melanogaster GN=CG13343 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.079e-61
Identity = 114/241 (47.30%), Postives = 153/241 (63.49%), Query Frame = 3
Query:   12 KAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVHS-GKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCL 731
            KAE AA+ +  RV    + PHF +I+D D SFY  F+++V GLDSI AR +IN +  S L YE D      +I PM+DGGTEGFKG+ARVI+PG T C ECT+ LFPPQV +PLCT+A TPR   HCIEY  +I+W++ +  G   D DDP+H+ W+Y  A++R+  F I GVTY L QGVVK                CALE  K+A+ C  +++NYL +N + G++    E  K ++CL
Sbjct:  103 KAECAARFINARVPTCRVTPHFKKIQDFDESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYEEDGTIDTSSIVPMIDGGTEGFKGNARVILPGFTACIECTLDLFPPQVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPFGVPLDGDDPQHIGWIYERALERSNEFNITGVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAEKSENCL 343          
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_RAT (NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus GN=Uba3 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.760e-60
Identity = 117/244 (47.95%), Postives = 156/244 (63.93%), Query Frame = 3
Query:    6 RPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH---SGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDC 728
            RPKAEVAA+ + +RV   N+VPHF +I+D + +FY  F+IIV GLDSI AR +IN +  S L YE D      +I P++DGGTEGFKG+ARVI+PG+T C ECT+ L+PPQV FP+CT+A  PR   HCIEY  +++W +      G   D DDPEH+QW++ ++V+RA  + I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C
Sbjct:  122 RPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGDGVPLDGDDPEHIQWIFQKSVERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENC 364          
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_CAEEL (NEDD8-activating enzyme E1 catalytic subunit OS=Caenorhabditis elegans GN=uba-3 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.760e-60
Identity = 119/251 (47.41%), Postives = 148/251 (58.96%), Query Frame = 3
Query:    6 RPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDE--VHSGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVXWSGGL 752
            + KAEVAA  V +RV G  +  H CRIEDK   FY  F+II+ GLDSI AR +IN + C  +    D KP E TI PM+DGGTEGFKG+ARVI P  T C +CT+ L+PPQV FPLCT+A TPR   HCIEY  ++ W E     G S D DDP H++WV   A  RAE + I GV   LT GV+K                CALE LK+A+  +K + NYL +  + G +  V   +KD +CL    G L
Sbjct:   95 KSKAEVAAAFVQQRVVGCQVTAHNCRIEDKGQEFYRKFSIIICGLDSIPARRWINGMLCDLVLEMADGKPDENTIIPMIDGGTEGFKGNARVIYPKFTACIDCTLDLYPPQVNFPLCTIAHTPRLPEHCIEYIKVVVWPEEKPFEGVSLDADDPIHVEWVLERASLRAEKYNIRGVDRRLTSGVLKRIIPAVASTNAVIAASCALEALKLATNIAKPIDNYLNFTQIHGAYTSVVSMMKDDNCLTCSGGRL 345          
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_MOUSE (NEDD8-activating enzyme E1 catalytic subunit OS=Mus musculus GN=Uba3 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.298e-60
Identity = 116/244 (47.54%), Postives = 156/244 (63.93%), Query Frame = 3
Query:    6 RPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH---SGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDC 728
            RPKAEVAA+ + +RV   N+VPHF +I+D + +FY  F+IIV GLDSI AR +IN +  S L YE D      +I P++DGGTEGFKG+ARVI+PG+T C ECT+ L+PPQV FP+CT+A  PR   HCIEY  +++W +      G   D DDPEH+QW++ ++++RA  + I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C
Sbjct:  122 RPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGDGVPLDGDDPEHIQWIFQKSIERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENC 364          
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_PONAB (NEDD8-activating enzyme E1 catalytic subunit OS=Pongo abelii GN=UBA3 PE=2 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 3.920e-60
Identity = 116/244 (47.54%), Postives = 156/244 (63.93%), Query Frame = 3
Query:    6 RPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH---SGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDC 728
            RPKAEVAA+ + +RV   N+VPHF +I+D + +FY  F+IIV GLDSI AR +IN +  S L YE D      +I P++DGGTEGFKG+ARVI+PG+T C ECT+ L+PPQV FP+CT+A  PR   HCIEY  +++W +      G   D DDPEH+QW++ ++++RA  + I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C
Sbjct:  122 RPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVVAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENC 364          
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_HUMAN (NEDD8-activating enzyme E1 catalytic subunit OS=Homo sapiens GN=UBA3 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 3.920e-60
Identity = 116/244 (47.54%), Postives = 156/244 (63.93%), Query Frame = 3
Query:    6 RPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH---SGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDC 728
            RPKAEVAA+ + +RV   N+VPHF +I+D + +FY  F+IIV GLDSI AR +IN +  S L YE D      +I P++DGGTEGFKG+ARVI+PG+T C ECT+ L+PPQV FP+CT+A  PR   HCIEY  +++W +      G   D DDPEH+QW++ ++++RA  + I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C
Sbjct:  122 RPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENC 364          
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_DANRE (NEDD8-activating enzyme E1 catalytic subunit OS=Danio rerio GN=uba3 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.541e-59
Identity = 114/244 (46.72%), Postives = 155/244 (63.52%), Query Frame = 3
Query:    6 RPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDE---VHSGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDC 728
            RPKAEVAA  V +RV G ++VPHF +I+D D +FY  F+I+V GLDS+ AR ++N +  S L YE D      +I P++DGGTEGFKG+ARVI+PG+T C +CT+ L+PPQ+ FP+CT+A  PR   HC+EY  ++ W +      G   D DDP+H+QWVY ++++RA  F I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C
Sbjct:  121 RPKAEVAADFVNDRVPGCSVVPHFKKIQDLDETFYRQFHIVVCGLDSVIARRWMNGMLLSLLIYE-DGVLDPSSIIPLIDGGTEGFKGNARVILPGMTACIDCTLELYPPQINFPMCTIASMPRLPEHCVEYVRMLLWPKEKPFGDGVVLDGDDPKHIQWVYQKSLERAAEFNITGVTYRLTQGVVKRIIPAVASTNAVIAAACATEVFKIATSAYVPLNNYLVFNDVDGLYTYTFEAERKENC 363          
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_DICDI (NEDD8-activating enzyme E1 catalytic subunit OS=Dictyostelium discoideum GN=uba3 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.993e-56
Identity = 108/248 (43.55%), Postives = 146/248 (58.87%), Query Frame = 3
Query:    6 RPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVHSGKSFDP-----DDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLV 734
            + KAEVAA  +  R++G N+ PH CRI+DKD  +Y  F I++ GLDSIEAR +IN +  + +          +TI P+VDGGTEGFKG ARVI+P ++ CFEC++  FPPQV + +CT+A TPR   HCI++A L    +    K FDP     D+P+HM W++  A KRAE F I GVTY LTQGV K                C  E  K  +  S  L+NY+ YNG+ G++    E+   + C V
Sbjct:  102 KSKAEVAAAFINSRITGCNVTPHKCRIQDKDEDYYRQFKIVIAGLDSIEARRWINGLLVNLVVVNDSGDIEPDTIIPLVDGGTEGFKGQARVILPKISSCFECSLDAFPPQVSYAICTIANTPRVPEHCIQWALLFGLQDATLEKPFDPKQFDNDNPDHMNWLFECAKKRAEKFNINGVTYKLTQGVAKNIIPAIASTNAIIAAACCNEVFKFCTDSSGYLNNYMMYNGLNGVYTFTFEYEIKEGCAV 349          
BLAST of EY757193 vs. ExPASy Swiss-Prot
Match: UBA3_SCHPO (NEDD8-activating enzyme E1 catalytic subunit OS=Schizosaccharomyces pombe GN=uba3 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.553e-43
Identity = 92/263 (34.98%), Postives = 138/263 (52.47%), Query Frame = 3
Query:    9 PKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIWLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH-------------------SGKSFDPDDPEHMQWVYSEAVKRAELFGIP--GVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASXCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLV 734
            PKA VAA  +M+R+    + P + +I+DK I FY +F +I+ GLDS+EAR +IN+   +  +  T D      + P+VDGG+EG KG ARVIIP +T C+EC++ +  P++ +P+CTLA TPR   HC+E+A+L++W  V                       +F+PD+  H+ W+   +++RA  F IP   +     QG+VK                C  E LKI +  +  L NY+ Y G  G +       K  DC V
Sbjct:   98 PKANVAASMIMKRIPSTVVTPFYGKIQDKTIEFYKEFKLIICGLDSVEARRWINSTLVAIAK--TGD------LIPLVDGGSEGLKGQARVIIPTITSCYECSLDMLTPKISYPICTLANTPRLPEHCVEWAYLLEWPRVFLNASVDSFSKQEVFEPLDGKNSNFEPDNIRHIDWLVKRSIERANKFQIPSSSINRFFVQGIVKRIIPAVASTNAIIAASCCNEALKILTESNPFLDNYMMYVGEDGAYTYTFNLEKRSDCPV 352          
The following BLAST results are available for this feature:
BLAST of EY757193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
UBA3_ARATH3.736e-11171.64NEDD8-activating enzyme E1 catalytic subunit OS=Ar... [more]
UBA3_DROME2.079e-6147.30NEDD8-activating enzyme E1 catalytic subunit OS=Dr... [more]
UBA3_RAT1.760e-6047.95NEDD8-activating enzyme E1 catalytic subunit OS=Ra... [more]
UBA3_CAEEL1.760e-6047.41NEDD8-activating enzyme E1 catalytic subunit OS=Ca... [more]
UBA3_MOUSE2.298e-6047.54NEDD8-activating enzyme E1 catalytic subunit OS=Mu... [more]
UBA3_PONAB3.920e-6047.54NEDD8-activating enzyme E1 catalytic subunit OS=Po... [more]
UBA3_HUMAN3.920e-6047.54NEDD8-activating enzyme E1 catalytic subunit OS=Ho... [more]
UBA3_DANRE2.541e-5946.72NEDD8-activating enzyme E1 catalytic subunit OS=Da... [more]
UBA3_DICDI9.993e-5643.55NEDD8-activating enzyme E1 catalytic subunit OS=Di... [more]
UBA3_SCHPO2.553e-4334.98NEDD8-activating enzyme E1 catalytic subunit OS=Sc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-E07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757193 ID=EY757193; Name=EY757193; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGAAGGCAGAGGTGGCAGCAAAGCGTGTCATGGAGAGAGTT
AGTGGTGTAAATATTGTCCCACATTTTTGCCGAATTGAGGATAAAGACAT
TTCATTTTACAATGATTTTAATATCATTGTCCTTGGTCTCGATTCCATCG
AGGCTCGGAGCTATATAAATGCTGTAGCATGTAGTTTTCTTGAATATGAG
ACTGATGACAAGCCACGAGAAGAAACAATCAAACCCATGGTAGATGGGGG
TACTGAAGGTTTTAAGGGTCATGCAAGGGTTATTATACCAGGAGTCACAC
CGTGCTTTGAGTGTACCATCTGGCTTTTCCCCCCTCAAGTGAAGTTTCCT
TTATGCACTCTTGCGGAAACCCCTAGAACAGCTGCTCATTGTATTGAATA
TGCCCATTTAATCAAGTGGGATGAGGTGCACAGTGGAAAGTCTTTTGATC
CAGATGACCCGGAACATATGCAGTGGGTCTATTCCGAGGCCGTCAAGAGA
GCTGAGCTTTTTGGCATTCCTGGAGTTACATATTCTCTGACTCAGGGTGT
TGTGAAAAACATCATACCAGCTATTGCTTCCACCAATGCAATTATATCAG
CAGCATGTGCTCTTGAAACATTGAAGATTGCATCANGATGCAGCAAAACT
CTATCGAATTATCTAACTTATAATGGTGTTGCAGGTCTACACATAAAAGT
TACTGAATTCGTGAAGGACAAGGACTGTCTTGTATNGTGGTCAGGTGGTC
TTATTGAATTGACACTTCAGTTACTCTAGAAAAGTCATTTATCTACTTGA
GAGCATCCCTAGCTGNCAGTAGCAAAGCAGTGTCCCATACCAGGGAANGA
TCTGTACTGCAGGCTCCTCAGNTCTGGAGAGATGACCATCAACCTAAGCT
ACAC
back to top